POPTR_0010s03730 (Populus trichocarpa)
ABF1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04684 (BAF1_ABF1) IPR006774 POPTR_0010s03730 T000064_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0010s03730.1 ABF1 22 167

Links

Other ABF1 family TFs
Other Populus trichocarpa TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SapurV1A.0656s0120 Salix purpurea SapurV1A.0656s0120 N 0.917
SapurV1A.0022s0280 Salix purpurea SapurV1A.0022s0280 N 0.886
TCM_020537 Theobroma cacao TCM_020537 N 0.874
chr1.CM0544.480.nd Lotus japonicus chr1.CM0544.480.nd N 0.824
Gorai.005G040900 Gossypium raimondii Gorai.005G040900 N 0.789
Lus10021934.g Linum usitatissimum Lus10021934.g N 0.773
VIT_05s0020g02790 Vitis vinifera VIT_05s0020g02790 N 0.765
gene05925-v1.0-hybrid Fragaria vesca gene05925-v1.0-hybrid N 0.765
MDP0000699761 Malus domestica MDP0000699761 N 0.746
MDP0000539118 Malus domestica MDP0000539118 N 0.746
Pm008000 Prunus mume Pm008000 N 0.712
PRUPE_ppa010187mg Prunus persica PRUPE_ppa010187mg N 0.712