CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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cassava18227.valid.m1
(
Manihot esculenta
)
ABF1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04684 (BAF1_ABF1)
IPR006774
cassava18227.valid.m1
T000092_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
cassava18227.valid.m1
ABF1
42
174
MASGTPATAVPSPTQPPSTFSNSTHQLTYQQSQHFHHQQQQQQLQMFWANQMEEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDV
Links
Other
ABF1
family TFs
Other
Manihot esculenta
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
cassava30750.valid.m1
Manihot esculenta
cassava30750.valid.m1
N
0.942
SapurV1A.0103s0030
Salix purpurea
SapurV1A.0103s0030
N
0.852
Gorai.004G242200
Gossypium raimondii
Gorai.004G242200
N
0.719