CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.004G242200
(
Gossypium raimondii
)
ABF1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04684 (BAF1_ABF1)
IPR006774
Gorai.004G242200
T000097_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.004G242200.1
ABF1
23
170
YGTNPYQNQVTGTAPNPGSVVTSVGGIQSTGQPTGAQLAQHQLAYQQIHHQQQQQLQQQLQAFWANQYQEIEKVTDFKNHNLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTD
Gorai.004G242200.2
ABF1
23
170
YGTNPYQNQVTGTAPNPGSVVTSVGGIQSTGQPTGAQLAQHQLAYQQIHHQQQQQLQQQLQAFWANQYQEIEKVTDFKNHNLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTD
Gorai.004G242200.3
ABF1
23
170
YGTNPYQNQVTGTAPNPGSVVTSVGGIQSTGQPTGAQLAQHQLAYQQIHHQQQQQLQQQLQAFWANQYQEIEKVTDFKNHNLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTD
Gorai.004G242200.4
ABF1
23
170
YGTNPYQNQVTGTAPNPGSVVTSVGGIQSTGQPTGAQLAQHQLAYQQIHHQQQQQLQQQLQAFWANQYQEIEKVTDFKNHNLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTD
Gorai.004G242200.5
ABF1
23
170
YGTNPYQNQVTGTAPNPGSVVTSVGGIQSTGQPTGAQLAQHQLAYQQIHHQQQQQLQQQLQAFWANQYQEIEKVTDFKNHNLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTD
Gorai.004G242200.6
ABF1
23
170
YGTNPYQNQVTGTAPNPGSVVTSVGGIQSTGQPTGAQLAQHQLAYQQIHHQQQQQLQQQLQAFWANQYQEIEKVTDFKNHNLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTD
Gorai.004G242200.7
ABF1
23
170
YGTNPYQNQVTGTAPNPGSVVTSVGGIQSTGQPTGAQLAQHQLAYQQIHHQQQQQLQQQLQAFWANQYQEIEKVTDFKNHNLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTD
Gorai.004G242200.8
ABF1
23
170
YGTNPYQNQVTGTAPNPGSVVTSVGGIQSTGQPTGAQLAQHQLAYQQIHHQQQQQLQQQLQAFWANQYQEIEKVTDFKNHNLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTD
Links
Other
ABF1
family TFs
Other
Gossypium raimondii
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy