chr1.CM0544.480.nd (Lotus japonicus)
ABF1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04684 (BAF1_ABF1) IPR006774 chr1.CM0544.480.nd T000120_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
chr1.CM0544.480.nd ABF1 31 167

Links

Other ABF1 family TFs
Other Lotus japonicus TFs

13 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
POPTR_0010s03730 Populus trichocarpa POPTR_0010s03730 N 0.824
SapurV1A.0656s0120 Salix purpurea SapurV1A.0656s0120 N 0.808
SapurV1A.0022s0280 Salix purpurea SapurV1A.0022s0280 N 0.792
TCM_020537 Theobroma cacao TCM_020537 N 0.772
VIT_05s0020g02790 Vitis vinifera VIT_05s0020g02790 N 0.768
gene05925-v1.0-hybrid Fragaria vesca gene05925-v1.0-hybrid N 0.760
Gorai.005G040900 Gossypium raimondii Gorai.005G040900 N 0.722
Pm008000 Prunus mume Pm008000 N 0.720
PRUPE_ppa010187mg Prunus persica PRUPE_ppa010187mg N 0.720
Lus10021934.g Linum usitatissimum Lus10021934.g N 0.712
PGSC0003DMG400003357 Solanum tuberosum PGSC0003DMG400003357 N 0.712
MDP0000539118 Malus domestica MDP0000539118 N 0.708
MDP0000699761 Malus domestica MDP0000699761 N 0.708