Al_scaffold_0002_210 (Arabidopsis lyrata)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Al_scaffold_0002_210 T000319_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT1G63040
M06590_2.00
Arabidopsis thaliana
TTGAAA

TTTCAA
Dap-seq
OMalley et al.(2016)
AT1G63040_col_a
0.741 0.980
ERF027
M06566_2.00
Arabidopsis thaliana
NNNNNNHNNHNYYRCCGACAN

NTGTCGGYRRNDNNDNNNNNN
Dap-seq
OMalley et al.(2016)
AT1G12630_col_a
0.704 0.878
ERF027
M06567_2.00
Arabidopsis thaliana
NNYYRCCGACANHNNN

NNNDNTGTCGGYRRNN
Dap-seq
OMalley et al.(2016)
AT1G12630_colamp_a
0.704 0.878
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Al_scaffold_0002_210 AP2 88 138

Links

Other AP2 family TFs
Other Arabidopsis lyrata TFs

29 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Lus10033060.g Linum usitatissimum Lus10033060.g N 0.000