AMTR_s00007p00053050 (Amborella trichopoda)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 AMTR_s00007p00053050 T000333_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
abi4
M02648_2.00 		Zea mays
CGSYGCYBYB
VRVRGCRSCG		 SELEX
Mathelier et al.(2014)
MA0123.1 		0.721 0.880
abi4
M09706_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABI4_01 		0.721 0.880
PK08602.1
M01098_2.00 		Cannabis sativa
NYCACCGCYN
NRGCGGTGRN		 PBM
Lambert et al.(2019)
pTH11421 		0.683 0.780
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ERN05216 AP2 84 135

Links

Other AP2 family TFs
Other Amborella trichopoda TFs

66 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
evm.TU.supercontig_1288.2 Carica papaya evm.TU.supercontig_1288.2 I 0.775
Gorai.011G291900 Gossypium raimondii Gorai.011G291900 I 0.753
Lus10009834.g Linum usitatissimum Lus10009834.g I 0.741
Ca_12465 Cicer arietinum Ca_12465 I 0.741
cassava20838.m1 Manihot esculenta cassava20838.m1 I 0.741
Cla006708 Citrullus lanatus Cla006708 I 0.741
MDP0000628484 Malus domestica MDP0000628484 I 0.741
Lus10040944.g Linum usitatissimum Lus10040944.g I 0.741
chr2.CM0002.60.nc Lotus japonicus chr2.CM0002.60.nc I 0.741
GSMUA_Achr9G18060_001 Musa acuminata GSMUA_Achr9G18060_001 I 0.738
MTR_5g082950 Medicago truncatula MTR_5g082950 I 0.738
GSMUA_Achr3G10100_001 Musa acuminata GSMUA_Achr3G10100_001 I 0.738
SapurV1A.0650s0090 Salix purpurea SapurV1A.0650s0090 I 0.736
GSMUA_Achr5G07400_001 Musa acuminata GSMUA_Achr5G07400_001 I 0.736
Cagra.7053s0005 Capsella grandiflora Cagra.7053s0005 I 0.732
TCM_042471 Theobroma cacao TCM_042471 I 0.732
ABI4 Arabidopsis lyrata Al_scaffold_0004_2621 I 0.732
PRUPE_ppa015230mg Prunus persica PRUPE_ppa015230mg I 0.732
POPTR_0008s07120 Populus trichocarpa POPTR_0008s07120 I 0.732
Thhalv10017614m.g Eutrema salsugineum Thhalv10017614m.g I 0.732
Carubv10025253m.g Capsella rubella Carubv10025253m.g I 0.732
29814.m000739 Ricinus communis 29814.m000739 I 0.732
Ciclev10033578m.g Citrus clementina Ciclev10033578m.g I 0.732
PGSC0003DMG400041883 Solanum tuberosum PGSC0003DMG400041883 I 0.732
cassava41265.m1 Manihot esculenta cassava41265.m1 I 0.732
ABI4 Arabidopsis thaliana AT2G40220 I 0.732
Pm018953 Prunus mume Pm018953 I 0.732
Bo3g034810 Brassica oleracea Bo3g034810 I 0.732
orange1.1g038194m.g Citrus sinensis orange1.1g038194m.g I 0.732
PGSC0003DMG400034739 Solanum tuberosum PGSC0003DMG400034739 I 0.732
GLYMA14G06290 Glycine max GLYMA14G06290 I 0.732
GLYMA02G43240 Glycine max GLYMA02G43240 I 0.732
Bra000178 Brassica rapa Bra000178 I 0.732
Bra004978 Brassica rapa Bra004978 I 0.732
MDP0000225376 Malus domestica MDP0000225376 I 0.732
SapurV1A.0061s0480 Salix purpurea SapurV1A.0061s0480 I 0.732
Bo4g025410 Brassica oleracea Bo4g025410 I 0.732
gene21003-v1.0-hybrid Fragaria vesca gene21003-v1.0-hybrid I 0.732
Bostr.23794s0036 Boechera stricta Bostr.23794s0036 I 0.732
mgf024416m Mimulus guttatus mgf024416m I 0.729
POPTR_0010s19370 Populus trichocarpa POPTR_0010s19370 I 0.728
ABI4 Vitis vinifera VIT_13s0067g01400 I 0.722
Pavir.J38620 Panicum virgatum Pavir.J38620 I 0.721
Pavir.J29572 Panicum virgatum Pavir.J29572 I 0.721
Pavir.J33237 Panicum virgatum Pavir.J33237 I 0.721
Sb09g016550 Sorghum bicolor Sb09g016550 I 0.721
OMERI05G11540 Oryza meridionalis OMERI05G11540 I 0.721
OGLUM05G13600 Oryza glumaepatula OGLUM05G13600 I 0.721
abi4 Zea mays GRMZM2G093595 D 0.721
BGIOSGA018232 Oryza indica BGIOSGA018232 I 0.721
ONIVA05G13490 Oryza nivara ONIVA05G13490 I 0.721
LPERR05G10140 Leersia perrieri LPERR05G10140 I 0.721
OPUNC05G11000 Oryza punctata OPUNC05G11000 I 0.721
ABI4 Oryza sativa OS05G0351200 I 0.721
ORGLA05G0109500 Oryza glaberrima ORGLA05G0109500 I 0.721
Cucsa.336890 Cucumis sativus Cucsa.336890 I 0.688
Cla017778 Citrullus lanatus Cla017778 I 0.688
Bo6g073020 Brassica oleracea Bo6g073020 I 0.687
PK08602.1 Cannabis sativa PK08602.1 D 0.683
Aquca_009_00282 Aquilegia coerulea Aquca_009_00282 I 0.683
Bo4g111040 Brassica oleracea Bo4g111040 I 0.682
Bra014617 Brassica rapa Bra014617 I 0.682
AMTR_s00022p00250320 Amborella trichopoda AMTR_s00022p00250320 I 0.681
Bra007341 Brassica rapa Bra007341 I 0.678
Bo8g092010 Brassica oleracea Bo8g092010 I 0.678
Thhalv10006489m.g Eutrema salsugineum Thhalv10006489m.g I 0.677