AMTR_s00007p00268460 (Amborella trichopoda)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 AMTR_s00007p00268460 T000335_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF018
M00842_2.00 		Arabidopsis thaliana
HRCCGDCMN
NKGHCGGYD		 PBM
Franco-Zorrilla et al.(2014)
ORA47 		0.678 0.780
ERF018
M01610_2.00 		Arabidopsis thaliana
NRCCGNCHN
NDGNCGGYN		 PBM
Weirauch et al.(2014)
pTH7215 		0.678 0.780
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ERN05581 AP2 29 80

Links

Other AP2 family TFs
Other Amborella trichopoda TFs

67 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00007p00268280 Amborella trichopoda AMTR_s00007p00268280 I 0.711
Cucsa.055920 Cucumis sativus Cucsa.055920 I 0.707
Cla022291 Citrullus lanatus Cla022291 I 0.707
PGSC0003DMG400030781 Solanum tuberosum PGSC0003DMG400030781 I 0.706
Solyc06g054630.1 Solanum lycopersicum Solyc06g054630.1 I 0.706
Ca_09124 Cicer arietinum Ca_09124 I 0.697
Eucgr.C03175 Eucalyptus grandis Eucgr.C03175 I 0.696
Aquca_076_00040 Aquilegia coerulea Aquca_076_00040 I 0.696
AMTR_s00025p00218200 Amborella trichopoda AMTR_s00025p00218200 N 0.696
Carubv10001903m.g Capsella rubella Carubv10001903m.g I 0.694
scaffold_602234.1 Arabidopsis lyrata scaffold_602234.1 I 0.694
Bostr.26527s0082 Boechera stricta Bostr.26527s0082 I 0.694
Bra002377 Brassica rapa Bra002377 I 0.694
MDP0000649022 Malus domestica MDP0000649022 I 0.694
Bo9g149820 Brassica oleracea Bo9g149820 I 0.694
MTR_1g014800 Medicago truncatula MTR_1g014800 I 0.693
MTR_3g105510 Medicago truncatula MTR_3g105510 I 0.693
MTR_3g105480 Medicago truncatula MTR_3g105480 I 0.693
GLYMA04G06095 Glycine max GLYMA04G06095 I 0.691
GLYMA06G06101 Glycine max GLYMA06G06101 I 0.691
Si008104m.g Setaria italica Si008104m.g I 0.690
Bra020162 Brassica rapa Bra020162 I 0.690
Thhalv10015465m.g Eutrema salsugineum Thhalv10015465m.g I 0.688
chr5.CM0040.40.nd Lotus japonicus chr5.CM0040.40.nd I 0.687
Lus10034885.g Linum usitatissimum Lus10034885.g I 0.687
Lus10033420.g Linum usitatissimum Lus10033420.g I 0.687
ERF016 Arabidopsis thaliana AT5G21960 I 0.687
Solyc12g009240.1 Solanum lycopersicum Solyc12g009240.1 I 0.686
PGSC0003DMG400002899 Solanum tuberosum PGSC0003DMG400002899 I 0.686
MTR_1g014860 Medicago truncatula MTR_1g014860 I 0.685
MTR_2g043050 Medicago truncatula MTR_2g043050 I 0.685
Bra006599 Brassica rapa Bra006599 I 0.685
MTR_1g014820 Medicago truncatula MTR_1g014820 I 0.685
Bo3g015600 Brassica oleracea Bo3g015600 I 0.685
Cucsa.141980 Cucumis sativus Cucsa.141980 I 0.684
Cla011318 Citrullus lanatus Cla011318 I 0.684
Ca_01683 Cicer arietinum Ca_01683 I 0.684
Gorai.010G091100 Gossypium raimondii Gorai.010G091100 I 0.684
POPTR_0006s14100 Populus trichocarpa POPTR_0006s14100 I 0.684
cassava25057.valid.m1 Manihot esculenta cassava25057.valid.m1 I 0.684
Lus10038082.g Linum usitatissimum Lus10038082.g I 0.683
Lus10009798.g Linum usitatissimum Lus10009798.g I 0.683
PRUPE_ppa011336mg Prunus persica PRUPE_ppa011336mg I 0.683
mgf021940m Mimulus guttatus mgf021940m I 0.683
29739.m003716 Ricinus communis 29739.m003716 I 0.683
Pm027117 Prunus mume Pm027117 I 0.683
Bo8g102870 Brassica oleracea Bo8g102870 I 0.682
Bo2g023630 Brassica oleracea Bo2g023630 I 0.682
Bra031069 Brassica rapa Bra031069 I 0.682
Thhalv10009812m.g Eutrema salsugineum Thhalv10009812m.g I 0.681
Eucgr.C00780 Eucalyptus grandis Eucgr.C00780 I 0.681
Eucgr.C03297 Eucalyptus grandis Eucgr.C03297 I 0.681
GLYMA17G05240 Glycine max GLYMA17G05240 I 0.681
TCM_037486 Theobroma cacao TCM_037486 I 0.680
ORA47 Vitis vinifera VIT_04s0008g02230 I 0.680
Pavir.Aa00296 Panicum virgatum Pavir.Aa00296 I 0.680
Traes_6DL_FA861D610 Triticum aestivum Traes_6DL_FA861D610 I 0.680
evm.TU.supercontig_266.5 Carica papaya evm.TU.supercontig_266.5 I 0.680
Si019636m.g Setaria italica Si019636m.g I 0.680
GLYMA13G17250 Glycine max GLYMA13G17250 I 0.679
ERF018 Arabidopsis thaliana AT1G74930 D 0.678
Solyc07g042230.1 Solanum lycopersicum Solyc07g042230.1 N 0.678
Bostr.3288s0141 Boechera stricta Bostr.3288s0141 I 0.678
POPTR_0006s14090 Populus trichocarpa POPTR_0006s14090 I 0.678
ORA47 Arabidopsis lyrata fgenesh2_kg.2__1761__AT1G74930.1 I 0.678
mgf024162m Mimulus guttatus mgf024162m I 0.677
Cucsa.271180 Cucumis sativus Cucsa.271180 I 0.677