AMTR_s00023p00044590 (Amborella trichopoda)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 AMTR_s00023p00044590 T000357_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK07402.1
M01097_2.00
Cannabis sativa
NVRCCGMCH

DGKCGGYBN
PBM
Lambert et al.(2019)
pTH11436
0.739 0.959
Q84ND8_HORVU
M09719_2.00
Hordeum vulgare Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DRF11_01
0.680 0.816
Q84JE9_HORVU
M09718_2.00
Hordeum vulgare Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DRF13_01
0.680 0.816
Q8H769_WHEAT
M09721_2.00
Triticum aestivum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREB1_01
0.679 0.857
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ERM95542 AP2 66 117

Links

Other AP2 family TFs
Other Amborella trichopoda TFs

70 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
GLYMA06G45680 Glycine max GLYMA06G45680 I 0.753
GLYMA12G32400 Glycine max GLYMA12G32400 I 0.752
GLYMA13G38030 Glycine max GLYMA13G38030 I 0.752
PK07402.1 Cannabis sativa PK07402.1 D 0.739
ORGLA05G0107600 Oryza glaberrima ORGLA05G0107600 I 0.731
OBART05G12580 Oryza barthii OBART05G12580 I 0.731
OGLUM05G13290 Oryza glumaepatula OGLUM05G13290 I 0.729
OLONG_017780 Oryza longistaminata OLONG_017780 I 0.729
ONIVA05G13030 Oryza nivara ONIVA05G13030 I 0.729
BGIOSGA018253 Oryza indica BGIOSGA018253 I 0.729
OPUNC05G10700 Oryza punctata OPUNC05G10700 I 0.729
OMERI05G11290 Oryza meridionalis OMERI05G11290 I 0.729
ORUFI05G13560 Oryza rufipogon ORUFI05G13560 I 0.729
GLYMA12G11150 Glycine max GLYMA12G11150 I 0.729
LPERR05G09930 Leersia perrieri LPERR05G09930 I 0.727
Ca_22585 Cicer arietinum Ca_22585 I 0.721
OB05G20700 Oryza brachyantha OB05G20700 I 0.721
GSMUA_AchrUn_randomG14580_001 Musa acuminata GSMUA_AchrUn_randomG14580_001 I 0.717
Cucsa.136780 Cucumis sativus Cucsa.136780 I 0.716
cassava19475.valid.m1 Manihot esculenta cassava19475.valid.m1 I 0.715
Cla006713 Citrullus lanatus Cla006713 I 0.715
POPTR_0010s19100 Populus trichocarpa POPTR_0010s19100 I 0.713
evm.TU.supercontig_19.121 Carica papaya evm.TU.supercontig_19.121 I 0.713
VIT_13s0067g01960 Vitis vinifera VIT_13s0067g01960 I 0.712
MDP0000147009 Malus domestica MDP0000147009 I 0.710
GSMUA_Achr5G28050_001 Musa acuminata GSMUA_Achr5G28050_001 I 0.710
MDP0000446783 Malus domestica MDP0000446783 I 0.710
SapurV1A.1286s0030 Salix purpurea SapurV1A.1286s0030 I 0.709
SapurV1A.2268s0010 Salix purpurea SapurV1A.2268s0010 I 0.709
Pm018989 Prunus mume Pm018989 I 0.708
PRUPE_ppa007606mg Prunus persica PRUPE_ppa007606mg I 0.708
Ca_14133 Cicer arietinum Ca_14133 I 0.707
POPTR_0008s07360 Populus trichocarpa POPTR_0008s07360 I 0.707
29729.m002292 Ricinus communis 29729.m002292 I 0.705
MTR_0939s0010 Medicago truncatula MTR_0939s0010 I 0.705
gene21047-v1.0-hybrid Fragaria vesca gene21047-v1.0-hybrid I 0.704
MDP0000165880 Malus domestica MDP0000165880 I 0.703
PDK_20s1493381g003 Phoenix dactylifera PDK_20s1493381g003 I 0.701
GSMUA_Achr9G04630_001 Musa acuminata GSMUA_Achr9G04630_001 I 0.700
SapurV1A.1420s0050 Salix purpurea SapurV1A.1420s0050 I 0.698
GSMUA_Achr6G32780_001 Musa acuminata GSMUA_Achr6G32780_001 I 0.698
SapurV1A.0673s0120 Salix purpurea SapurV1A.0673s0120 I 0.698
Aquca_030_00214 Aquilegia coerulea Aquca_030_00214 I 0.697
GSMUA_Achr11G24820_001 Musa acuminata GSMUA_Achr11G24820_001 I 0.697
PRUPE_ppa022733mg Prunus persica PRUPE_ppa022733mg I 0.694
Eucgr.G03094 Eucalyptus grandis Eucgr.G03094 I 0.694
Pm015262 Prunus mume Pm015262 I 0.694
orange1.1g019546m.g Citrus sinensis orange1.1g019546m.g I 0.692
Ciclev10032029m.g Citrus clementina Ciclev10032029m.g I 0.692
gene01985-v1.0-hybrid Fragaria vesca gene01985-v1.0-hybrid I 0.692
Thhalv10016913m.g Eutrema salsugineum Thhalv10016913m.g I 0.690
MDP0000290585 Malus domestica MDP0000290585 I 0.690
gw1.81.143.1 Physcomitrella patens gw1.81.143.1 I 0.688
MTR_2g089170 Medicago truncatula MTR_2g089170 N 0.688
Bo9g177130 Brassica oleracea Bo9g177130 I 0.683
BRADI2G29960 Brachypodium distachyon BRADI2G29960 I 0.681
Q84ND8_HORVU Hordeum vulgare Q84ND8_HORVU D 0.680
MLOC_77405 Hordeum vulgare MLOC_77405 I 0.680
Q84JE9_HORVU Hordeum vulgare Q84JE9_HORVU D 0.680
Cucsa.119440 Cucumis sativus Cucsa.119440 I 0.680
Cla001755 Citrullus lanatus Cla001755 I 0.680
MTR_5g083340 Medicago truncatula MTR_5g083340 I 0.679
MLOC_66686 Hordeum vulgare MLOC_66686 I 0.679
F775_05774 Aegilops tauschii F775_05774 I 0.679
Q8H769_WHEAT Triticum aestivum Q8H769_WHEAT D 0.679
TRIUR3_17973 Triticum urartu TRIUR3_17973 I 0.679
TRAES3BF064700080CFD_g Triticum aestivum TRAES3BF064700080CFD_g I 0.679
Traes_3AS_62742A0471 Triticum aestivum Traes_3AS_62742A0471 I 0.679
Solyc05g052410.1 Solanum lycopersicum Solyc05g052410.1 I 0.678
PGSC0003DMG400027117 Solanum tuberosum PGSC0003DMG400027117 I 0.678