AMTR_s00026p00180130 (Amborella trichopoda)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 AMTR_s00026p00180130 T000361_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK19363.1
M01100_2.00 		Cannabis sativa
NMGCCGHMNN
NNKDCGGCKN		 PBM
Lambert et al.(2019)
pTH10138 		0.680 0.706
PK19363.1
M01643_2.00 		Cannabis sativa
CGCCGYCD
HGRCGGCG		 PBM
Weirauch et al.(2014)
pTH9609 		0.680 0.706
ERF9
M06670_2.00 		Arabidopsis thaliana
YCDCCGCCGYCDHHDYHDYHN
NDRHDRHDDHGRCGGCGGHGR		 Dap-seq
OMalley et al.(2016)
ERF9_col_a 		0.680 0.745
ERF9
M06671_2.00 		Arabidopsis thaliana
NNHDSCGCCGYCRHWDN
NHWDYGRCGGCGSHDNN		 Dap-seq
OMalley et al.(2016)
ERF9_colamp_a 		0.680 0.745
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ERN10411 AP2 107 158

Links

Other AP2 family TFs
Other Amborella trichopoda TFs

132 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
POPTR_0017s08090 Populus trichocarpa POPTR_0017s08090 I 0.870
POPTR_0001s32050 Populus trichocarpa POPTR_0001s32050 I 0.865
cassava38416.m1 Manihot esculenta cassava38416.m1 I 0.865
SapurV1A.0058s0710 Salix purpurea SapurV1A.0058s0710 I 0.865
27446.m000475 Ricinus communis 27446.m000475 I 0.865
TCM_027348 Theobroma cacao TCM_027348 I 0.861
Cucsa.105790 Cucumis sativus Cucsa.105790 I 0.855
Cla015583 Citrullus lanatus Cla015583 I 0.855
mgf023662m Mimulus guttatus mgf023662m I 0.854
Gorai.006G107500 Gossypium raimondii Gorai.006G107500 I 0.854
VIT_09s0002g08830 Vitis vinifera VIT_09s0002g08830 I 0.854
PRUPE_ppa020928mg Prunus persica PRUPE_ppa020928mg I 0.854
evm.TU.supercontig_10.125 Carica papaya evm.TU.supercontig_10.125 I 0.854
SapurV1A.1000s0130 Salix purpurea SapurV1A.1000s0130 I 0.854
gene15953-v1.0-hybrid Fragaria vesca gene15953-v1.0-hybrid I 0.852
Ciclev10027171m.g Citrus clementina Ciclev10027171m.g I 0.851
MTR_4g009260 Medicago truncatula MTR_4g009260 I 0.851
orange1.1g047950m.g Citrus sinensis orange1.1g047950m.g I 0.851
Ca_20041 Cicer arietinum Ca_20041 I 0.851
GLYMA08G23074 Glycine max GLYMA08G23074 I 0.851
Pm013734 Prunus mume Pm013734 I 0.848
MDP0000264187 Malus domestica MDP0000264187 I 0.848
GLYMA07G03041 Glycine max GLYMA07G03041 I 0.844
Gorai.009G125700 Gossypium raimondii Gorai.009G125700 N 0.834
Solyc03g117230.1 Solanum lycopersicum Solyc03g117230.1 N 0.834
Eucgr.F03941 Eucalyptus grandis Eucgr.F03941 N 0.832
fgenesh1_pm.C_scaffold_2001935 Arabidopsis lyrata fgenesh1_pm.C_scaffold_2001935 N 0.824
Bostr.20129s0456 Boechera stricta Bostr.20129s0456 N 0.824
ERF084 Arabidopsis thaliana AT1G80580 N 0.824
Cagra.1725s0082 Capsella grandiflora Cagra.1725s0082 N 0.824
Carubv10022119m.g Capsella rubella Carubv10022119m.g N 0.824
Thhalv10019474m.g Eutrema salsugineum Thhalv10019474m.g N 0.820
Thhalv10000556m.g Eutrema salsugineum Thhalv10000556m.g N 0.820
Bra008460 Brassica rapa Bra008460 N 0.814
gw1.204.54.1 Physcomitrella patens gw1.204.54.1 N 0.808
SELMODRAFT_412693 Selaginella moellendorffii SELMODRAFT_412693 N 0.808
SELMODRAFT_428599 Selaginella moellendorffii SELMODRAFT_428599 N 0.808
SELMODRAFT_417258 Selaginella moellendorffii SELMODRAFT_417258 N 0.808
SELMODRAFT_428344 Selaginella moellendorffii SELMODRAFT_428344 N 0.808
Lus10014345.g Linum usitatissimum Lus10014345.g N 0.801
PGSC0003DMG400010135 Solanum tuberosum PGSC0003DMG400010135 N 0.798
fgenesh1_pg.scaffold_23000002 Physcomitrella patens fgenesh1_pg.scaffold_23000002 I 0.796
Lus10026053.g Linum usitatissimum Lus10026053.g N 0.794
e_gw1.145.79.1 Physcomitrella patens e_gw1.145.79.1 N 0.778
e_gw1.15.234.1 Physcomitrella patens e_gw1.15.234.1 N 0.777
Bo2g095830 Brassica oleracea Bo2g095830 N 0.773
e_gw1.14.213.1 Physcomitrella patens e_gw1.14.213.1 N 0.767
e_gw1.276.69.1 Physcomitrella patens e_gw1.276.69.1 N 0.767
gw1.340.39.1 Physcomitrella patens gw1.340.39.1 N 0.748
POPTR_0013s15440 Populus trichocarpa POPTR_0013s15440 I 0.725
GSMUA_Achr1G25890_001 Musa acuminata GSMUA_Achr1G25890_001 I 0.717
OMERI05G10040 Oryza meridionalis OMERI05G10040 N 0.716
ONIVA05G11840 Oryza nivara ONIVA05G11840 N 0.716
OS05G0316800 Oryza sativa OS05G0316800 N 0.716
BGIOSGA019608 Oryza indica BGIOSGA019608 N 0.716
ORUFI05G12300 Oryza rufipogon ORUFI05G12300 N 0.716
BRADI3G18070 Brachypodium distachyon BRADI3G18070 I 0.709
Solyc01g095500.2 Solanum lycopersicum Solyc01g095500.2 I 0.705
PGSC0003DMG400000091 Solanum tuberosum PGSC0003DMG400000091 I 0.699
Pavir.Fa01730 Panicum virgatum Pavir.Fa01730 I 0.696
Pavir.Fb01486 Panicum virgatum Pavir.Fb01486 I 0.694
Pavir.Fb00952 Panicum virgatum Pavir.Fb00952 I 0.694
PGSC0003DMG400012828 Solanum tuberosum PGSC0003DMG400012828 I 0.694
Ca_20544 Cicer arietinum Ca_20544 I 0.693
GLYMA08G43300 Glycine max GLYMA08G43300 I 0.691
GLYMA18G10290 Glycine max GLYMA18G10290 I 0.690
SapurV1A.2062s0030 Salix purpurea SapurV1A.2062s0030 I 0.689
GSMUA_AchrUn_randomG16100_001 Musa acuminata GSMUA_AchrUn_randomG16100_001 I 0.688
Bra015266 Brassica rapa Bra015266 I 0.686
MTR_2g014340 Medicago truncatula MTR_2g014340 I 0.684
Ca_22534 Cicer arietinum Ca_22534 I 0.684
cassava37846.valid.m1 Manihot esculenta cassava37846.valid.m1 I 0.683
Bra036016 Brassica rapa Bra036016 I 0.683
Bo2g122260 Brassica oleracea Bo2g122260 I 0.683
GSMUA_Achr6G00250_001 Musa acuminata GSMUA_Achr6G00250_001 I 0.683
GSMUA_Achr4G33270_001 Musa acuminata GSMUA_Achr4G33270_001 I 0.683
Thhalv10003431m.g Eutrema salsugineum Thhalv10003431m.g I 0.683
Cucsa.126880 Cucumis sativus Cucsa.126880 I 0.682
Bra006325 Brassica rapa Bra006325 I 0.682
GSMUA_Achr8G33590_001 Musa acuminata GSMUA_Achr8G33590_001 I 0.682
GSMUA_Achr7G03640_001 Musa acuminata GSMUA_Achr7G03640_001 I 0.682
Gorai.002G067600 Gossypium raimondii Gorai.002G067600 I 0.682
Si008428m.g Setaria italica Si008428m.g I 0.682
Eucgr.F01164 Eucalyptus grandis Eucgr.F01164 I 0.681
POPTR_0011s11620 Populus trichocarpa POPTR_0011s11620 I 0.681
GSMUA_Achr4G23620_001 Musa acuminata GSMUA_Achr4G23620_001 I 0.681
SapurV1A.1244s0010 Salix purpurea SapurV1A.1244s0010 I 0.681
SapurV1A.1325s0040 Salix purpurea SapurV1A.1325s0040 I 0.681
GSMUA_Achr7G00350_001 Musa acuminata GSMUA_Achr7G00350_001 I 0.681
MTR_2g078680 Medicago truncatula MTR_2g078680 I 0.681
Carubv10014552m.g Capsella rubella Carubv10014552m.g I 0.681
POPTR_0001s40770 Populus trichocarpa POPTR_0001s40770 I 0.681
Thhalv10021456m.g Eutrema salsugineum Thhalv10021456m.g I 0.681
Ciclev10016276m.g Citrus clementina Ciclev10016276m.g I 0.680
Ciclev10009484m.g Citrus clementina Ciclev10009484m.g I 0.680
SapurV1A.0012s0580 Salix purpurea SapurV1A.0012s0580 I 0.680
orange1.1g028454m.g Citrus sinensis orange1.1g028454m.g I 0.680
Gorai.009G375700 Gossypium raimondii Gorai.009G375700 I 0.680
evm.TU.supercontig_131.83 Carica papaya evm.TU.supercontig_131.83 I 0.680
VIT_19s0014g02240 Vitis vinifera VIT_19s0014g02240 I 0.680
GLYMA13G34920 Glycine max GLYMA13G34920 I 0.680
27904.m000217 Ricinus communis 27904.m000217 I 0.680
PK19363.1 Cannabis sativa PK19363.1 D 0.680
POPTR_0004s04720 Populus trichocarpa POPTR_0004s04720 I 0.680
TCM_031608 Theobroma cacao TCM_031608 I 0.680
POPTR_0011s05580 Populus trichocarpa POPTR_0011s05580 I 0.680
GLYMA12G35550 Glycine max GLYMA12G35550 I 0.680
ERF9 Arabidopsis thaliana AT5G44210 D 0.680
GLYMA12G26836 Glycine max GLYMA12G26836 I 0.680
GLYMA06G35710 Glycine max GLYMA06G35710 I 0.680
Bostr.3148s0037 Boechera stricta Bostr.3148s0037 I 0.680
ERF9 Arabidopsis lyrata fgenesh2_kg.8__388__AT5G44210.1 I 0.680
PGSC0003DMG401013892 Solanum tuberosum PGSC0003DMG401013892 I 0.679
PGSC0003DMG402013892 Solanum tuberosum PGSC0003DMG402013892 I 0.679
Solyc12g005960.1 Solanum lycopersicum Solyc12g005960.1 I 0.679
Cla020000 Citrullus lanatus Cla020000 I 0.679
Cucsa.195660 Cucumis sativus Cucsa.195660 I 0.679
Cla002268 Citrullus lanatus Cla002268 I 0.679
VIT_10s0003g00140 Vitis vinifera VIT_10s0003g00140 I 0.679
Carubv10011371m.g Capsella rubella Carubv10011371m.g I 0.679
Cagra.0897s0005 Capsella grandiflora Cagra.0897s0005 I 0.679
cassava46560.m1 Manihot esculenta cassava46560.m1 I 0.678
Cagra.0381s0006 Capsella grandiflora Cagra.0381s0006 I 0.678
GSMUA_Achr9G11480_001 Musa acuminata GSMUA_Achr9G11480_001 I 0.678
Carubv10027246m.g Capsella rubella Carubv10027246m.g I 0.678
Gorai.010G256600 Gossypium raimondii Gorai.010G256600 I 0.678
PRUPE_ppa010982mg Prunus persica PRUPE_ppa010982mg I 0.678
GRMZM2G310368 Zea mays GRMZM2G310368 I 0.678
Pm011391 Prunus mume Pm011391 I 0.678
Ca_11261 Cicer arietinum Ca_11261 I 0.677
MTR_4g078710 Medicago truncatula MTR_4g078710 I 0.677
Cucsa.046390 Cucumis sativus Cucsa.046390 I 0.677