AMTR_s00039p00088760 (Amborella trichopoda)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 AMTR_s00039p00088760 T000363_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK08602.1
M01098_2.00 		Cannabis sativa
NYCACCGCYN
NRGCGGTGRN		 PBM
Lambert et al.(2019)
pTH11421 		0.694 0.780
DREB2D
M01611_2.00 		Arabidopsis thaliana
NNRCCGHNN
NNDCGGYNN		 PBM
Weirauch et al.(2014)
pTH8108 		0.693 0.780
DREB2D
M06597_2.00 		Arabidopsis thaliana
YHNYYDCCRCCGYYD
HRRCGGYGGHRRNDR		 Dap-seq
OMalley et al.(2016)
At1g75490_col_a 		0.693 0.780
DREB2D
M06598_2.00 		Arabidopsis thaliana
HNNHDYCACCGHYWN
NWRDCGGTGRHDNND		 Dap-seq
OMalley et al.(2016)
At1g75490_colamp_a 		0.693 0.780
DREB2F
M06630_2.00 		Arabidopsis thaliana
YCDCCRCCGCY
RGCGGYGGHGR		 Dap-seq
OMalley et al.(2016)
AT3G57600_col_a 		0.685 0.800
DREB2G
M06662_2.00 		Arabidopsis thaliana
DCCRCCGCYDYHDYH
DRHDRHRGCGGYGGH		 Dap-seq
OMalley et al.(2016)
At5g18450_col_a 		0.681 0.740
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ERN15763 AP2 25 76

Links

Other AP2 family TFs
Other Amborella trichopoda TFs

140 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MTR_5g083330 Medicago truncatula MTR_5g083330 I 0.726
Lus10023633.g Linum usitatissimum Lus10023633.g I 0.726
Lus10034902.g Linum usitatissimum Lus10034902.g I 0.726
Bra023674 Brassica rapa Bra023674 I 0.719
Bo2g016490 Brassica oleracea Bo2g016490 I 0.719
Eucgr.A02390 Eucalyptus grandis Eucgr.A02390 I 0.717
SapurV1A.0001s0300 Salix purpurea SapurV1A.0001s0300 I 0.716
Solyc04g050750.1 Solanum lycopersicum Solyc04g050750.1 I 0.715
GRMZM2G376255 Zea mays GRMZM2G376255 I 0.710
MDP0000250927 Malus domestica MDP0000250927 I 0.707
OMERI03G05220 Oryza meridionalis OMERI03G05220 I 0.706
ONIVA03G05350 Oryza nivara ONIVA03G05350 I 0.706
OPUNC03G05230 Oryza punctata OPUNC03G05230 I 0.706
GLYMA10G21850 Glycine max GLYMA10G21850 I 0.706
OGLUM03G05490 Oryza glumaepatula OGLUM03G05490 I 0.706
GRMZM2G399098 Zea mays GRMZM2G399098 I 0.706
DREB2E Oryza sativa OS03G0174400 I 0.706
OBART03G05550 Oryza barthii OBART03G05550 I 0.706
LPERR03G04860 Leersia perrieri LPERR03G04860 I 0.706
GRMZM2G419901 Zea mays GRMZM2G419901 I 0.706
ORUFI03G05330 Oryza rufipogon ORUFI03G05330 I 0.706
GLYMA02G31350 Glycine max GLYMA02G31350 I 0.706
Lus10012210.g Linum usitatissimum Lus10012210.g I 0.706
Pavir.Ia04341 Panicum virgatum Pavir.Ia04341 I 0.706
BGIOSGA011963 Oryza indica BGIOSGA011963 I 0.706
Pavir.Ib00517 Panicum virgatum Pavir.Ib00517 I 0.706
evm.TU.supercontig_92.16 Carica papaya evm.TU.supercontig_92.16 I 0.706
Lus10011319.g Linum usitatissimum Lus10011319.g I 0.706
BRADI1G72990 Brachypodium distachyon BRADI1G72990 I 0.706
SELMODRAFT_27203 Selaginella moellendorffii SELMODRAFT_27203 I 0.705
SELMODRAFT_38483 Selaginella moellendorffii SELMODRAFT_38483 I 0.705
MDP0000871361 Malus domestica MDP0000871361 I 0.704
PGSC0003DMG400023717 Solanum tuberosum PGSC0003DMG400023717 I 0.704
orange1.1g042353m.g Citrus sinensis orange1.1g042353m.g I 0.704
27810.m000639 Ricinus communis 27810.m000639 I 0.704
SapurV1A.0018s0040 Salix purpurea SapurV1A.0018s0040 I 0.704
Ciclev10005549m.g Citrus clementina Ciclev10005549m.g I 0.704
cassava15495.m1 Manihot esculenta cassava15495.m1 I 0.704
MDP0000703626 Malus domestica MDP0000703626 I 0.704
PRUPE_ppa009616mg Prunus persica PRUPE_ppa009616mg I 0.704
gene26463-v1.0-hybrid Fragaria vesca gene26463-v1.0-hybrid I 0.704
TCM_024756 Theobroma cacao TCM_024756 I 0.704
Traes_4AS_0D75149B5 Triticum aestivum Traes_4AS_0D75149B5 I 0.704
Gorai.007G359400 Gossypium raimondii Gorai.007G359400 I 0.704
cassava39243.m1 Manihot esculenta cassava39243.m1 I 0.704
Pm025865 Prunus mume Pm025865 I 0.704
Ca_07264 Cicer arietinum Ca_07264 I 0.704
POPTR_0016s05360 Populus trichocarpa POPTR_0016s05360 I 0.704
VIT_08s0007g08150 Vitis vinifera VIT_08s0007g08150 I 0.704
GLYMA03G29530 Glycine max GLYMA03G29530 I 0.704
GLYMA19G32380 Glycine max GLYMA19G32380 I 0.704
MTR_7g092190 Medicago truncatula MTR_7g092190 I 0.704
PK07829.1 Cannabis sativa PK07829.1 I 0.702
gw1.120.55.1 Physcomitrella patens gw1.120.55.1 I 0.701
PRUPE_ppa026176mg Prunus persica PRUPE_ppa026176mg I 0.700
GLYMA14G32210 Glycine max GLYMA14G32210 I 0.700
POPTR_0006s05320 Populus trichocarpa POPTR_0006s05320 I 0.698
gene16710-v1.0-hybrid Fragaria vesca gene16710-v1.0-hybrid I 0.697
MDP0000295902 Malus domestica MDP0000295902 I 0.697
MDP0000141335 Malus domestica MDP0000141335 I 0.697
GLYMA06G03110 Glycine max GLYMA06G03110 I 0.696
GLYMA04G03070 Glycine max GLYMA04G03070 I 0.696
Bra003752 Brassica rapa Bra003752 I 0.696
Ca_10770 Cicer arietinum Ca_10770 I 0.696
AMTR_s00022p00250320 Amborella trichopoda AMTR_s00022p00250320 I 0.696
Gorai.007G271900 Gossypium raimondii Gorai.007G271900 I 0.696
MTR_1g023170 Medicago truncatula MTR_1g023170 I 0.696
Bo6g086320 Brassica oleracea Bo6g086320 I 0.696
LjSGA_063888.1 Lotus japonicus LjSGA_063888.1 I 0.696
Bra008200 Brassica rapa Bra008200 I 0.695
SapurV1A.0133s0330 Salix purpurea SapurV1A.0133s0330 I 0.695
Bo2g083920 Brassica oleracea Bo2g083920 I 0.695
Pm003634 Prunus mume Pm003634 I 0.695
Aquca_009_00282 Aquilegia coerulea Aquca_009_00282 I 0.694
e_gw1.162.74.1 Physcomitrella patens e_gw1.162.74.1 I 0.694
PK08602.1 Cannabis sativa PK08602.1 D 0.694
Thhalv10019142m.g Eutrema salsugineum Thhalv10019142m.g I 0.693
Carubv10020960m.g Capsella rubella Carubv10020960m.g I 0.693
Bra015840 Brassica rapa Bra015840 I 0.693
Bo6g119660 Brassica oleracea Bo6g119660 I 0.693
fgenesh2_kg.2__1828__AT1G75490.1 Arabidopsis lyrata fgenesh2_kg.2__1828__AT1G75490.1 I 0.693
DREB2D Arabidopsis thaliana AT1G75490 D 0.693
Cucsa.342750 Cucumis sativus Cucsa.342750 I 0.693
Cagra.0799s0022 Capsella grandiflora Cagra.0799s0022 I 0.693
Bostr.3288s0201 Boechera stricta Bostr.3288s0201 I 0.693
Pm006274 Prunus mume Pm006274 I 0.693
Cla021113 Citrullus lanatus Cla021113 I 0.692
evm.TU.supercontig_99.20 Carica papaya evm.TU.supercontig_99.20 I 0.691
Gorai.009G197800 Gossypium raimondii Gorai.009G197800 I 0.691
GLYMA17G37350 Glycine max GLYMA17G37350 I 0.691
mgf024545m Mimulus guttatus mgf024545m I 0.691
GLYMA14G07620 Glycine max GLYMA14G07620 I 0.691
gene08479-v1.0-hybrid Fragaria vesca gene08479-v1.0-hybrid I 0.691
Gorai.005G110100 Gossypium raimondii Gorai.005G110100 I 0.691
Traes_2AL_3FB37A3E7 Triticum aestivum Traes_2AL_3FB37A3E7 I 0.691
Aquca_004_00452 Aquilegia coerulea Aquca_004_00452 I 0.690
SapurV1A.0188s0060 Salix purpurea SapurV1A.0188s0060 I 0.690
MDP0000250924 Malus domestica MDP0000250924 I 0.689
SELMODRAFT_38502 Selaginella moellendorffii SELMODRAFT_38502 I 0.688
orange1.1g036655m.g Citrus sinensis orange1.1g036655m.g I 0.688
SELMODRAFT_105485 Selaginella moellendorffii SELMODRAFT_105485 I 0.688
Gorai.009G271400 Gossypium raimondii Gorai.009G271400 I 0.688
cassava41240.m1 Manihot esculenta cassava41240.m1 I 0.688
30170.m014115 Ricinus communis 30170.m014115 I 0.688
Ciclev10002280m.g Citrus clementina Ciclev10002280m.g I 0.688
POPTR_0002s03090 Populus trichocarpa POPTR_0002s03090 I 0.687
Bo6g073020 Brassica oleracea Bo6g073020 I 0.687
cassava45031.m1 Manihot esculenta cassava45031.m1 I 0.687
Bo8g092010 Brassica oleracea Bo8g092010 I 0.686
Bra007341 Brassica rapa Bra007341 I 0.686
mgf017629m Mimulus guttatus mgf017629m I 0.685
Bo4g111040 Brassica oleracea Bo4g111040 I 0.685
DREB2F Arabidopsis thaliana AT3G57600 D 0.685
POPTR_0005s25470 Populus trichocarpa POPTR_0005s25470 I 0.685
Thhalv10006489m.g Eutrema salsugineum Thhalv10006489m.g I 0.685
PRUPE_ppa023248mg Prunus persica PRUPE_ppa023248mg I 0.685
Bostr.20903s0012 Boechera stricta Bostr.20903s0012 I 0.685
fgenesh2_kg.5__2201__AT3G57600.1 Arabidopsis lyrata fgenesh2_kg.5__2201__AT3G57600.1 I 0.685
Carubv10017800m.g Capsella rubella Carubv10017800m.g I 0.685
Cagra.0578s0089 Capsella grandiflora Cagra.0578s0089 I 0.685
TCM_034132 Theobroma cacao TCM_034132 I 0.685
Bra014617 Brassica rapa Bra014617 I 0.685
SapurV1A.1286s0030 Salix purpurea SapurV1A.1286s0030 I 0.684
SapurV1A.2268s0010 Salix purpurea SapurV1A.2268s0010 I 0.684
VIT_18s0001g13320 Vitis vinifera VIT_18s0001g13320 I 0.684
GSMUA_AchrUn_randomG08690_001 Musa acuminata GSMUA_AchrUn_randomG08690_001 I 0.682
GSMUA_Achr9G04630_001 Musa acuminata GSMUA_Achr9G04630_001 I 0.682
Cucsa.336890 Cucumis sativus Cucsa.336890 I 0.682
Thhalv10015907m.g Eutrema salsugineum Thhalv10015907m.g I 0.681
DREB2G Arabidopsis thaliana AT5G18450 D 0.681
Bo9g155940 Brassica oleracea Bo9g155940 I 0.681
Bostr.26527s0367 Boechera stricta Bostr.26527s0367 I 0.681
Bra002159 Brassica rapa Bra002159 I 0.681
scaffold_601912.1 Arabidopsis lyrata scaffold_601912.1 I 0.681
PGSC0003DMG400028700 Solanum tuberosum PGSC0003DMG400028700 I 0.680
VIT_13s0067g01960 Vitis vinifera VIT_13s0067g01960 I 0.679
MDP0000153866 Malus domestica MDP0000153866 I 0.678
MTR_5g083340 Medicago truncatula MTR_5g083340 I 0.677
GSMUA_Achr11G24820_001 Musa acuminata GSMUA_Achr11G24820_001 I 0.677
evm.TU.supercontig_51.23 Carica papaya evm.TU.supercontig_51.23 I 0.677