AMTR_s00058p00216470 (Amborella trichopoda)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 AMTR_s00058p00216470 T000372_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q9XHD4_PETHY
M09737_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AP2A_01 		0.813 0.909
RAP2.7
M00845_2.00 		Arabidopsis thaliana
KRCGRGGD
HCCYCGYM		 PBM
Franco-Zorrilla et al.(2014)
TOE1 		0.805 0.919
Q9XHD3_PETHY
M09736_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AP2B_01 		0.786 0.879
P93632_MAIZE
M09712_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GL15_01 		0.767 0.798
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ERN06706 AP2 114 163
ERN06706 AP2 206 257

Links

Other AP2 family TFs
Other Amborella trichopoda TFs

237 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_010_00628 Aquilegia coerulea Aquca_010_00628 I 0.827
VIT_13s0019g03550 Vitis vinifera VIT_13s0019g03550 I 0.825
SapurV1A.1340s0010 Salix purpurea SapurV1A.1340s0010 I 0.823
ONIVA03G40610 Oryza nivara ONIVA03G40610 I 0.823
ORUFI03G40640 Oryza rufipogon ORUFI03G40640 I 0.823
OPUNC03G36030 Oryza punctata OPUNC03G36030 I 0.823
GSMUA_AchrUn_randomG10320_001 Musa acuminata GSMUA_AchrUn_randomG10320_001 I 0.823
BGIOSGA013826 Oryza indica BGIOSGA013826 I 0.823
OGLUM03G38790 Oryza glumaepatula OGLUM03G38790 I 0.823
OMERI03G35820 Oryza meridionalis OMERI03G35820 I 0.823
GSMUA_Achr6G33140_001 Musa acuminata GSMUA_Achr6G33140_001 I 0.821
GSMUA_Achr6G34420_001 Musa acuminata GSMUA_Achr6G34420_001 I 0.817
Aquca_007_00714 Aquilegia coerulea Aquca_007_00714 I 0.817
MLOC_43575 Hordeum vulgare MLOC_43575 I 0.816
OB03G45870 Oryza brachyantha OB03G45870 I 0.815
BGIOSGA025426 Oryza indica BGIOSGA025426 I 0.815
Ca_14618 Cicer arietinum Ca_14618 I 0.815
OBART07G08110 Oryza barthii OBART07G08110 I 0.815
OGLUM07G07330 Oryza glumaepatula OGLUM07G07330 I 0.815
OLONG_021321 Oryza longistaminata OLONG_021321 I 0.815
OS07G0235800 Oryza sativa OS07G0235800 I 0.815
ORGLA07G0068600 Oryza glaberrima ORGLA07G0068600 I 0.815
OMERI07G06850 Oryza meridionalis OMERI07G06850 I 0.815
OPUNC07G07690 Oryza punctata OPUNC07G07690 I 0.815
ONIVA03G25220 Oryza nivara ONIVA03G25220 I 0.815
ORUFI07G08180 Oryza rufipogon ORUFI07G08180 I 0.815
29805.m001494 Ricinus communis 29805.m001494 I 0.814
Q9XHD4_PETHY Petunia x hybrida Q9XHD4_PETHY D 0.813
GRMZM5G862109 Zea mays GRMZM5G862109 I 0.813
Pavir.J41060 Panicum virgatum Pavir.J41060 I 0.813
Ca_09295 Cicer arietinum Ca_09295 I 0.813
GSMUA_Achr1G09830_001 Musa acuminata GSMUA_Achr1G09830_001 I 0.813
Sb01g003400 Sorghum bicolor Sb01g003400 I 0.813
Bra011741 Brassica rapa Bra011741 I 0.813
Bo1g004960 Brassica oleracea Bo1g004960 I 0.813
Cagra.4909s0048 Capsella grandiflora Cagra.4909s0048 I 0.813
BRADI1G53650 Brachypodium distachyon BRADI1G53650 I 0.813
Bo7g118400 Brassica oleracea Bo7g118400 I 0.813
Solyc03g044300.2 Solanum lycopersicum Solyc03g044300.2 I 0.813
AP2 Arabidopsis thaliana AT4G36920 I 0.813
AP2 Arabidopsis lyrata fgenesh2_kg.7__332__AT4G36920.1 I 0.813
Bra017809 Brassica rapa Bra017809 I 0.813
Carubv10004818m.g Capsella rubella Carubv10004818m.g I 0.813
LjSGA_005424.1 Lotus japonicus LjSGA_005424.1 I 0.813
Bostr.7867s1579 Boechera stricta Bostr.7867s1579 I 0.813
Pavir.J23520 Panicum virgatum Pavir.J23520 I 0.813
MTR_4g094868 Medicago truncatula MTR_4g094868 I 0.813
Si036068m.g Setaria italica Si036068m.g I 0.813
MTR_5g016810 Medicago truncatula MTR_5g016810 I 0.812
Cla000716 Citrullus lanatus Cla000716 I 0.812
PK02403.1 Cannabis sativa PK02403.1 I 0.812
TOE3 Vitis vinifera VIT_07s0031g00220 I 0.812
Solyc02g093150.2 Solanum lycopersicum Solyc02g093150.2 I 0.812
GSMUA_Achr3G13180_001 Musa acuminata GSMUA_Achr3G13180_001 I 0.812
evm.TU.supercontig_55.116 Carica papaya evm.TU.supercontig_55.116 I 0.812
PGSC0003DMG400006482 Solanum tuberosum PGSC0003DMG400006482 I 0.812
SapurV1A.0689s0070 Salix purpurea SapurV1A.0689s0070 I 0.812
GLYMA05G18041 Glycine max GLYMA05G18041 I 0.812
Gorai.003G025900 Gossypium raimondii Gorai.003G025900 I 0.812
PGSC0003DMG400004006 Solanum tuberosum PGSC0003DMG400004006 I 0.812
GLYMA01G39520 Glycine max GLYMA01G39520 I 0.812
POPTR_0007s10780 Populus trichocarpa POPTR_0007s10780 I 0.812
GLYMA17G18640 Glycine max GLYMA17G18640 I 0.812
GSMUA_Achr1G26080_001 Musa acuminata GSMUA_Achr1G26080_001 I 0.812
Cucsa.102550 Cucumis sativus Cucsa.102550 I 0.812
Si029636m.g Setaria italica Si029636m.g I 0.811
Pavir.Ba03394 Panicum virgatum Pavir.Ba03394 I 0.811
GRMZM2G176175 Zea mays GRMZM2G176175 I 0.811
GSMUA_AchrUn_randomG16200_001 Musa acuminata GSMUA_AchrUn_randomG16200_001 I 0.811
mgf009315m Mimulus guttatus mgf009315m I 0.811
Sb02g007000 Sorghum bicolor Sb02g007000 I 0.811
Gorai.008G077800 Gossypium raimondii Gorai.008G077800 I 0.809
Gorai.007G215900 Gossypium raimondii Gorai.007G215900 I 0.809
TCM_000665 Theobroma cacao TCM_000665 I 0.809
GSMUA_Achr4G06100_001 Musa acuminata GSMUA_Achr4G06100_001 I 0.808
GSMUA_Achr8G18550_001 Musa acuminata GSMUA_Achr8G18550_001 I 0.808
Pavir.J11433 Panicum virgatum Pavir.J11433 I 0.807
orange1.1g010454m.g Citrus sinensis orange1.1g010454m.g I 0.807
Eucgr.J02113 Eucalyptus grandis Eucgr.J02113 I 0.807
Pavir.J23348 Panicum virgatum Pavir.J23348 I 0.807
OS05G0121600 Oryza sativa OS05G0121600 I 0.807
PDK_20s1506731g001 Phoenix dactylifera PDK_20s1506731g001 I 0.807
chr3.LjT05P05.30.nd Lotus japonicus chr3.LjT05P05.30.nd I 0.807
PGSC0003DMG400025390 Solanum tuberosum PGSC0003DMG400025390 I 0.807
Eucgr.B02453 Eucalyptus grandis Eucgr.B02453 I 0.807
Ca_02499 Cicer arietinum Ca_02499 I 0.807
AMTR_s00035p00205430 Amborella trichopoda AMTR_s00035p00205430 I 0.807
28752.m000339 Ricinus communis 28752.m000339 I 0.807
cassava13566.valid.m1 Manihot esculenta cassava13566.valid.m1 I 0.807
Aquca_027_00133 Aquilegia coerulea Aquca_027_00133 I 0.807
cassava24954.valid.m1 Manihot esculenta cassava24954.valid.m1 I 0.807
RAP2.7 Vitis vinifera VIT_06s0004g03590 I 0.807
Si025305m.g Setaria italica Si025305m.g I 0.807
OPUNC05G01480 Oryza punctata OPUNC05G01480 I 0.807
GLYMA12G07800 Glycine max GLYMA12G07800 I 0.807
GLYMA11G15650 Glycine max GLYMA11G15650 I 0.807
BGIOSGA018911 Oryza indica BGIOSGA018911 I 0.807
GSMUA_Achr8G01980_001 Musa acuminata GSMUA_Achr8G01980_001 I 0.807
GLYMA13G40470 Glycine max GLYMA13G40470 I 0.807
ORGLA05G0015400 Oryza glaberrima ORGLA05G0015400 I 0.807
Pm002492 Prunus mume Pm002492 I 0.806
PRUPE_ppa005230mg Prunus persica PRUPE_ppa005230mg I 0.806
POPTR_0016s08530 Populus trichocarpa POPTR_0016s08530 I 0.806
GSMUA_Achr9G03060_001 Musa acuminata GSMUA_Achr9G03060_001 I 0.806
SapurV1A.0247s0170 Salix purpurea SapurV1A.0247s0170 I 0.806
MTR_4g061200 Medicago truncatula MTR_4g061200 I 0.806
VIT_08s0040g03180 Vitis vinifera VIT_08s0040g03180 I 0.806
PGSC0003DMG400027904 Solanum tuberosum PGSC0003DMG400027904 I 0.806
Solyc02g064960.2 Solanum lycopersicum Solyc02g064960.2 I 0.806
GSMUA_Achr10G03230_001 Musa acuminata GSMUA_Achr10G03230_001 I 0.806
TCM_022077 Theobroma cacao TCM_022077 I 0.806
MDP0000200319 Malus domestica MDP0000200319 I 0.806
Gorai.002G251500 Gossypium raimondii Gorai.002G251500 I 0.806
Traes_1AS_90F3120F8 Triticum aestivum Traes_1AS_90F3120F8 I 0.805
Cagra.1809s0003 Capsella grandiflora Cagra.1809s0003 I 0.805
Traes_1BS_E68807072 Triticum aestivum Traes_1BS_E68807072 I 0.805
TCM_042000 Theobroma cacao TCM_042000 I 0.805
F775_32962 Aegilops tauschii F775_32962 I 0.805
Carubv10025387m.g Capsella rubella Carubv10025387m.g I 0.805
Cucsa.367290 Cucumis sativus Cucsa.367290 I 0.805
Cucsa.307230 Cucumis sativus Cucsa.307230 I 0.805
Gorai.004G002100 Gossypium raimondii Gorai.004G002100 I 0.805
Cla018124 Citrullus lanatus Cla018124 I 0.805
Traes_1DS_2BB06F54C Triticum aestivum Traes_1DS_2BB06F54C I 0.805
PK07183.1 Cannabis sativa PK07183.1 I 0.805
RAP2.7 Arabidopsis thaliana AT2G28550 D 0.805
Thhalv10016626m.g Eutrema salsugineum Thhalv10016626m.g I 0.805
BRADI2G37800 Brachypodium distachyon BRADI2G37800 I 0.805
OPUNC04G24930 Oryza punctata OPUNC04G24930 I 0.804
BGIOSGA017250 Oryza indica BGIOSGA017250 I 0.804
PGSC0003DMG400025479 Solanum tuberosum PGSC0003DMG400025479 I 0.804
GRMZM2G174784 Zea mays GRMZM2G174784 I 0.804
POPTR_0005s18400 Populus trichocarpa POPTR_0005s18400 I 0.804
GLYMA03G33470 Glycine max GLYMA03G33470 I 0.804
ORUFI04G29120 Oryza rufipogon ORUFI04G29120 I 0.804
ONIVA04G25920 Oryza nivara ONIVA04G25920 I 0.804
MTR_2g093060 Medicago truncatula MTR_2g093060 I 0.804
OGLUM04G27380 Oryza glumaepatula OGLUM04G27380 I 0.804
Solyc10g084340.1 Solanum lycopersicum Solyc10g084340.1 I 0.804
ORGLA04G0237800 Oryza glaberrima ORGLA04G0237800 I 0.804
OMERI04G22900 Oryza meridionalis OMERI04G22900 I 0.804
Sb06g030670 Sorghum bicolor Sb06g030670 I 0.804
Si012635m.g Setaria italica Si012635m.g I 0.804
LjT39B13.80.nc Lotus japonicus LjT39B13.80.nc I 0.804
GRMZM2G700665 Zea mays GRMZM2G700665 I 0.803
BRADI5G24100 Brachypodium distachyon BRADI5G24100 I 0.803
Pm000974 Prunus mume Pm000974 I 0.803
MDP0000181606 Malus domestica MDP0000181606 I 0.803
Lus10019331.g Linum usitatissimum Lus10019331.g I 0.802
mgf021945m Mimulus guttatus mgf021945m I 0.802
Ciclev10028259m.g Citrus clementina Ciclev10028259m.g I 0.802
SapurV1A.0209s0320 Salix purpurea SapurV1A.0209s0320 I 0.802
POPTR_0006s13460 Populus trichocarpa POPTR_0006s13460 I 0.802
Lus10009374.g Linum usitatissimum Lus10009374.g I 0.802
Bra011939 Brassica rapa Bra011939 I 0.801
Lus10023165.g Linum usitatissimum Lus10023165.g I 0.801
GSMUA_Achr9G04270_001 Musa acuminata GSMUA_Achr9G04270_001 I 0.801
29169.m000017 Ricinus communis 29169.m000017 I 0.801
GSMUA_Achr3G28340_001 Musa acuminata GSMUA_Achr3G28340_001 I 0.801
cassava12358.valid.m1 Manihot esculenta cassava12358.valid.m1 I 0.801
Bo4g070350 Brassica oleracea Bo4g070350 I 0.801
GSMUA_Achr5G29290_001 Musa acuminata GSMUA_Achr5G29290_001 I 0.800
cassava2301.valid.m1 Manihot esculenta cassava2301.valid.m1 I 0.798
chr1.CM0033.300.nc Lotus japonicus chr1.CM0033.300.nc I 0.798
MDP0000137561 Malus domestica MDP0000137561 I 0.796
Pm030172 Prunus mume Pm030172 I 0.795
PRUPE_ppa003783mg Prunus persica PRUPE_ppa003783mg I 0.795
gene23876-v1.0-hybrid Fragaria vesca gene23876-v1.0-hybrid I 0.795
Eucgr.I00892 Eucalyptus grandis Eucgr.I00892 I 0.795
LPERR06G18460 Leersia perrieri LPERR06G18460 I 0.794
mgf010466m Mimulus guttatus mgf010466m I 0.793
mgf005133m Mimulus guttatus mgf005133m I 0.793
OLONG_026757 Oryza longistaminata OLONG_026757 I 0.792
Gorai.011G106200 Gossypium raimondii Gorai.011G106200 I 0.792
LPERR05G01420 Leersia perrieri LPERR05G01420 I 0.792
OPUNC06G19990 Oryza punctata OPUNC06G19990 I 0.792
Cucsa.051660 Cucumis sativus Cucsa.051660 I 0.791
Gorai.009G104200 Gossypium raimondii Gorai.009G104200 I 0.791
ORUFI06G23930 Oryza rufipogon ORUFI06G23930 I 0.790
OB06G29960 Oryza brachyantha OB06G29960 I 0.790
Pavir.J37968 Panicum virgatum Pavir.J37968 I 0.790
ONIVA06G26190 Oryza nivara ONIVA06G26190 I 0.790
BGIOSGA020813 Oryza indica BGIOSGA020813 I 0.790
OGLUM06G23380 Oryza glumaepatula OGLUM06G23380 I 0.790
OMERI06G22190 Oryza meridionalis OMERI06G22190 I 0.790
PGSC0003DMG400011046 Solanum tuberosum PGSC0003DMG400011046 I 0.788
MTR_7g100590 Medicago truncatula MTR_7g100590 I 0.788
Ca_12010 Cicer arietinum Ca_12010 I 0.788
Bra012139 Brassica rapa Bra012139 I 0.787
Bo7g064000 Brassica oleracea Bo7g064000 I 0.787
Thhalv10004742m.g Eutrema salsugineum Thhalv10004742m.g I 0.787
Q9XHD3_PETHY Petunia x hybrida Q9XHD3_PETHY D 0.786
evm.TU.supercontig_114.55 Carica papaya evm.TU.supercontig_114.55 I 0.785
GSMUA_Achr11G23870_001 Musa acuminata GSMUA_Achr11G23870_001 I 0.785
Solyc06g075510.2 Solanum lycopersicum Solyc06g075510.2 I 0.783
SapurV1A.0038s0220 Salix purpurea SapurV1A.0038s0220 I 0.782
Ciclev10011588m.g Citrus clementina Ciclev10011588m.g I 0.782
GLYMA19G36200 Glycine max GLYMA19G36200 I 0.782
orange1.1g010763m.g Citrus sinensis orange1.1g010763m.g I 0.781
Lus10041595.g Linum usitatissimum Lus10041595.g I 0.781
Ciclev10031306m.g Citrus clementina Ciclev10031306m.g I 0.781
GLYMA15G04930 Glycine max GLYMA15G04930 I 0.780
gene25394-v1.0-hybrid Fragaria vesca gene25394-v1.0-hybrid I 0.779
Lus10018124.g Linum usitatissimum Lus10018124.g I 0.779
Lus10026477.g Linum usitatissimum Lus10026477.g I 0.779
Lus10019905.g Linum usitatissimum Lus10019905.g I 0.779
POPTR_0008s04490 Populus trichocarpa POPTR_0008s04490 I 0.779
Bostr.0568s0140 Boechera stricta Bostr.0568s0140 I 0.777
Carubv10026667m.g Capsella rubella Carubv10026667m.g I 0.777
TOE3 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002628 I 0.777
Cagra.0342s0004 Capsella grandiflora Cagra.0342s0004 I 0.777
TOE3 Arabidopsis thaliana AT5G67180 I 0.777
Ciclev10025364m.g Citrus clementina Ciclev10025364m.g I 0.776
Pavir.J27340 Panicum virgatum Pavir.J27340 I 0.776
GSMUA_Achr5G07270_001 Musa acuminata GSMUA_Achr5G07270_001 I 0.776
orange1.1g009943m.g Citrus sinensis orange1.1g009943m.g I 0.776
Lus10015055.g Linum usitatissimum Lus10015055.g I 0.776
Lus10004990.g Linum usitatissimum Lus10004990.g I 0.775
GRMZM2G416701 Zea mays GRMZM2G416701 I 0.769
GRMZM2G160730 Zea mays GRMZM2G160730 I 0.767
OS03G0818800 Oryza sativa OS03G0818800 I 0.767
P93632_MAIZE Zea mays P93632_MAIZE D 0.767
Sb10g025053 Sorghum bicolor Sb10g025053 I 0.767
MDP0000163645 Malus domestica MDP0000163645 I 0.766
GSMUA_Achr8G21030_001 Musa acuminata GSMUA_Achr8G21030_001 I 0.764
BRADI1G30337 Brachypodium distachyon BRADI1G30337 I 0.763
evm.TU.supercontig_139.43 Carica papaya evm.TU.supercontig_139.43 I 0.763
MLOC_43041 Hordeum vulgare MLOC_43041 I 0.762
Cucsa.065640 Cucumis sativus Cucsa.065640 I 0.761
Pavir.Da00466 Panicum virgatum Pavir.Da00466 I 0.760
cassava13884.valid.m1 Manihot esculenta cassava13884.valid.m1 I 0.760
Cla020549 Citrullus lanatus Cla020549 I 0.758
gene18102-v1.0-hybrid Fragaria vesca gene18102-v1.0-hybrid I 0.757
Cla018549 Citrullus lanatus Cla018549 I 0.756
Lus10036141.g Linum usitatissimum Lus10036141.g I 0.747
POPTR_0010s22320 Populus trichocarpa POPTR_0010s22320 I 0.689
orange1.1g039174m.g Citrus sinensis orange1.1g039174m.g N 0.688