AMTR_s00099p00039760 (Amborella trichopoda)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 AMTR_s00099p00039760 T000387_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF021
M06593_2.00
Arabidopsis thaliana
HNYCDYCDYCDYCRCCGHCD

HGDCGGYGRHGRHGRHGRND
Dap-seq
OMalley et al.(2016)
AT1G71450_col_a
0.714 0.800
ERF021
M06594_2.00
Arabidopsis thaliana
NHNNCRCCGHCDH

DHGDCGGYGNNDN
Dap-seq
OMalley et al.(2016)
AT1G71450_colamp_a
0.714 0.800
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ERM99671 AP2 42 93

Links

Other AP2 family TFs
Other Amborella trichopoda TFs

116 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Bo8g027240 Brassica oleracea Bo8g027240 I 0.773
ERF022 Arabidopsis thaliana AT1G33760 I 0.769
Thhalv10010002m.g Eutrema salsugineum Thhalv10010002m.g I 0.767
Bra028009 Brassica rapa Bra028009 I 0.758
Carubv10011715m.g Capsella rubella Carubv10011715m.g I 0.758
Bostr.3359s0006 Boechera stricta Bostr.3359s0006 I 0.756
Bo6g046850 Brassica oleracea Bo6g046850 I 0.752
scaffold_103754.1 Arabidopsis lyrata scaffold_103754.1 I 0.746
Carubv10012215m.g Capsella rubella Carubv10012215m.g I 0.745
TCM_036269 Theobroma cacao TCM_036269 I 0.743
evm.TU.supercontig_21.70 Carica papaya evm.TU.supercontig_21.70 I 0.741
Lus10002953.g Linum usitatissimum Lus10002953.g I 0.739
evm.TU.supercontig_21.69 Carica papaya evm.TU.supercontig_21.69 I 0.739
cassava8552.m1 Manihot esculenta cassava8552.m1 I 0.733
Gorai.009G266600 Gossypium raimondii Gorai.009G266600 I 0.733
SapurV1A.1130s0090 Salix purpurea SapurV1A.1130s0090 I 0.732
Gorai.005G116500 Gossypium raimondii Gorai.005G116500 I 0.732
SapurV1A.1331s0050 Salix purpurea SapurV1A.1331s0050 I 0.732
POPTR_0013s10340 Populus trichocarpa POPTR_0013s10340 I 0.731
gene27021-v1.0-hybrid Fragaria vesca gene27021-v1.0-hybrid I 0.730
Bra010210 Brassica rapa Bra010210 I 0.730
SapurV1A.0551s0030 Salix purpurea SapurV1A.0551s0030 I 0.728
GLYMA01G44130 Glycine max GLYMA01G44130 I 0.728
SapurV1A.1130s0100 Salix purpurea SapurV1A.1130s0100 I 0.727
POPTR_0019s10420 Populus trichocarpa POPTR_0019s10420 I 0.727
MTR_5g008590 Medicago truncatula MTR_5g008590 I 0.727
GLYMA01G44140 Glycine max GLYMA01G44140 I 0.727
SapurV1A.1331s0040 Salix purpurea SapurV1A.1331s0040 I 0.727
gene27017-v1.0-hybrid Fragaria vesca gene27017-v1.0-hybrid I 0.727
GLYMA11G01640 Glycine max GLYMA11G01640 I 0.727
chr2.CM0018.470.nd Lotus japonicus chr2.CM0018.470.nd I 0.727
28118.m000034 Ricinus communis 28118.m000034 I 0.727
PRUPE_ppa018178mg Prunus persica PRUPE_ppa018178mg I 0.725
Pm004272 Prunus mume Pm004272 I 0.724
orange1.1g035756m.g Citrus sinensis orange1.1g035756m.g I 0.724
Ciclev10023857m.g Citrus clementina Ciclev10023857m.g I 0.724
Gorai.009G266700 Gossypium raimondii Gorai.009G266700 I 0.724
PGSC0003DMG400017813 Solanum tuberosum PGSC0003DMG400017813 I 0.723
Bo5g086680 Brassica oleracea Bo5g086680 I 0.723
cassava43172.valid.m1 Manihot esculenta cassava43172.valid.m1 I 0.723
VIT_18s0001g05850 Vitis vinifera VIT_18s0001g05850 I 0.720
PGSC0003DMG400018054 Solanum tuberosum PGSC0003DMG400018054 I 0.720
PRUPE_ppa012354mg Prunus persica PRUPE_ppa012354mg I 0.718
Pm004269 Prunus mume Pm004269 I 0.718
Cla012665 Citrullus lanatus Cla012665 I 0.716
Cucsa.237150 Cucumis sativus Cucsa.237150 I 0.716
TCM_036270 Theobroma cacao TCM_036270 I 0.715
MDP0000283350 Malus domestica MDP0000283350 I 0.715
Eucgr.F02974 Eucalyptus grandis Eucgr.F02974 I 0.715
Bra007975 Brassica rapa Bra007975 I 0.714
Bo2g072910 Brassica oleracea Bo2g072910 I 0.714
Carubv10022349m.g Capsella rubella Carubv10022349m.g I 0.714
chr2.CM0018.610.nd Lotus japonicus chr2.CM0018.610.nd I 0.714
fgenesh2_kg.2__1406__AT1G71450.1 Arabidopsis lyrata fgenesh2_kg.2__1406__AT1G71450.1 I 0.714
Lus10041052.g Linum usitatissimum Lus10041052.g N 0.714
ERF021 Arabidopsis thaliana AT1G71450 D 0.714
Cagra.2418s0001 Capsella grandiflora Cagra.2418s0001 I 0.714
MDP0000151428 Malus domestica MDP0000151428 I 0.712
MDP0000122740 Malus domestica MDP0000122740 I 0.712
MDP0000122739 Malus domestica MDP0000122739 I 0.712
Eucgr.F02975 Eucalyptus grandis Eucgr.F02975 I 0.711
Thhalv10019659m.g Eutrema salsugineum Thhalv10019659m.g I 0.711
Eucgr.F02976 Eucalyptus grandis Eucgr.F02976 I 0.710
POPTR_0001s18180 Populus trichocarpa POPTR_0001s18180 I 0.709
SapurV1A.3106s0010 Salix purpurea SapurV1A.3106s0010 I 0.708
POPTR_0013s10330 Populus trichocarpa POPTR_0013s10330 I 0.708
SapurV1A.0551s0040 Salix purpurea SapurV1A.0551s0040 I 0.708
POPTR_0019s10430 Populus trichocarpa POPTR_0019s10430 I 0.708
Lus10006173.g Linum usitatissimum Lus10006173.g I 0.704
Solyc11g042580.1 Solanum lycopersicum Solyc11g042580.1 I 0.704
Lus10003513.g Linum usitatissimum Lus10003513.g N 0.703
Bra016136 Brassica rapa Bra016136 I 0.702
OB11G16300 Oryza brachyantha OB11G16300 I 0.700
AC198403.3_FG001 Zea mays AC198403.3_FG001 I 0.699
Lus10041050.g Linum usitatissimum Lus10041050.g I 0.698
cassava45911.m1 Manihot esculenta cassava45911.m1 I 0.696
AMTR_s00021p00223240 Amborella trichopoda AMTR_s00021p00223240 I 0.695
Bo6g113020 Brassica oleracea Bo6g113020 I 0.694
27805.m000021 Ricinus communis 27805.m000021 I 0.693
LPERR11G07100 Leersia perrieri LPERR11G07100 I 0.692
BRADI4G21265 Brachypodium distachyon BRADI4G21265 I 0.692
OPUNC11G07750 Oryza punctata OPUNC11G07750 I 0.691
Pavir.J22217 Panicum virgatum Pavir.J22217 I 0.691
Pavir.J26137 Panicum virgatum Pavir.J26137 I 0.691
Sb05g007135 Sorghum bicolor Sb05g007135 I 0.691
Si026882m.g Setaria italica Si026882m.g I 0.691
BGIOSGA034227 Oryza indica BGIOSGA034227 I 0.691
OMERI11G06840 Oryza meridionalis OMERI11G06840 I 0.691
OGLUM11G07800 Oryza glumaepatula OGLUM11G07800 I 0.691
GSMUA_Achr2G20760_001 Musa acuminata GSMUA_Achr2G20760_001 I 0.691
ORUFI11G08240 Oryza rufipogon ORUFI11G08240 I 0.691
OS11G0242300 Oryza sativa OS11G0242300 I 0.691
ORGLA11G0070000 Oryza glaberrima ORGLA11G0070000 I 0.691
ONIVA11G08160 Oryza nivara ONIVA11G08160 I 0.691
Solyc11g042560.1 Solanum lycopersicum Solyc11g042560.1 I 0.690
Ca_15064 Cicer arietinum Ca_15064 I 0.690
POPTR_0003s05300 Populus trichocarpa POPTR_0003s05300 I 0.689
Cucsa.237170 Cucumis sativus Cucsa.237170 I 0.689
Cla012661 Citrullus lanatus Cla012661 I 0.689
GSMUA_Achr8G16250_001 Musa acuminata GSMUA_Achr8G16250_001 I 0.689
Traes_4AL_D2D7703821 Triticum aestivum Traes_4AL_D2D7703821 I 0.687
MLOC_55144 Hordeum vulgare MLOC_55144 I 0.687
Traes_4BS_DD5E68382 Triticum aestivum Traes_4BS_DD5E68382 I 0.687
TRIUR3_32331 Triticum urartu TRIUR3_32331 I 0.687
Traes_4DS_97AC77E13 Triticum aestivum Traes_4DS_97AC77E13 I 0.687
F775_17299 Aegilops tauschii F775_17299 I 0.687
orange1.1g046901m.g Citrus sinensis orange1.1g046901m.g I 0.686
Ciclev10024063m.g Citrus clementina Ciclev10024063m.g I 0.686
GSMUA_Achr11G12650_001 Musa acuminata GSMUA_Achr11G12650_001 N 0.682
LPERR04G10650 Leersia perrieri LPERR04G10650 N 0.680
ORGLA04G0108200 Oryza glaberrima ORGLA04G0108200 N 0.680
VIT_18s0001g05890 Vitis vinifera VIT_18s0001g05890 I 0.680
ORUFI04G15010 Oryza rufipogon ORUFI04G15010 N 0.680
ONIVA04G11950 Oryza nivara ONIVA04G11950 N 0.680
OMERI04G12360 Oryza meridionalis OMERI04G12360 N 0.680
MTR_5g008550 Medicago truncatula MTR_5g008550 I 0.679