AMTR_s00150p00091360 (Amborella trichopoda)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 AMTR_s00150p00091360 T000397_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF003
M06667_2.00
Arabidopsis thaliana
DYCDCCRCCGYMDHHDYHN

NDRHDDHKRCGGYGGHGRH
Dap-seq
OMalley et al.(2016)
ESE3_col_a
0.847 0.961
ERF003
M06668_2.00
Arabidopsis thaliana
HDYCKCCGCCGYHDH

DHDRCGGCGGMGRHD
Dap-seq
OMalley et al.(2016)
ESE3_colamp_a
0.847 0.961
WIN1
M01603_2.00
Arabidopsis thaliana
VCRCCGCNNN

NNNGCGGYGB
PBM
Weirauch et al.(2014)
pTH7566
0.717 0.804
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ERN08462 AP2 5 56

Links

Other AP2 family TFs
Other Amborella trichopoda TFs

295 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
A1O9_06673 Exophiala aquamarina A1O9_06673 N 0.000
AB10188.1 Alternaria brassicicola AB10188.1 N 0.000
COCCADRAFT_89699 Bipolaris zeicola COCCADRAFT_89699 N 0.000
COCMIDRAFT_91450 Bipolaris oryzae COCMIDRAFT_91450 N 0.000
COCSADRAFT_121543 Bipolaris sorokiniana COCSADRAFT_121543 N 0.000
COCVIDRAFT_34173 Bipolaris victoriae COCVIDRAFT_34173 N 0.000
e_gw1.34.5.1 Cochliobolus heterostrophus C5 e_gw1.34.5.1 N 0.000
PTRG_03860 Pyrenophora triticirepentis PTRG_03860 N 0.000
SETTUDRAFT_41056 Setosphaeria turcica SETTUDRAFT_41056 N 0.000