CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ERF017
(
Arabidopsis thaliana
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
AT1G19210
T000410_2.00
Ensembl (2018-Dec-8)
Link out
NCBI Gene Info:
Similar to a putative transcription factor and transcriptional coactivators. Repressor of GA responses and involved in gibberellic acid mediated signaling. Member of the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. The protein undergoes degradation in response to GA via the 26S proteasome. GAI may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Represses GA-induced vegetative growth and floral initiation. Rapidly degraded in response to GA.
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ERF017
M06568_2.00
Arabidopsis thaliana
NHNYCRCCGWCMWH
DWKGWCGGYGRNDN
Dap-seq
OMalley et al.(2016)
At1g19210_col_a
(Direct)
(Direct)
ERF017
M06569_2.00
Arabidopsis thaliana
NNNHNNCRCCGWCMW
WKGWCGGYGNNDNNN
Dap-seq
OMalley et al.(2016)
At1g19210_colamp_a
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ERF018
M00842_2.00
Arabidopsis thaliana
HRCCGDCMN
NKGHCGGYD
PBM
Franco-Zorrilla et al.(2014)
ORA47
0.803
0.920
ERF018
M01610_2.00
Arabidopsis thaliana
NRCCGNCHN
NDGNCGGYN
PBM
Weirauch et al.(2014)
pTH7215
0.803
0.920
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT1G19210.1
AP2
10
61
SKYKGVRKRKWGKWVSEIRLPNSRERIWLGSYDTPEKAARAFDAALYCLRGN
Links
Other
AP2
family TFs
Other
Arabidopsis thaliana
TFs
157 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cagra.1961s0079
Capsella grandiflora
Cagra.1961s0079
I
0.829
Carubv10011394m.g
Capsella rubella
Carubv10011394m.g
I
0.829
fgenesh2_kg.1__2098__AT1G19210.1
Arabidopsis lyrata
fgenesh2_kg.1__2098__AT1G19210.1
I
0.829
SapurV1A.0373s0040
Salix purpurea
SapurV1A.0373s0040
I
0.822
POPTR_0006s23480
Populus trichocarpa
POPTR_0006s23480
I
0.822
SapurV1A.2229s0010
Salix purpurea
SapurV1A.2229s0010
I
0.822
gene12919-v1.0-hybrid
Fragaria vesca
gene12919-v1.0-hybrid
I
0.821
cassava10604.m1
Manihot esculenta
cassava10604.m1
I
0.819
evm.TU.supercontig_266.5
Carica papaya
evm.TU.supercontig_266.5
I
0.818
SapurV1A.0057s0300
Salix purpurea
SapurV1A.0057s0300
I
0.818
Aquca_076_00039
Aquilegia coerulea
Aquca_076_00039
I
0.812
VIT_11s0016g00660
Vitis vinifera
VIT_11s0016g00660
I
0.811
cassava20547.m1
Manihot esculenta
cassava20547.m1
I
0.810
Bra031069
Brassica rapa
Bra031069
I
0.810
Bo8g102870
Brassica oleracea
Bo8g102870
I
0.810
ORA47
Vitis vinifera
VIT_04s0008g02230
I
0.809
Thhalv10009812m.g
Eutrema salsugineum
Thhalv10009812m.g
I
0.809
Bra016518
Brassica rapa
Bra016518
I
0.809
Bo8g068370
Brassica oleracea
Bo8g068370
I
0.809
Gorai.001G019100
Gossypium raimondii
Gorai.001G019100
I
0.808
TCM_037415
Theobroma cacao
TCM_037415
I
0.808
POPTR_0018s08320
Populus trichocarpa
POPTR_0018s08320
I
0.806
Bostr.7128s0526
Boechera stricta
Bostr.7128s0526
I
0.805
Bostr.3288s0141
Boechera stricta
Bostr.3288s0141
I
0.803
ERF018
Arabidopsis thaliana
AT1G74930
D
0.803
ORA47
Arabidopsis lyrata
fgenesh2_kg.2__1761__AT1G74930.1
I
0.803
Lus10009798.g
Linum usitatissimum
Lus10009798.g
I
0.803
Lus10038082.g
Linum usitatissimum
Lus10038082.g
I
0.803
mgf024162m
Mimulus guttatus
mgf024162m
I
0.801
MTR_1g014800
Medicago truncatula
MTR_1g014800
I
0.800
chr5.CM0040.40.nd
Lotus japonicus
chr5.CM0040.40.nd
I
0.799
Bo6g119120
Brassica oleracea
Bo6g119120
I
0.798
TCM_037486
Theobroma cacao
TCM_037486
I
0.798
mgf021940m
Mimulus guttatus
mgf021940m
I
0.798
Bra003780
Brassica rapa
Bra003780
I
0.796
POPTR_0006s14090
Populus trichocarpa
POPTR_0006s14090
I
0.795
Bo6g086740
Brassica oleracea
Bo6g086740
I
0.795
MDP0000704216
Malus domestica
MDP0000704216
I
0.795
POPTR_0006s14100
Populus trichocarpa
POPTR_0006s14100
I
0.795
Bra015882
Brassica rapa
Bra015882
I
0.795
Cagra.0402s0035
Capsella grandiflora
Cagra.0402s0035
I
0.795
Carubv10020965m.g
Capsella rubella
Carubv10020965m.g
I
0.795
cassava25057.valid.m1
Manihot esculenta
cassava25057.valid.m1
I
0.795
Ciclev10010348m.g
Citrus clementina
Ciclev10010348m.g
I
0.794
Gorai.004G285900
Gossypium raimondii
Gorai.004G285900
I
0.793
Eucgr.C03297
Eucalyptus grandis
Eucgr.C03297
I
0.792
29739.m003716
Ricinus communis
29739.m003716
I
0.792
Pm027117
Prunus mume
Pm027117
I
0.792
PRUPE_ppa011336mg
Prunus persica
PRUPE_ppa011336mg
I
0.792
MTR_1g014820
Medicago truncatula
MTR_1g014820
I
0.792
MTR_1g014860
Medicago truncatula
MTR_1g014860
I
0.792
MDP0000649022
Malus domestica
MDP0000649022
I
0.790
GLYMA17G33535
Glycine max
GLYMA17G33535
I
0.788
29739.m003647
Ricinus communis
29739.m003647
I
0.788
Eucgr.C00780
Eucalyptus grandis
Eucgr.C00780
I
0.788
Gorai.001G016800
Gossypium raimondii
Gorai.001G016800
I
0.788
mgf025452m
Mimulus guttatus
mgf025452m
I
0.787
Ca_09124
Cicer arietinum
Ca_09124
I
0.786
Ciclev10009540m.g
Citrus clementina
Ciclev10009540m.g
I
0.786
orange1.1g029068m.g
Citrus sinensis
orange1.1g029068m.g
I
0.786
SapurV1A.0521s0050
Salix purpurea
SapurV1A.0521s0050
I
0.786
Gorai.010G091100
Gossypium raimondii
Gorai.010G091100
I
0.785
Ca_01683
Cicer arietinum
Ca_01683
I
0.785
Lus10033420.g
Linum usitatissimum
Lus10033420.g
I
0.784
GLYMA04G06095
Glycine max
GLYMA04G06095
I
0.784
Lus10034885.g
Linum usitatissimum
Lus10034885.g
I
0.784
Thhalv10019652m.g
Eutrema salsugineum
Thhalv10019652m.g
I
0.784
GLYMA06G06101
Glycine max
GLYMA06G06101
I
0.784
AMTR_s00007p00268280
Amborella trichopoda
AMTR_s00007p00268280
I
0.781
GLYMA14G12505
Glycine max
GLYMA14G12505
I
0.780
GLYMA17G05240
Glycine max
GLYMA17G05240
I
0.778
Solyc12g009240.1
Solanum lycopersicum
Solyc12g009240.1
I
0.776
GLYMA13G17250
Glycine max
GLYMA13G17250
I
0.776
PGSC0003DMG400002899
Solanum tuberosum
PGSC0003DMG400002899
I
0.776
Bo2g023630
Brassica oleracea
Bo2g023630
I
0.776
Bra025719
Brassica rapa
Bra025719
I
0.775
Bra020162
Brassica rapa
Bra020162
I
0.773
Pavir.J00593
Panicum virgatum
Pavir.J00593
I
0.770
Si019636m.g
Setaria italica
Si019636m.g
I
0.770
Pavir.Aa00296
Panicum virgatum
Pavir.Aa00296
I
0.770
Cla007584
Citrullus lanatus
Cla007584
I
0.770
Gorai.013G222700
Gossypium raimondii
Gorai.013G222700
I
0.770
GRMZM2G097081
Zea mays
GRMZM2G097081
I
0.766
Cla011318
Citrullus lanatus
Cla011318
I
0.764
Cucsa.141980
Cucumis sativus
Cucsa.141980
I
0.764
GLYMA09G08330
Glycine max
GLYMA09G08330
I
0.762
Bra006599
Brassica rapa
Bra006599
I
0.761
Bo3g015600
Brassica oleracea
Bo3g015600
I
0.761
LPERR02G28660
Leersia perrieri
LPERR02G28660
I
0.760
GLYMA15G19910
Glycine max
GLYMA15G19910
I
0.759
Bostr.26527s0082
Boechera stricta
Bostr.26527s0082
I
0.758
Carubv10001903m.g
Capsella rubella
Carubv10001903m.g
I
0.758
Bra002377
Brassica rapa
Bra002377
I
0.758
scaffold_602234.1
Arabidopsis lyrata
scaffold_602234.1
I
0.758
Bo9g149820
Brassica oleracea
Bo9g149820
I
0.758
MTR_2g043050
Medicago truncatula
MTR_2g043050
I
0.756
MTR_3g105510
Medicago truncatula
MTR_3g105510
I
0.752
ERF016
Arabidopsis thaliana
AT5G21960
I
0.752
Thhalv10015465m.g
Eutrema salsugineum
Thhalv10015465m.g
I
0.752
MTR_3g105480
Medicago truncatula
MTR_3g105480
I
0.752
chr1.CM0133.1010.nc
Lotus japonicus
chr1.CM0133.1010.nc
I
0.751
Cucsa.271180
Cucumis sativus
Cucsa.271180
I
0.750
Eucgr.C03175
Eucalyptus grandis
Eucgr.C03175
I
0.748
Traes_6DL_FA861D610
Triticum aestivum
Traes_6DL_FA861D610
I
0.748
PK18548.1
Cannabis sativa
PK18548.1
I
0.748
Ca_19295
Cicer arietinum
Ca_19295
I
0.744
MTR_2g043030
Medicago truncatula
MTR_2g043030
I
0.742
chr6.CM0420.30.nd
Lotus japonicus
chr6.CM0420.30.nd
I
0.742
MTR_2g043040
Medicago truncatula
MTR_2g043040
I
0.742
Ca_19297
Cicer arietinum
Ca_19297
I
0.740
Ca_19296
Cicer arietinum
Ca_19296
I
0.738
Si008104m.g
Setaria italica
Si008104m.g
I
0.737
GSMUA_AchrUn_randomG02200_001
Musa acuminata
GSMUA_AchrUn_randomG02200_001
I
0.736
Gorai.004G285200
Gossypium raimondii
Gorai.004G285200
I
0.734
GSMUA_Achr5G05160_001
Musa acuminata
GSMUA_Achr5G05160_001
I
0.731
PGSC0003DMG400030781
Solanum tuberosum
PGSC0003DMG400030781
I
0.728
Solyc06g054630.1
Solanum lycopersicum
Solyc06g054630.1
I
0.728
Cucsa.055920
Cucumis sativus
Cucsa.055920
I
0.728
Cla022291
Citrullus lanatus
Cla022291
I
0.728
MTR_1g014780
Medicago truncatula
MTR_1g014780
I
0.726
OGLUM02G35980
Oryza glumaepatula
OGLUM02G35980
I
0.724
ORGLA02G0301600
Oryza glaberrima
ORGLA02G0301600
I
0.724
OPUNC02G32160
Oryza punctata
OPUNC02G32160
I
0.724
ONIVA02G36910
Oryza nivara
ONIVA02G36910
I
0.724
OMERI01G37050
Oryza meridionalis
OMERI01G37050
I
0.724
OS02G0781300
Oryza sativa
OS02G0781300
I
0.724
ORUFI02G36340
Oryza rufipogon
ORUFI02G36340
I
0.724
BGIOSGA005486
Oryza indica
BGIOSGA005486
I
0.724
Traes_6AL_E6DAE246D
Triticum aestivum
Traes_6AL_E6DAE246D
I
0.718
MTR_2g043020
Medicago truncatula
MTR_2g043020
I
0.710
GSMUA_Achr9G14360_001
Musa acuminata
GSMUA_Achr9G14360_001
I
0.703
Aquca_076_00040
Aquilegia coerulea
Aquca_076_00040
I
0.701
MTR_7g028925
Medicago truncatula
MTR_7g028925
I
0.697
OGLUM08G17690
Oryza glumaepatula
OGLUM08G17690
I
0.691
OB08G24280
Oryza brachyantha
OB08G24280
I
0.691
BGIOSGA028781
Oryza indica
BGIOSGA028781
I
0.691
Pavir.Fa00741
Panicum virgatum
Pavir.Fa00741
I
0.691
OBART08G16950
Oryza barthii
OBART08G16950
I
0.691
Pavir.Fb01602
Panicum virgatum
Pavir.Fb01602
I
0.691
ORUFI08G18850
Oryza rufipogon
ORUFI08G18850
I
0.691
OS08G0454000
Oryza sativa
OS08G0454000
I
0.691
Si015027m.g
Setaria italica
Si015027m.g
I
0.691
OPUNC08G14840
Oryza punctata
OPUNC08G14840
I
0.691
ONIVA08G18470
Oryza nivara
ONIVA08G18470
I
0.691
LPERR08G14000
Leersia perrieri
LPERR08G14000
I
0.691
GRMZM2G163745
Zea mays
GRMZM2G163745
I
0.691
ORUFI06G06480
Oryza rufipogon
ORUFI06G06480
I
0.688
BGIOSGA022471
Oryza indica
BGIOSGA022471
I
0.688
OBART06G06190
Oryza barthii
OBART06G06190
I
0.688
OGLUM06G06520
Oryza glumaepatula
OGLUM06G06520
I
0.688
ONIVA06G07190
Oryza nivara
ONIVA06G07190
I
0.688
ORGLA06G0057200
Oryza glaberrima
ORGLA06G0057200
I
0.688
OMERI03G32210
Oryza meridionalis
OMERI03G32210
I
0.688
TRAES3BF084200010CFD_g
Triticum aestivum
TRAES3BF084200010CFD_g
I
0.684
BRADI3G37544
Brachypodium distachyon
BRADI3G37544
I
0.682
F775_23111
Aegilops tauschii
F775_23111
I
0.681
Sb07g022265
Sorghum bicolor
Sb07g022265
I
0.677