CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ERF019
(
Arabidopsis thaliana
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
AT1G22810
T000413_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ERF019
M01092_2.00
Arabidopsis thaliana
CRCCGRCV
BGYCGGYG
PBM
Lambert et al.(2019)
pTH11534
(Direct)
(Direct)
ERF019
M06571_2.00
Arabidopsis thaliana
HDYCACCGACAHNNN
NNNDTGTCGGTGRHD
Dap-seq
OMalley et al.(2016)
At1g22810_colamp_a
(Direct)
(Direct)
ERF019
M06572_2.00
Arabidopsis thaliana
DYCACCGHCRHHDYC
GRHDDYGDCGGTGRH
Dap-seq
OMalley et al.(2016)
At1g22810_col
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.677
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M01092_2.00
AP2
12
63
SKYKGIRRRKWGKWVSEIRVPGTRDRLWLGSFSTAEGAAVAHDVAFFCLHQP
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT1G22810.1
AP2
12
63
SKYKGIRRRKWGKWVSEIRVPGTRDRLWLGSFSTAEGAAVAHDVAFFCLHQP
Links
Other
AP2
family TFs
Other
Arabidopsis thaliana
TFs
40 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy