TEM1 (Arabidopsis thaliana)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 AT1G25560 T000416_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TEM1
M01605_2.00		 Arabidopsis thaliana
RCAACATW
WATGTTGY		 PBM
Weirauch et al.(2014)
pTH8264		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAV1
M01645_2.00 		Arabidopsis thaliana
NNNNVDCABN
NVTGHBNNNN		 PBM
Weirauch et al.(2014)
pTH8249 		0.879 0.878
RAV2
M01609_2.00 		Arabidopsis thaliana
RCAACATH
DATGTTGY		 PBM
Weirauch et al.(2014)
pTH8279 		0.875 0.939
ARF14
M01647_2.00 		Arabidopsis thaliana
NNVACAKN
NMTGTBNN		 PBM
Weirauch et al.(2014)
pTH8296 		0.865 0.837
For this family, TFs with SR scores > 0.677 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01605_2.00 AP2 51 100

DNA Binding Domains

Protein ID Domain From To Sequence
AT1G25560.1 AP2 70 119

Links

Other AP2 family TFs
Other Arabidopsis thaliana TFs

6 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
RAV2 Arabidopsis thaliana AT1G68840 D 0.875
OLONG_017837 Oryza longistaminata OLONG_017837 I 0.728
Si039493m.g Setaria italica Si039493m.g I 0.715
Traes_4BL_5B2AF2556 Triticum aestivum Traes_4BL_5B2AF2556 I 0.697
Traes_4DL_FE7B7E018 Triticum aestivum Traes_4DL_FE7B7E018 I 0.697
Pavir.J21533 Panicum virgatum Pavir.J21533 I 0.695