ERF022 (Arabidopsis thaliana)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 AT1G33760 T000420_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
A member of class I knotted1-like homeobox gene family (together with KNAT1). Similar to the knotted1 (kn1) homeobox gene of maize. KNAT2 acts synergistically with cytokinins and antagonistically with ethylene based on ectopic expression studies in different mutant backgrounds and hormone treatments. In addition, KNAT2 is negatively regulated by AS and YABBY genes. KNAT2 is strongly expressed in the shoot apex of seedlings, while in mature plants the gene is primarily expressed in flowers and inflorescence stems.

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF021
M06593_2.00
Arabidopsis thaliana
HNYCDYCDYCDYCRCCGHCD

HGDCGGYGRHGRHGRHGRND
Dap-seq
OMalley et al.(2016)
AT1G71450_col_a
0.717 0.780
ERF021
M06594_2.00
Arabidopsis thaliana
NHNNCRCCGHCDH

DHGDCGGYGNNDN
Dap-seq
OMalley et al.(2016)
AT1G71450_colamp_a
0.717 0.780
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT1G33760.1 AP2 18 69

Links

Other AP2 family TFs
Other Arabidopsis thaliana TFs

117 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Bo8g027240 Brassica oleracea Bo8g027240 I 0.816
Thhalv10010002m.g Eutrema salsugineum Thhalv10010002m.g I 0.809
Bostr.3359s0006 Boechera stricta Bostr.3359s0006 I 0.798
Bra028009 Brassica rapa Bra028009 I 0.788
Carubv10011715m.g Capsella rubella Carubv10011715m.g I 0.788
Carubv10012215m.g Capsella rubella Carubv10012215m.g I 0.787
Bo6g046850 Brassica oleracea Bo6g046850 I 0.782
scaffold_103754.1 Arabidopsis lyrata scaffold_103754.1 I 0.777
evm.TU.supercontig_21.70 Carica papaya evm.TU.supercontig_21.70 I 0.775
SapurV1A.1130s0090 Salix purpurea SapurV1A.1130s0090 I 0.773
TCM_036269 Theobroma cacao TCM_036269 I 0.773
SapurV1A.1331s0050 Salix purpurea SapurV1A.1331s0050 I 0.773
Bra010210 Brassica rapa Bra010210 I 0.772
Gorai.009G266600 Gossypium raimondii Gorai.009G266600 I 0.769
AMTR_s00099p00039760 Amborella trichopoda AMTR_s00099p00039760 I 0.769
Gorai.009G266700 Gossypium raimondii Gorai.009G266700 I 0.764
evm.TU.supercontig_21.69 Carica papaya evm.TU.supercontig_21.69 I 0.761
VIT_18s0001g05850 Vitis vinifera VIT_18s0001g05850 I 0.760
Pm004272 Prunus mume Pm004272 I 0.756
Bo5g086680 Brassica oleracea Bo5g086680 I 0.756
TCM_036270 Theobroma cacao TCM_036270 I 0.755
PRUPE_ppa018178mg Prunus persica PRUPE_ppa018178mg I 0.755
GLYMA01G44130 Glycine max GLYMA01G44130 I 0.754
PRUPE_ppa012354mg Prunus persica PRUPE_ppa012354mg I 0.754
POPTR_0019s10420 Populus trichocarpa POPTR_0019s10420 I 0.754
PGSC0003DMG400017813 Solanum tuberosum PGSC0003DMG400017813 I 0.754
SapurV1A.1331s0040 Salix purpurea SapurV1A.1331s0040 I 0.754
cassava8552.m1 Manihot esculenta cassava8552.m1 I 0.754
cassava43172.valid.m1 Manihot esculenta cassava43172.valid.m1 I 0.754
Pm004269 Prunus mume Pm004269 I 0.754
SapurV1A.1130s0100 Salix purpurea SapurV1A.1130s0100 I 0.754
Cla012665 Citrullus lanatus Cla012665 I 0.753
PGSC0003DMG400018054 Solanum tuberosum PGSC0003DMG400018054 I 0.751
gene27021-v1.0-hybrid Fragaria vesca gene27021-v1.0-hybrid I 0.750
POPTR_0013s10340 Populus trichocarpa POPTR_0013s10340 I 0.749
Lus10002953.g Linum usitatissimum Lus10002953.g I 0.748
Cucsa.237150 Cucumis sativus Cucsa.237150 I 0.748
gene27017-v1.0-hybrid Fragaria vesca gene27017-v1.0-hybrid I 0.747
Ciclev10023857m.g Citrus clementina Ciclev10023857m.g I 0.746
orange1.1g035756m.g Citrus sinensis orange1.1g035756m.g I 0.746
MTR_5g008590 Medicago truncatula MTR_5g008590 I 0.745
GLYMA11G01640 Glycine max GLYMA11G01640 I 0.745
POPTR_0001s18180 Populus trichocarpa POPTR_0001s18180 I 0.745
GLYMA01G44140 Glycine max GLYMA01G44140 I 0.745
chr2.CM0018.470.nd Lotus japonicus chr2.CM0018.470.nd I 0.745
MDP0000122739 Malus domestica MDP0000122739 I 0.743
MDP0000122740 Malus domestica MDP0000122740 I 0.743
MDP0000151428 Malus domestica MDP0000151428 I 0.743
Eucgr.F02974 Eucalyptus grandis Eucgr.F02974 I 0.742
Eucgr.F02976 Eucalyptus grandis Eucgr.F02976 I 0.741
SapurV1A.3106s0010 Salix purpurea SapurV1A.3106s0010 I 0.739
POPTR_0019s10430 Populus trichocarpa POPTR_0019s10430 I 0.739
SapurV1A.0551s0040 Salix purpurea SapurV1A.0551s0040 I 0.739
POPTR_0013s10330 Populus trichocarpa POPTR_0013s10330 I 0.739
Gorai.005G116500 Gossypium raimondii Gorai.005G116500 I 0.738
cassava45911.m1 Manihot esculenta cassava45911.m1 I 0.737
MDP0000283350 Malus domestica MDP0000283350 I 0.736
Eucgr.F02975 Eucalyptus grandis Eucgr.F02975 I 0.735
Solyc11g042580.1 Solanum lycopersicum Solyc11g042580.1 I 0.735
chr2.CM0018.610.nd Lotus japonicus chr2.CM0018.610.nd I 0.735
28118.m000034 Ricinus communis 28118.m000034 I 0.734
27805.m000021 Ricinus communis 27805.m000021 I 0.734
SapurV1A.0551s0030 Salix purpurea SapurV1A.0551s0030 I 0.733
Lus10041052.g Linum usitatissimum Lus10041052.g N 0.730
Cla012661 Citrullus lanatus Cla012661 I 0.729
POPTR_0003s05300 Populus trichocarpa POPTR_0003s05300 I 0.729
Cucsa.237170 Cucumis sativus Cucsa.237170 I 0.729
Si026882m.g Setaria italica Si026882m.g I 0.720
ERF021 Arabidopsis thaliana AT1G71450 D 0.717
Carubv10022349m.g Capsella rubella Carubv10022349m.g I 0.717
Bra007975 Brassica rapa Bra007975 I 0.717
fgenesh2_kg.2__1406__AT1G71450.1 Arabidopsis lyrata fgenesh2_kg.2__1406__AT1G71450.1 I 0.717
Cagra.2418s0001 Capsella grandiflora Cagra.2418s0001 I 0.717
Bo2g072910 Brassica oleracea Bo2g072910 I 0.717
Solyc11g042560.1 Solanum lycopersicum Solyc11g042560.1 I 0.715
Lus10006173.g Linum usitatissimum Lus10006173.g I 0.715
Thhalv10019659m.g Eutrema salsugineum Thhalv10019659m.g I 0.713
AC198403.3_FG001 Zea mays AC198403.3_FG001 I 0.713
Lus10003513.g Linum usitatissimum Lus10003513.g N 0.712
Lus10041050.g Linum usitatissimum Lus10041050.g I 0.710
Ciclev10024063m.g Citrus clementina Ciclev10024063m.g I 0.707
orange1.1g046901m.g Citrus sinensis orange1.1g046901m.g I 0.707
Bra016136 Brassica rapa Bra016136 I 0.707
MTR_5g008550 Medicago truncatula MTR_5g008550 I 0.705
VIT_18s0001g05890 Vitis vinifera VIT_18s0001g05890 I 0.703
GSMUA_Achr2G20760_001 Musa acuminata GSMUA_Achr2G20760_001 I 0.702
LPERR11G07100 Leersia perrieri LPERR11G07100 I 0.701
ONIVA11G08160 Oryza nivara ONIVA11G08160 I 0.700
OPUNC11G07750 Oryza punctata OPUNC11G07750 I 0.700
OMERI11G06840 Oryza meridionalis OMERI11G06840 I 0.700
OB11G16300 Oryza brachyantha OB11G16300 I 0.700
ORGLA11G0070000 Oryza glaberrima ORGLA11G0070000 I 0.700
OGLUM11G07800 Oryza glumaepatula OGLUM11G07800 I 0.700
BGIOSGA034227 Oryza indica BGIOSGA034227 I 0.700
Pavir.J22217 Panicum virgatum Pavir.J22217 I 0.700
BRADI4G21265 Brachypodium distachyon BRADI4G21265 I 0.700
Pavir.J26137 Panicum virgatum Pavir.J26137 I 0.700
Sb05g007135 Sorghum bicolor Sb05g007135 I 0.700
Bo6g113020 Brassica oleracea Bo6g113020 I 0.700
OS11G0242300 Oryza sativa OS11G0242300 I 0.700
ORUFI11G08240 Oryza rufipogon ORUFI11G08240 I 0.700
Traes_4AL_D2D7703821 Triticum aestivum Traes_4AL_D2D7703821 I 0.695
F775_17299 Aegilops tauschii F775_17299 I 0.695
MLOC_55144 Hordeum vulgare MLOC_55144 I 0.695
Ca_15064 Cicer arietinum Ca_15064 I 0.695
Traes_4BS_DD5E68382 Triticum aestivum Traes_4BS_DD5E68382 I 0.695
Traes_4DS_97AC77E13 Triticum aestivum Traes_4DS_97AC77E13 I 0.695
TRIUR3_32331 Triticum urartu TRIUR3_32331 I 0.695
GSMUA_Achr11G12650_001 Musa acuminata GSMUA_Achr11G12650_001 N 0.693
OMERI04G12360 Oryza meridionalis OMERI04G12360 N 0.690
ORUFI04G15010 Oryza rufipogon ORUFI04G15010 N 0.690
ONIVA04G11950 Oryza nivara ONIVA04G11950 N 0.690
ORGLA04G0108200 Oryza glaberrima ORGLA04G0108200 N 0.690
LPERR04G10650 Leersia perrieri LPERR04G10650 N 0.689
GSMUA_Achr8G16250_001 Musa acuminata GSMUA_Achr8G16250_001 I 0.685
Bo6g094210 Brassica oleracea Bo6g094210 I 0.677
Bra003924 Brassica rapa Bra003924 I 0.677