RAP2-1 (Arabidopsis thaliana)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 AT1G46768 T000424_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RAP2-1
M06582_2.00
Arabidopsis thaliana
NHDYCRCCGMCAH

DTGKCGGYGRHDN
Dap-seq
OMalley et al.(2016)
RAP21_col_a
(Direct) (Direct)
RAP2-1
M06583_2.00
Arabidopsis thaliana
NHDBCACCGACAHHDNNNNN

NNNNNHDDTGTCGGTGVHDN
Dap-seq
OMalley et al.(2016)
RAP21_colamp_a
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RAP2-10
M00850_2.00
Arabidopsis thaliana
NNRCCGHCNN

NNGDCGGYNN
PBM
Franco-Zorrilla et al.(2014)
DEAR4
0.737 0.880
ERF010
M06690_2.00
Arabidopsis thaliana
HHNHHDYCACCGHCD

HGDCGGTGRHDDNDD
Dap-seq
OMalley et al.(2016)
DEAR2_col_a
0.736 0.880
ERF010
M06691_2.00
Arabidopsis thaliana
NNNHDBCACCGACAH

DTGTCGGTGVHDNNN
Dap-seq
OMalley et al.(2016)
DEAR2_colamp_a
0.736 0.880
ERF011
M06628_2.00
Arabidopsis thaliana
YHNHHDYCACCGHCN

NGDCGGTGRHDDNDR
Dap-seq
OMalley et al.(2016)
CEJ1_col_a
0.736 0.860
ERF011
M06629_2.00
Arabidopsis thaliana
NDNCACCGACMHH

DDKGTCGGTGNHN
Dap-seq
OMalley et al.(2016)
CEJ1_colamp_a
0.736 0.860
ERF008
M00844_2.00
Arabidopsis thaliana
SHRCCGHC

GDCGGYDS
PBM
Franco-Zorrilla et al.(2014)
DEAR3
0.734 0.880
ERF008
M01048_2.00
Arabidopsis thaliana
CRCCGMCN

NGKCGGYG
PBM
Sullivan et al.(2014)
pTH7672
0.734 0.880
ERF008
M06602_2.00
Arabidopsis thaliana
NNNNNBCACCGACAHHN

NDDTGTCGGTGVNNNNN
Dap-seq
OMalley et al.(2016)
DEAR3_col_a
0.734 0.880
ERF008
M06603_2.00
Arabidopsis thaliana
NNBCACCGACAWH

DWTGTCGGTGVNN
Dap-seq
OMalley et al.(2016)
DEAR3_colamp_a
0.734 0.880
RAP2-9
M06633_2.00
Arabidopsis thaliana
NNNNNNNDBCACCGACMHH

DDKGTCGGTGVHNNNNNNN
Dap-seq
OMalley et al.(2016)
DEAR5_col_a
0.715 0.860
RAP2-9
M06634_2.00
Arabidopsis thaliana
NCACCGACMHH

DDKGTCGGTGN
Dap-seq
OMalley et al.(2016)
DEAR5_colamp_a
0.715 0.860
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT1G46768.1 AP2 29 80
AT1G46768.2 AP2 29 80
AT1G46768.3 AP2 29 80

Links

Other AP2 family TFs
Other Arabidopsis thaliana TFs

161 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
A1O1_03071 Capronia coronata A1O1_03071 N 0.000
A1O3_03046 Capronia epimyces A1O3_03046 N 0.000
A1O5_03193 Cladophialophora psammophila A1O5_03193 N 0.000
A1O5_13173 Cladophialophora psammophila A1O5_13173 N 0.000
A1O7_04237 Cladophialophora yegresii A1O7_04237 N 0.000
ARB_07193 Arthroderma benhamiae ARB_07193 I 0.000
CADAFLAG00001251 Aspergillus flavus CADAFLAG00001251 I 0.000
AFUA_1G14945 Aspergillus fumigatus CADAFUAG00007115 I 0.000
CADANGAG00001307 Aspergillus niger CADANGAG00001307 I 0.000
ATEG_00855 Aspergillus terreus CADATEAG00009880 I 0.000
NFIA_010470 Neosartorya fischeri CADNFIAG00001085 I 0.000
COCC4DRAFT_82367 Bipolaris maydis COCC4DRAFT_82367 N 0.000
COCCADRAFT_19 Bipolaris zeicola COCCADRAFT_19 N 0.000
COCMIDRAFT_83785 Bipolaris oryzae COCMIDRAFT_83785 N 0.000
COCSADRAFT_33488 Bipolaris sorokiniana COCSADRAFT_33488 N 0.000
COCVIDRAFT_85661 Bipolaris victoriae COCVIDRAFT_85661 N 0.000
CORT_0A06750 Candida orthopsilosis CORT_0A06750 I 0.000
CPAG_01919 Candida parapsilosis CPAG_01919 I 0.000
DOTSEDRAFT_74920 Dothistroma septosporum DOTSEDRAFT_74920 N 0.000
estExt_fgenesh1_pg.C_120275 Bigelowiella natans estExt_fgenesh1_pg.C_120275 N 0.000
estExt_fgenesh1_pm.C_100124 Cochliobolus heterostrophus C5 estExt_fgenesh1_pm.C_100124 N 0.000
EURHEDRAFT_408314 Aspergillus ruber EURHEDRAFT_408314 I 0.000
e_gw1.00042.299.1 Aspergillus carbonarius e_gw1.00042.299.1 I 0.000
G647_04456 Cladophialophora carrionii G647_04456 N 0.000
gwh1.2.1.110.1 Pichia stipitis gwh1.2.1.110.1 I 0.000
H101_03578 Trichophyton interdigitale H101_03578 I 0.000
H102_07188 Trichophyton rubrum H102_07188 I 0.000
H105_07224 Trichophyton soudanense H105_07224 I 0.000
HMPREF1541_03246 Cyphellophora europaea HMPREF1541_03246 N 0.000
LELG_00667 Lodderomyces elongisporus LELG_00667 I 0.000
LEMA_P097060.1 Leptosphaeria maculans LEMA_P097060.1 N 0.000
MGYG_05652 Microsporum gypseum MGYG_05652 I 0.000
Pc03g00300 Penicillium chrysogenum Pc03g00300 N 0.000
Pc20g08400 Penicillium chrysogenum Pc20g08400 N 0.000
Pc22g26220 Penicillium chrysogenum Pc22g26220 N 0.000
PCH_Pc03g00300 Penicillium rubens PCH_Pc03g00300 N 0.000
PCH_Pc20g08400 Penicillium rubens PCH_Pc20g08400 N 0.000
PCH_Pc22g26220 Penicillium rubens PCH_Pc22g26220 N 0.000
PDE_01536 Penicillium oxalicum PDE_01536 N 0.000
PDIP_01400 Penicillium digitatum PDIP_01400 N 0.000
PEX1_038400 Penicillium expansum PEX1_038400 N 0.000
PEX1_089290 Penicillium expansum PEX1_089290 N 0.000
PICST_622 Scheffersomyces stipitis PICST_622 I 0.000
PTRG_06391 Pyrenophora triticirepentis PTRG_06391 N 0.000
PTT_16339 Pyrenophora teres PTT_16339 N 0.000
PV04_05192 Capronia semiimmersa PV04_05192 N 0.000
PV05_09327 Exophiala xenobiotica PV05_09327 N 0.000
PV07_07852 Cladophialophora immunda PV07_07852 N 0.000
PV10_00100 Exophiala mesophila PV10_00100 N 0.000
PV11_05699 Exophiala sideris PV11_05699 N 0.000
SETTUDRAFT_167519 Setosphaeria turcica SETTUDRAFT_167519 N 0.000
SNOG_12086 Stagonospora nodorum SNOG_12086 N 0.000
SNOG_12086 Phaeosphaeria nodorum SNOG_12086 N 0.000
TEQG_01597 Trichophyton equinum TEQG_01597 I 0.000
TESG_01899 Trichophyton tonsurans TESG_01899 I 0.000
TRV_03094 Trichophyton verrucosum TRV_03094 I 0.000
W97_04383 Coniosporium apollinis W97_04383 N 0.000
Z517_11872 Fonsecaea pedrosoi Z517_11872 N 0.000
Z518_09996 Rhinocladiella mackenziei Z518_09996 N 0.000
Z519_04351 Cladophialophora bantiana Z519_04351 N 0.000
Z519_10044 Cladophialophora bantiana Z519_10044 N 0.000