DREB1E (Arabidopsis thaliana)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 AT1G63030 T000430_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB1E
M00963_2.00		 Arabidopsis thaliana
NRYCGACAT
ATGTCGRYN		 PBM
LehtiShiu et al.(2015)
DDF2_Arabidopsis_thaliana		 (Direct) (Direct)
DREB1E
M06589_2.00		 Arabidopsis thaliana
NNNYYGYCGACATVD
HBATGTCGRCRRNNN		 Dap-seq
OMalley et al.(2016)
DDF2_col_a		 (Direct) (Direct)
DREB1E
M09702_2.00		 Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1E_03		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ddf2
M00965_2.00 		Arabidopsis lyrata
NRYCGACAT
ATGTCGRYN		 PBM
LehtiShiu et al.(2015)
DDF2_Arabidopsis_lyrata 		0.775 0.961
DREB1F
M00962_2.00 		Arabidopsis thaliana
NRCCGACNN
NNGTCGGYN		 PBM
LehtiShiu et al.(2015)
DDF1_Arabidopsis_thaliana 		0.735 0.824
DREB1F
M00840_2.00 		Arabidopsis thaliana
NRYCGACNN
NNGTCGRYN		 PBM
Franco-Zorrilla et al.(2014)
DDF1 		0.735 0.824
DDF1
M00964_2.00 		Arabidopsis lyrata
NRYCGACDY
RHGTCGRYN		 PBM
LehtiShiu et al.(2015)
DDF1_Arabidopsis_lyrata 		0.735 0.824
DREB1F
M06564_2.00 		Arabidopsis thaliana
NHNHYGYCGACATNN
NNATGTCGRCRDNDN		 Dap-seq
OMalley et al.(2016)
DDF1_col_a 		0.735 0.824
DREB1F
M06565_2.00 		Arabidopsis thaliana
HNDNNRYCGACAH
DTGTCGRYNNHND		 Dap-seq
OMalley et al.(2016)
DDF1_colamp_a 		0.735 0.824
DREB1F
M09701_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1F_03 		0.735 0.824
For this family, TFs with SR scores > 0.677 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00963_2.00 AP2 28 79

DNA Binding Domains

Protein ID Domain From To Sequence
AT1G63030.1 AP2 28 79
AT1G63030.2 AP2 28 79

Links

Other AP2 family TFs
Other Arabidopsis thaliana TFs

29 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ddf2 Arabidopsis lyrata fgenesh2_kg.2__175__AT1G63030.1 D 0.775
Bostr.22157s0019 Boechera stricta Bostr.22157s0019 I 0.775
Thhalv10023865m.g Eutrema salsugineum Thhalv10023865m.g I 0.775
Carubv10021910m.g Capsella rubella Carubv10021910m.g I 0.756
Cagra.23885s0001 Capsella grandiflora Cagra.23885s0001 I 0.756
Bo5g016750 Brassica oleracea Bo5g016750 I 0.745
Solyc08g007830.1 Solanum lycopersicum Solyc08g007830.1 I 0.738
DREB1F Arabidopsis thaliana AT1G12610 D 0.735
DDF1 Arabidopsis lyrata fgenesh2_kg.1__1363__AT1G12610.1 D 0.735
Bra027612 Brassica rapa Bra027612 I 0.731
Cagra.0568s0171 Capsella grandiflora Cagra.0568s0171 I 0.728
Carubv10010303m.g Capsella rubella Carubv10010303m.g I 0.728
Bo01335s010 Brassica oleracea Bo01335s010 I 0.723
Bra016763 Brassica rapa Bra016763 I 0.723
Bostr.13671s0200 Boechera stricta Bostr.13671s0200 I 0.716
Thhalv10009978m.g Eutrema salsugineum Thhalv10009978m.g I 0.715
Bra026963 Brassica rapa Bra026963 I 0.710
Bo8g108050 Brassica oleracea Bo8g108050 I 0.710
PGSC0003DMG400012526 Solanum tuberosum PGSC0003DMG400012526 I 0.704
GLYMA10G38440 Glycine max GLYMA10G38440 I 0.698
orange1.1g028094m.g Citrus sinensis orange1.1g028094m.g I 0.691
Ciclev10007068m.g Citrus clementina Ciclev10007068m.g I 0.691
GLYMA20G29410 Glycine max GLYMA20G29410 I 0.691
Solyc12g056430.1 Solanum lycopersicum Solyc12g056430.1 I 0.684
30190.m011119 Ricinus communis 30190.m011119 I 0.682
cassava41192.m1 Manihot esculenta cassava41192.m1 I 0.682
Bra019777 Brassica rapa Bra019777 I 0.678
GSMUA_Achr11G21630_001 Musa acuminata GSMUA_Achr11G21630_001 I 0.678