AT1G63040 (Arabidopsis thaliana)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 AT1G63040 T000431_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
a pseudogene member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The translated product contains one AP2 domain. There are 17 members in this subfamily including TINY.

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT1G63040
M06590_2.00
Arabidopsis thaliana
TTGAAA

TTTCAA
Dap-seq
OMalley et al.(2016)
AT1G63040_col_a
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF027
M06566_2.00
Arabidopsis thaliana
NNNNNNHNNHNYYRCCGACAN

NTGTCGGYRRNDNNDNNNNNN
Dap-seq
OMalley et al.(2016)
AT1G12630_col_a
0.730 0.898
ERF027
M06567_2.00
Arabidopsis thaliana
NNYYRCCGACANHNNN

NNNDNTGTCGGYRRNN
Dap-seq
OMalley et al.(2016)
AT1G12630_colamp_a
0.730 0.898
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT1G63040.1 AP2 88 138

Links

Other AP2 family TFs
Other Arabidopsis thaliana TFs

50 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Carubv10022214m.g Capsella rubella Carubv10022214m.g I 0.758
Cagra.6357s0007 Capsella grandiflora Cagra.6357s0007 I 0.758
TCM_016176 Theobroma cacao TCM_016176 I 0.758
Cla011673 Citrullus lanatus Cla011673 I 0.753
Carubv10012147m.g Capsella rubella Carubv10012147m.g I 0.752
Thhalv10009659m.g Eutrema salsugineum Thhalv10009659m.g I 0.752
PGSC0003DMG400022759 Solanum tuberosum PGSC0003DMG400022759 I 0.751
Solyc08g080290.2 Solanum lycopersicum Solyc08g080290.2 I 0.751
Aquca_013_00433 Aquilegia coerulea Aquca_013_00433 I 0.748
Cagra.0568s0175 Capsella grandiflora Cagra.0568s0175 I 0.747
Cucsa.302760 Cucumis sativus Cucsa.302760 I 0.747
fgenesh1_pm.C_scaffold_1001063 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1001063 I 0.746
scaffold_101390.1 Arabidopsis lyrata scaffold_101390.1 I 0.746
Bostr.13671s0198 Boechera stricta Bostr.13671s0198 I 0.744
Al_scaffold_0002_210 Arabidopsis lyrata Al_scaffold_0002_210 I 0.741
Al_scaffold_0240_1 Arabidopsis lyrata Al_scaffold_0240_1 I 0.741
Bra027616 Brassica rapa Bra027616 I 0.741
Bra027615 Brassica rapa Bra027615 I 0.741
MDP0000189347 Malus domestica MDP0000189347 I 0.730
ERF027 Arabidopsis thaliana AT1G12630 D 0.730
30147.m014311 Ricinus communis 30147.m014311 I 0.729
Bo9g036590 Brassica oleracea Bo9g036590 I 0.729
Bo9g028820 Brassica oleracea Bo9g028820 I 0.725
Cla004491 Citrullus lanatus Cla004491 I 0.725
Gorai.003G162600 Gossypium raimondii Gorai.003G162600 I 0.722
Thhalv10023678m.g Eutrema salsugineum Thhalv10023678m.g I 0.719
Bra016761 Brassica rapa Bra016761 I 0.706
Bo8g064940 Brassica oleracea Bo8g064940 I 0.706
PGSC0003DMG400012527 Solanum tuberosum PGSC0003DMG400012527 I 0.703
GLYMA10G38420 Glycine max GLYMA10G38420 I 0.698
MDP0000262710 Malus domestica MDP0000262710 I 0.694
Pm023766 Prunus mume Pm023766 I 0.686
PRUPE_ppa026499mg Prunus persica PRUPE_ppa026499mg I 0.686
Pavir.Ab02683 Panicum virgatum Pavir.Ab02683 I 0.681
Sb04g031960 Sorghum bicolor Sb04g031960 I 0.681
GRMZM2G000520 Zea mays GRMZM2G000520 I 0.681
LPERR02G22600 Leersia perrieri LPERR02G22600 I 0.681
OMERI02G26970 Oryza meridionalis OMERI02G26970 I 0.681
OGLUM02G28310 Oryza glumaepatula OGLUM02G28310 I 0.681
ONIVA02G30630 Oryza nivara ONIVA02G30630 I 0.681
OPUNC02G25450 Oryza punctata OPUNC02G25450 I 0.681
BGIOSGA008802 Oryza indica BGIOSGA008802 I 0.681
Si018039m.g Setaria italica Si018039m.g I 0.681
OS02G0676800 Oryza sativa OS02G0676800 I 0.681
ORUFI02G29210 Oryza rufipogon ORUFI02G29210 I 0.681
OBART02G27750 Oryza barthii OBART02G27750 I 0.681
Ciclev10023840m.g Citrus clementina Ciclev10023840m.g I 0.680
Eucgr.D01924 Eucalyptus grandis Eucgr.D01924 I 0.680
VIT_16s0100g00400 Vitis vinifera VIT_16s0100g00400 I 0.679
mgf025854m Mimulus guttatus mgf025854m I 0.678