ERF118 (Arabidopsis thaliana)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 AT1G68550 T000433_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF118
M01047_2.00		 Arabidopsis thaliana
NCGCCGYNN
NNRCGGCGN		 PBM
Sullivan et al.(2014)
pTH7330		 (Direct) (Direct)
ERF118
M06591_2.00		 Arabidopsis thaliana
YHDYCKCCGCCGYHD
HDRCGGCGGMGRHDR		 Dap-seq
OMalley et al.(2016)
CRF10_col100_a		 (Direct) (Direct)
ERF118
M06592_2.00		 Arabidopsis thaliana
NGDATCHNDGATTCNNH
DNNGAATCHNDGATHCN		 Dap-seq
OMalley et al.(2016)
CRF10_colamp_a		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK24580.1
M01101_2.00 		Cannabis sativa
VGCCGGCM
KGCCGGCB		 PBM
Lambert et al.(2019)
pTH11280 		0.711 0.694
ERF119
M01093_2.00 		Arabidopsis thaliana
NNNGCCGNN
NNCGGCNNN		 PBM
Lambert et al.(2019)
pTH11551 		0.693 0.755
For this family, TFs with SR scores > 0.677 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01047_2.00 AP2 51 101

DNA Binding Domains

Protein ID Domain From To Sequence
AT1G68550.1 AP2 111 161
AT1G68550.2 AP2 111 161

Links

Other AP2 family TFs
Other Arabidopsis thaliana TFs

55 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCM_011811 Theobroma cacao TCM_011811 I 0.788
Gorai.008G183300 Gossypium raimondii Gorai.008G183300 I 0.788
fgenesh2_kg.2__1107__AT1G68550.2 Arabidopsis lyrata fgenesh2_kg.2__1107__AT1G68550.2 I 0.763
Bostr.26959s0035 Boechera stricta Bostr.26959s0035 I 0.754
GLYMA10G42130 Glycine max GLYMA10G42130 I 0.734
SapurV1A.0078s0470 Salix purpurea SapurV1A.0078s0470 I 0.728
POPTR_0010s13540 Populus trichocarpa POPTR_0010s13540 I 0.728
VIT_01s0011g03470 Vitis vinifera VIT_01s0011g03470 I 0.727
LjSGA_016572.1 Lotus japonicus LjSGA_016572.1 I 0.715
LjSGA_132504.1 Lotus japonicus LjSGA_132504.1 I 0.715
chr6.LjT13N05.60.nc Lotus japonicus chr6.LjT13N05.60.nc I 0.715
Bra036360 Brassica rapa Bra036360 I 0.714
scaffold_500470.1 Arabidopsis lyrata scaffold_500470.1 I 0.713
Carubv10017565m.g Capsella rubella Carubv10017565m.g I 0.713
Cagra.6197s0021 Capsella grandiflora Cagra.6197s0021 I 0.713
SapurV1A.0079s0190 Salix purpurea SapurV1A.0079s0190 I 0.712
POPTR_0008s11900 Populus trichocarpa POPTR_0008s11900 I 0.712
Eucgr.G02326 Eucalyptus grandis Eucgr.G02326 I 0.712
PK24580.1 Cannabis sativa PK24580.1 D 0.711
evm.TU.supercontig_1.178 Carica papaya evm.TU.supercontig_1.178 I 0.711
cassava43300.valid.m1 Manihot esculenta cassava43300.valid.m1 I 0.710
Cucsa.365320 Cucumis sativus Cucsa.365320 I 0.710
cassava35757.valid.m1 Manihot esculenta cassava35757.valid.m1 I 0.710
cassava35758.valid.m1 Manihot esculenta cassava35758.valid.m1 I 0.710
Cla008128 Citrullus lanatus Cla008128 I 0.710
27524.m000298 Ricinus communis 27524.m000298 I 0.710
PGSC0003DMG400015880 Solanum tuberosum PGSC0003DMG400015880 I 0.706
Solyc04g007180.1 Solanum lycopersicum Solyc04g007180.1 I 0.706
Bo7g082250 Brassica oleracea Bo7g082250 I 0.703
Bra025170 Brassica rapa Bra025170 I 0.703
Thhalv10004526m.g Eutrema salsugineum Thhalv10004526m.g I 0.703
Carubv10021988m.g Capsella rubella Carubv10021988m.g I 0.702
Cagra.3364s0010 Capsella grandiflora Cagra.3364s0010 I 0.702
Bostr.0556s0264 Boechera stricta Bostr.0556s0264 I 0.702
Thhalv10019722m.g Eutrema salsugineum Thhalv10019722m.g I 0.697
Bo2g138790 Brassica oleracea Bo2g138790 I 0.696
GLYMA08G30716 Glycine max GLYMA08G30716 I 0.694
GLYMA20G24920 Glycine max GLYMA20G24920 I 0.694
GLYMA01G20383 Glycine max GLYMA01G20383 I 0.693
ERF119 Arabidopsis thaliana AT3G25890 D 0.693
GLYMA08G15830 Glycine max GLYMA08G15830 I 0.691
mgf006610m Mimulus guttatus mgf006610m I 0.691
Lus10021678.g Linum usitatissimum Lus10021678.g I 0.689
Bostr.13158s0163 Boechera stricta Bostr.13158s0163 I 0.688
GSMUA_Achr5G26850_001 Musa acuminata GSMUA_Achr5G26850_001 I 0.687
chr2.CM0903.260.nd Lotus japonicus chr2.CM0903.260.nd I 0.687
Carubv10017705m.g Capsella rubella Carubv10017705m.g I 0.686
Cagra.0483s0087 Capsella grandiflora Cagra.0483s0087 I 0.686
MDP0000119956 Malus domestica MDP0000119956 I 0.683
MDP0000743350 Malus domestica MDP0000743350 I 0.683
Cucsa.256230 Cucumis sativus Cucsa.256230 I 0.681
Cla021763 Citrullus lanatus Cla021763 I 0.680
Ca_05485 Cicer arietinum Ca_05485 I 0.679
Lus10034316.g Linum usitatissimum Lus10034316.g I 0.679