ERF118 (Arabidopsis thaliana)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 AT1G68550 T000433_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF118
M01047_2.00
Arabidopsis thaliana
NCGCCGYNN

NNRCGGCGN
PBM
Sullivan et al.(2014)
pTH7330
(Direct) (Direct)
ERF118
M06591_2.00
Arabidopsis thaliana
YHDYCKCCGCCGYHD

HDRCGGCGGMGRHDR
Dap-seq
OMalley et al.(2016)
CRF10_col100_a
(Direct) (Direct)
ERF118
M06592_2.00
Arabidopsis thaliana
NGDATCHNDGATTCNNH

DNNGAATCHNDGATHCN
Dap-seq
OMalley et al.(2016)
CRF10_colamp_a
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK24580.1
M01101_2.00
Cannabis sativa
VGCCGGCM

KGCCGGCB
PBM
Lambert et al.(2019)
pTH11280
0.711 0.694
ERF119
M01093_2.00
Arabidopsis thaliana
NNNGCCGNN

NNCGGCNNN
PBM
Lambert et al.(2019)
pTH11551
0.693 0.755
For this family, TFs with SR scores > 0.677 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01047_2.00 AP2 51 101

DNA Binding Domains

Protein ID Domain From To Sequence
AT1G68550.1 AP2 111 161
AT1G68550.2 AP2 111 161

Links

Other AP2 family TFs
Other Arabidopsis thaliana TFs

Invalid Input OrderBy

55 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action