ERF013 (Arabidopsis thaliana)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 AT1G77640 T000443_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF013
M06601_2.00		 Arabidopsis thaliana
DYCACCGHCAHHDNHNNNNNN
NNNNNNDNHDDTGDCGGTGRH		 Dap-seq
OMalley et al.(2016)
At1g77640_col_a		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF014
M06581_2.00 		Arabidopsis thaliana
YCDYCDCCACCGHCD
HGDCGGTGGHGRHGR		 Dap-seq
OMalley et al.(2016)
AT1G44830_col_a 		0.763 0.960
ERF012
M06570_2.00 		Arabidopsis thaliana
NHNNHNHHDHHDCCACCGHC
GDCGGTGGHDDHDDNDNNDN		 Dap-seq
OMalley et al.(2016)
DREB26_col_a 		0.763 0.960
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT1G77640.1 AP2 41 92

Links

Other AP2 family TFs
Other Arabidopsis thaliana TFs

115 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bostr.20129s0200 Boechera stricta Bostr.20129s0200 I 0.808
fgenesh2_kg.2__2058__AT1G77640.1 Arabidopsis lyrata fgenesh2_kg.2__2058__AT1G77640.1 I 0.808
MDP0000319736 Malus domestica MDP0000319736 I 0.800
Cagra.0096s0069 Capsella grandiflora Cagra.0096s0069 I 0.797
Carubv10020777m.g Capsella rubella Carubv10020777m.g I 0.797
Bo6g121400 Brassica oleracea Bo6g121400 I 0.771
Bra015660 Brassica rapa Bra015660 I 0.771
Thhalv10019045m.g Eutrema salsugineum Thhalv10019045m.g I 0.771
PGSC0003DMG400000910 Solanum tuberosum PGSC0003DMG400000910 I 0.770
Solyc11g012980.1 Solanum lycopersicum Solyc11g012980.1 I 0.770
ERF012 Arabidopsis thaliana AT1G21910 D 0.763
evm.TU.supercontig_36.41 Carica papaya evm.TU.supercontig_36.41 I 0.763
TCM_035077 Theobroma cacao TCM_035077 I 0.763
Carubv10010179m.g Capsella rubella Carubv10010179m.g I 0.763
gene11145-v1.0-hybrid Fragaria vesca gene11145-v1.0-hybrid I 0.763
PRUPE_ppa010649mg Prunus persica PRUPE_ppa010649mg I 0.763
Gorai.010G048900 Gossypium raimondii Gorai.010G048900 I 0.763
Lus10003740.g Linum usitatissimum Lus10003740.g I 0.763
Gorai.009G244500 Gossypium raimondii Gorai.009G244500 I 0.763
POPTR_0002s08610 Populus trichocarpa POPTR_0002s08610 I 0.763
Lus10028032.g Linum usitatissimum Lus10028032.g I 0.763
Gorai.002G220900 Gossypium raimondii Gorai.002G220900 I 0.763
Ca_25824 Cicer arietinum Ca_25824 I 0.763
mgf021045m Mimulus guttatus mgf021045m I 0.763
Cucsa.372760 Cucumis sativus Cucsa.372760 I 0.763
Bostr.12302s0095 Boechera stricta Bostr.12302s0095 I 0.763
Bostr.12659s0041 Boechera stricta Bostr.12659s0041 I 0.763
Cagra.2306s0038 Capsella grandiflora Cagra.2306s0038 I 0.763
Cagra.1192s0001 Capsella grandiflora Cagra.1192s0001 I 0.763
Cucsa.365220 Cucumis sativus Cucsa.365220 I 0.763
cassava28944.valid.m1 Manihot esculenta cassava28944.valid.m1 I 0.763
MTR_5g058470 Medicago truncatula MTR_5g058470 I 0.763
VIT_18s0001g03240 Vitis vinifera VIT_18s0001g03240 I 0.763
Cla014165 Citrullus lanatus Cla014165 I 0.763
Cla023512 Citrullus lanatus Cla023512 I 0.763
29908.m006165 Ricinus communis 29908.m006165 I 0.763
Pm004870 Prunus mume Pm004870 I 0.763
Carubv10010259m.g Capsella rubella Carubv10010259m.g I 0.763
MDP0000120147 Malus domestica MDP0000120147 I 0.763
GLYMA04G43040 Glycine max GLYMA04G43040 I 0.763
fgenesh2_kg.1__3777__AT1G44830.1 Arabidopsis lyrata fgenesh2_kg.1__3777__AT1G44830.1 I 0.763
MTR_3g072610 Medicago truncatula MTR_3g072610 I 0.763
GLYMA13G02860 Glycine max GLYMA13G02860 I 0.763
GLYMA14G22970 Glycine max GLYMA14G22970 I 0.763
DREB26 Arabidopsis lyrata fgenesh2_kg.1__2381__AT1G21910.1 I 0.763
Thhalv10008639m.g Eutrema salsugineum Thhalv10008639m.g I 0.763
Bo6g004620 Brassica oleracea Bo6g004620 I 0.763
ERF014 Arabidopsis thaliana AT1G44830 D 0.763
Thhalv10011778m.g Eutrema salsugineum Thhalv10011778m.g I 0.763
Bra036022 Brassica rapa Bra036022 I 0.763
Bra040309 Brassica rapa Bra040309 I 0.763
SapurV1A.0010s0960 Salix purpurea SapurV1A.0010s0960 I 0.763
GLYMA06G11700 Glycine max GLYMA06G11700 I 0.763
MDP0000923690 Malus domestica MDP0000923690 I 0.763
Aquca_014_00181 Aquilegia coerulea Aquca_014_00181 I 0.762
Bo5g034880 Brassica oleracea Bo5g034880 I 0.761
Ciclev10002294m.g Citrus clementina Ciclev10002294m.g I 0.756
orange1.1g039680m.g Citrus sinensis orange1.1g039680m.g I 0.756
Bra016400 Brassica rapa Bra016400 I 0.753
cassava44357.m1 Manihot esculenta cassava44357.m1 I 0.753
Bo8g071150 Brassica oleracea Bo8g071150 I 0.753
GSMUA_Achr8G23240_001 Musa acuminata GSMUA_Achr8G23240_001 I 0.751
SapurV1A.3198s0010 Salix purpurea SapurV1A.3198s0010 I 0.750
SapurV1A.0105s0160 Salix purpurea SapurV1A.0105s0160 I 0.750
OGLUM02G34320 Oryza glumaepatula OGLUM02G34320 I 0.749
LPERR06G06370 Leersia perrieri LPERR06G06370 I 0.749
BGIOSGA005542 Oryza indica BGIOSGA005542 I 0.749
OMERI02G32260 Oryza meridionalis OMERI02G32260 I 0.749
ONIVA02G33600 Oryza nivara ONIVA02G33600 I 0.749
BRADI3G57867 Brachypodium distachyon BRADI3G57867 I 0.749
Pavir.J02555 Panicum virgatum Pavir.J02555 I 0.749
GRMZM2G011110 Zea mays GRMZM2G011110 I 0.749
Sb04g034290 Sorghum bicolor Sb04g034290 I 0.749
POPTR_0005s15830 Populus trichocarpa POPTR_0005s15830 I 0.749
OS02G0767800 Oryza sativa OS02G0767800 I 0.749
OPUNC02G31280 Oryza punctata OPUNC02G31280 I 0.749
F775_17148 Aegilops tauschii F775_17148 I 0.749
mgf023290m Mimulus guttatus mgf023290m I 0.747
Bra012298 Brassica rapa Bra012298 I 0.744
LPERR02G27720 Leersia perrieri LPERR02G27720 I 0.743
BRADI1G46120 Brachypodium distachyon BRADI1G46120 I 0.742
Pavir.J23882 Panicum virgatum Pavir.J23882 I 0.741
Pavir.J26231 Panicum virgatum Pavir.J26231 I 0.741
Si007977m.g Setaria italica Si007977m.g I 0.741
GSMUA_Achr10G30100_001 Musa acuminata GSMUA_Achr10G30100_001 I 0.741
F775_20580 Aegilops tauschii F775_20580 I 0.741
GSMUA_Achr10G25270_001 Musa acuminata GSMUA_Achr10G25270_001 I 0.740
MLOC_70931 Hordeum vulgare MLOC_70931 I 0.739
Sb10g006980 Sorghum bicolor Sb10g006980 I 0.734
PK16069.1 Cannabis sativa PK16069.1 I 0.727
LjT35E05.90.nd Lotus japonicus LjT35E05.90.nd I 0.725
chr1.LjB21G05.120.nc Lotus japonicus chr1.LjB21G05.120.nc I 0.725
GRMZM2G015281 Zea mays GRMZM2G015281 I 0.721
Pavir.Ib01111 Panicum virgatum Pavir.Ib01111 I 0.721
Pavir.Ia03856 Panicum virgatum Pavir.Ia03856 I 0.721
Si039170m.g Setaria italica Si039170m.g I 0.721
Sb01g040280 Sorghum bicolor Sb01g040280 I 0.721
GRMZM2G007406 Zea mays GRMZM2G007406 I 0.713
Bo7g059990 Brassica oleracea Bo7g059990 I 0.710
Eucgr.F03772 Eucalyptus grandis Eucgr.F03772 I 0.706
GRMZM2G084264 Zea mays GRMZM2G084264 I 0.702
GRMZM2G021369 Zea mays GRMZM2G021369 I 0.699
LjSGA_147935.1 Lotus japonicus LjSGA_147935.1 I 0.693
ONIVA06G08290 Oryza nivara ONIVA06G08290 I 0.692
OMERI06G08130 Oryza meridionalis OMERI06G08130 I 0.692
OBART06G07000 Oryza barthii OBART06G07000 I 0.692
OPUNC06G06600 Oryza punctata OPUNC06G06600 I 0.692
BGIOSGA022531 Oryza indica BGIOSGA022531 I 0.692
OGLUM06G07380 Oryza glumaepatula OGLUM06G07380 I 0.692
ORGLA06G0065100 Oryza glaberrima ORGLA06G0065100 I 0.692
Pavir.J30447 Panicum virgatum Pavir.J30447 I 0.690
Traes_4BL_762F09E09 Triticum aestivum Traes_4BL_762F09E09 I 0.677
Traes_4DL_FB8B5AAEB Triticum aestivum Traes_4DL_FB8B5AAEB I 0.677
Traes_4AS_18663793B Triticum aestivum Traes_4AS_18663793B I 0.677
BRADI1G67350 Brachypodium distachyon BRADI1G67350 I 0.677