ERF084 (Arabidopsis thaliana)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 AT1G80580 T000446_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
a member of the Arabidopsis SWI3 gene family. Protein physically interacts with ATSWI3B and ATSWI3A, the other two members of the SWI3 family. Homologous to yeast SWI3 & RSC8, components of the SWI/SNF and RSC chromatin remodeling complexes. Referred to as CHB3 in Zhou et al (2003).

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
AT1G80580.1 AP2 114 165

Links

Other AP2 family TFs
Other Arabidopsis thaliana TFs

62 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
fgenesh1_pm.C_scaffold_2001935 Arabidopsis lyrata fgenesh1_pm.C_scaffold_2001935 N 0.879
Bostr.20129s0456 Boechera stricta Bostr.20129s0456 N 0.879
Carubv10022119m.g Capsella rubella Carubv10022119m.g N 0.879
Cagra.1725s0082 Capsella grandiflora Cagra.1725s0082 N 0.879
Thhalv10019474m.g Eutrema salsugineum Thhalv10019474m.g N 0.843
Thhalv10000556m.g Eutrema salsugineum Thhalv10000556m.g N 0.843
mgf023662m Mimulus guttatus mgf023662m I 0.837
Cla015583 Citrullus lanatus Cla015583 I 0.837
Ca_20041 Cicer arietinum Ca_20041 I 0.837
Cucsa.105790 Cucumis sativus Cucsa.105790 I 0.837
Ciclev10027171m.g Citrus clementina Ciclev10027171m.g I 0.837
Bra008460 Brassica rapa Bra008460 N 0.837
orange1.1g047950m.g Citrus sinensis orange1.1g047950m.g I 0.837
evm.TU.supercontig_10.125 Carica papaya evm.TU.supercontig_10.125 I 0.837
VIT_09s0002g08830 Vitis vinifera VIT_09s0002g08830 I 0.837
MTR_4g009260 Medicago truncatula MTR_4g009260 I 0.837
MDP0000264187 Malus domestica MDP0000264187 I 0.836
Pm013734 Prunus mume Pm013734 I 0.836
GLYMA08G23074 Glycine max GLYMA08G23074 I 0.836
TCM_027348 Theobroma cacao TCM_027348 I 0.831
SapurV1A.1000s0130 Salix purpurea SapurV1A.1000s0130 I 0.830
SapurV1A.0058s0710 Salix purpurea SapurV1A.0058s0710 I 0.830
cassava38416.m1 Manihot esculenta cassava38416.m1 I 0.830
GLYMA07G03041 Glycine max GLYMA07G03041 I 0.830
27446.m000475 Ricinus communis 27446.m000475 I 0.830
POPTR_0001s32050 Populus trichocarpa POPTR_0001s32050 I 0.830
PRUPE_ppa020928mg Prunus persica PRUPE_ppa020928mg I 0.830
Gorai.006G107500 Gossypium raimondii Gorai.006G107500 I 0.829
gene15953-v1.0-hybrid Fragaria vesca gene15953-v1.0-hybrid I 0.828
AMTR_s00026p00180130 Amborella trichopoda AMTR_s00026p00180130 I 0.824
POPTR_0017s08090 Populus trichocarpa POPTR_0017s08090 I 0.823
Gorai.009G125700 Gossypium raimondii Gorai.009G125700 N 0.817
Solyc03g117230.1 Solanum lycopersicum Solyc03g117230.1 N 0.817
Eucgr.F03941 Eucalyptus grandis Eucgr.F03941 N 0.816
Bo2g095830 Brassica oleracea Bo2g095830 N 0.796
SELMODRAFT_417258 Selaginella moellendorffii SELMODRAFT_417258 N 0.795
SELMODRAFT_412693 Selaginella moellendorffii SELMODRAFT_412693 N 0.795
SELMODRAFT_428599 Selaginella moellendorffii SELMODRAFT_428599 N 0.786
SELMODRAFT_428344 Selaginella moellendorffii SELMODRAFT_428344 N 0.786
fgenesh1_pg.scaffold_23000002 Physcomitrella patens fgenesh1_pg.scaffold_23000002 I 0.786
gw1.204.54.1 Physcomitrella patens gw1.204.54.1 N 0.783
PGSC0003DMG400010135 Solanum tuberosum PGSC0003DMG400010135 N 0.781
Lus10014345.g Linum usitatissimum Lus10014345.g N 0.776
e_gw1.14.213.1 Physcomitrella patens e_gw1.14.213.1 N 0.768
Lus10026053.g Linum usitatissimum Lus10026053.g N 0.768
e_gw1.145.79.1 Physcomitrella patens e_gw1.145.79.1 N 0.753
e_gw1.15.234.1 Physcomitrella patens e_gw1.15.234.1 N 0.749
e_gw1.276.69.1 Physcomitrella patens e_gw1.276.69.1 N 0.742
gw1.340.39.1 Physcomitrella patens gw1.340.39.1 N 0.738
GSMUA_Achr1G25890_001 Musa acuminata GSMUA_Achr1G25890_001 I 0.705
POPTR_0013s15440 Populus trichocarpa POPTR_0013s15440 I 0.704
BRADI3G18070 Brachypodium distachyon BRADI3G18070 I 0.697
ORUFI05G12300 Oryza rufipogon ORUFI05G12300 N 0.687
ONIVA05G11840 Oryza nivara ONIVA05G11840 N 0.687
OMERI05G10040 Oryza meridionalis OMERI05G10040 N 0.687
OS05G0316800 Oryza sativa OS05G0316800 N 0.687
BGIOSGA019608 Oryza indica BGIOSGA019608 N 0.687
Solyc01g095500.2 Solanum lycopersicum Solyc01g095500.2 I 0.685
Pavir.Fb01486 Panicum virgatum Pavir.Fb01486 I 0.681
Pavir.Fa01730 Panicum virgatum Pavir.Fa01730 I 0.681
Pavir.Fb00952 Panicum virgatum Pavir.Fb00952 I 0.681
PGSC0003DMG400000091 Solanum tuberosum PGSC0003DMG400000091 I 0.680