DREB2C (Arabidopsis thaliana)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 AT2G40340 T000459_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought.

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
DREB2C
M00846_2.00
Arabidopsis thaliana
NNRCCGNNN

NNNCGGYNN
PBM
Franco-Zorrilla et al.(2014)
DREB2C
(Direct) (Direct)
DREB2C
M01049_2.00
Arabidopsis thaliana
VRCCGVCW

WGBCGGYB
PBM
Sullivan et al.(2014)
pTH9747
(Direct) (Direct)
DREB2C
M06611_2.00
Arabidopsis thaliana
DCCDCCRCCDHYDCCRCCDCM

KGHGGYGGHRDHGGYGGHGGH
Dap-seq
OMalley et al.(2016)
ERF48_col_a
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
For this family, TFs with SR scores > 0.677 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00846_2.00 AP2 70 121
M01049_2.00 AP2 51 102

DNA Binding Domains

Protein ID Domain From To Sequence
AT2G40340.1 AP2 70 121
AT2G40340.2 AP2 12 63
AT2G40340.3 AP2 70 121
AT2G40340.4 AP2 12 63
AT2G40340.5 AP2 12 63
AT2G40340.6 AP2 77 128

Links

Other AP2 family TFs
Other Arabidopsis thaliana TFs

5 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
DREB2C Arabidopsis lyrata scaffold_402826.1 I 0.726
evm.TU.supercontig_5.232 Carica papaya evm.TU.supercontig_5.232 I 0.711
AT2G40350 Arabidopsis thaliana AT2G40350 I 0.703
Thhalv10016913m.g Eutrema salsugineum Thhalv10016913m.g I 0.684