ERF016 (Arabidopsis thaliana)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 AT5G21960 T000516_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Basic leucine zipper (bZIP) transcription factor. Nuclear localization. Involved in light-regulated transcriptional activation of G-box-containing promoters. Negatively regulated by Cop1. Although cytokinins do not appear to affect the gene's promoter activity, they appear to stabilize the protein. HY5 plays a role in anthocyanin accumulation in far-red light and blue light, but not in red light or in the dark. Mutant studies showed that the gene product is involved in the positive regulation of the PHYA-mediated inhibition of hypocotyl elongation. Binds to G- and Z-boxes, and other ACEs, but not to E-box. Loss of function mutation shows ABA resistant seedling phenotypes suggesting involvement for HY5 in mediating ABA responses. Binds to the promoter of ABI5 and regulates its expression.

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF017
M06568_2.00 		Arabidopsis thaliana
NHNYCRCCGWCMWH
DWKGWCGGYGRNDN		 Dap-seq
OMalley et al.(2016)
At1g19210_col_a 		0.752 0.860
ERF017
M06569_2.00 		Arabidopsis thaliana
NNNHNNCRCCGWCMW
WKGWCGGYGNNDNNN		 Dap-seq
OMalley et al.(2016)
At1g19210_colamp_a 		0.752 0.860
ERF018
M00842_2.00 		Arabidopsis thaliana
HRCCGDCMN
NKGHCGGYD		 PBM
Franco-Zorrilla et al.(2014)
ORA47 		0.733 0.800
ERF018
M01610_2.00 		Arabidopsis thaliana
NRCCGNCHN
NDGNCGGYN		 PBM
Weirauch et al.(2014)
pTH7215 		0.733 0.800
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT5G21960.1 AP2 5 56

Links

Other AP2 family TFs
Other Arabidopsis thaliana TFs

128 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Thhalv10015465m.g Eutrema salsugineum Thhalv10015465m.g I 0.825
Bo9g149820 Brassica oleracea Bo9g149820 I 0.821
scaffold_602234.1 Arabidopsis lyrata scaffold_602234.1 I 0.821
Bra002377 Brassica rapa Bra002377 I 0.821
Bostr.26527s0082 Boechera stricta Bostr.26527s0082 I 0.821
Carubv10001903m.g Capsella rubella Carubv10001903m.g I 0.821
Bo3g015600 Brassica oleracea Bo3g015600 I 0.812
Bra006599 Brassica rapa Bra006599 I 0.812
Bra020162 Brassica rapa Bra020162 I 0.810
Bo2g023630 Brassica oleracea Bo2g023630 I 0.801
29739.m003647 Ricinus communis 29739.m003647 I 0.791
Cla022291 Citrullus lanatus Cla022291 I 0.774
Cucsa.055920 Cucumis sativus Cucsa.055920 I 0.774
Lus10009798.g Linum usitatissimum Lus10009798.g I 0.772
Lus10038082.g Linum usitatissimum Lus10038082.g I 0.772
Lus10034885.g Linum usitatissimum Lus10034885.g I 0.767
Lus10033420.g Linum usitatissimum Lus10033420.g I 0.767
Bo8g068370 Brassica oleracea Bo8g068370 I 0.764
Bra016518 Brassica rapa Bra016518 I 0.764
TCM_037415 Theobroma cacao TCM_037415 I 0.763
evm.TU.supercontig_266.5 Carica papaya evm.TU.supercontig_266.5 I 0.761
Gorai.004G285900 Gossypium raimondii Gorai.004G285900 I 0.760
cassava10604.m1 Manihot esculenta cassava10604.m1 I 0.757
Gorai.001G019100 Gossypium raimondii Gorai.001G019100 I 0.757
POPTR_0006s23480 Populus trichocarpa POPTR_0006s23480 I 0.756
SapurV1A.2229s0010 Salix purpurea SapurV1A.2229s0010 I 0.756
SapurV1A.0373s0040 Salix purpurea SapurV1A.0373s0040 I 0.756
mgf021940m Mimulus guttatus mgf021940m I 0.755
SapurV1A.0057s0300 Salix purpurea SapurV1A.0057s0300 I 0.754
Carubv10011394m.g Capsella rubella Carubv10011394m.g I 0.752
Cagra.1961s0079 Capsella grandiflora Cagra.1961s0079 I 0.752
gene12919-v1.0-hybrid Fragaria vesca gene12919-v1.0-hybrid I 0.752
fgenesh2_kg.1__2098__AT1G19210.1 Arabidopsis lyrata fgenesh2_kg.1__2098__AT1G19210.1 I 0.752
ERF017 Arabidopsis thaliana AT1G19210 D 0.752
cassava25057.valid.m1 Manihot esculenta cassava25057.valid.m1 I 0.750
POPTR_0006s14100 Populus trichocarpa POPTR_0006s14100 I 0.750
Pm027117 Prunus mume Pm027117 I 0.749
29739.m003716 Ricinus communis 29739.m003716 I 0.749
PRUPE_ppa011336mg Prunus persica PRUPE_ppa011336mg I 0.749
cassava20547.m1 Manihot esculenta cassava20547.m1 I 0.748
Cla007584 Citrullus lanatus Cla007584 I 0.746
POPTR_0006s14090 Populus trichocarpa POPTR_0006s14090 I 0.744
Aquca_076_00039 Aquilegia coerulea Aquca_076_00039 I 0.744
Eucgr.C00780 Eucalyptus grandis Eucgr.C00780 I 0.744
MTR_1g014820 Medicago truncatula MTR_1g014820 I 0.743
MTR_1g014860 Medicago truncatula MTR_1g014860 I 0.743
MTR_1g014800 Medicago truncatula MTR_1g014800 I 0.743
Ca_01683 Cicer arietinum Ca_01683 I 0.743
VIT_11s0016g00660 Vitis vinifera VIT_11s0016g00660 I 0.742
SapurV1A.0521s0050 Salix purpurea SapurV1A.0521s0050 I 0.742
Bra015882 Brassica rapa Bra015882 I 0.742
Eucgr.C03297 Eucalyptus grandis Eucgr.C03297 I 0.742
Gorai.010G091100 Gossypium raimondii Gorai.010G091100 I 0.741
GLYMA06G06101 Glycine max GLYMA06G06101 I 0.741
GLYMA04G06095 Glycine max GLYMA04G06095 I 0.741
Bo8g102870 Brassica oleracea Bo8g102870 I 0.740
POPTR_0018s08320 Populus trichocarpa POPTR_0018s08320 I 0.740
Bra031069 Brassica rapa Bra031069 I 0.740
mgf024162m Mimulus guttatus mgf024162m I 0.739
ORA47 Vitis vinifera VIT_04s0008g02230 I 0.739
Thhalv10009812m.g Eutrema salsugineum Thhalv10009812m.g I 0.739
MDP0000649022 Malus domestica MDP0000649022 I 0.738
Bra003780 Brassica rapa Bra003780 I 0.734
Bostr.3288s0141 Boechera stricta Bostr.3288s0141 I 0.733
mgf025452m Mimulus guttatus mgf025452m I 0.733
Bo6g086740 Brassica oleracea Bo6g086740 I 0.733
ERF018 Arabidopsis thaliana AT1G74930 D 0.733
ORA47 Arabidopsis lyrata fgenesh2_kg.2__1761__AT1G74930.1 I 0.733
Carubv10020965m.g Capsella rubella Carubv10020965m.g I 0.733
Cagra.0402s0035 Capsella grandiflora Cagra.0402s0035 I 0.733
Bo6g119120 Brassica oleracea Bo6g119120 I 0.733
Si019636m.g Setaria italica Si019636m.g I 0.731
Pavir.Aa00296 Panicum virgatum Pavir.Aa00296 I 0.731
chr5.CM0040.40.nd Lotus japonicus chr5.CM0040.40.nd I 0.730
Ciclev10010348m.g Citrus clementina Ciclev10010348m.g I 0.729
TCM_037486 Theobroma cacao TCM_037486 I 0.729
Thhalv10019652m.g Eutrema salsugineum Thhalv10019652m.g I 0.728
Bostr.7128s0526 Boechera stricta Bostr.7128s0526 I 0.728
GLYMA09G08330 Glycine max GLYMA09G08330 I 0.728
MDP0000704216 Malus domestica MDP0000704216 I 0.726
Cucsa.271180 Cucumis sativus Cucsa.271180 I 0.725
GLYMA15G19910 Glycine max GLYMA15G19910 I 0.724
AMTR_s00007p00268280 Amborella trichopoda AMTR_s00007p00268280 I 0.723
Pavir.J00593 Panicum virgatum Pavir.J00593 I 0.723
GLYMA17G33535 Glycine max GLYMA17G33535 I 0.721
MTR_2g043050 Medicago truncatula MTR_2g043050 I 0.721
Ciclev10009540m.g Citrus clementina Ciclev10009540m.g I 0.720
orange1.1g029068m.g Citrus sinensis orange1.1g029068m.g I 0.720
Cla011318 Citrullus lanatus Cla011318 I 0.719
Cucsa.141980 Cucumis sativus Cucsa.141980 I 0.719
Ca_09124 Cicer arietinum Ca_09124 I 0.717
Gorai.001G016800 Gossypium raimondii Gorai.001G016800 I 0.717
PGSC0003DMG400002899 Solanum tuberosum PGSC0003DMG400002899 I 0.715
GRMZM2G097081 Zea mays GRMZM2G097081 I 0.715
Solyc12g009240.1 Solanum lycopersicum Solyc12g009240.1 I 0.715
PGSC0003DMG400030781 Solanum tuberosum PGSC0003DMG400030781 I 0.714
Solyc06g054630.1 Solanum lycopersicum Solyc06g054630.1 I 0.714
GLYMA13G17250 Glycine max GLYMA13G17250 I 0.713
Aquca_076_00040 Aquilegia coerulea Aquca_076_00040 I 0.713
GLYMA14G12505 Glycine max GLYMA14G12505 I 0.712
Gorai.013G222700 Gossypium raimondii Gorai.013G222700 I 0.712
GLYMA17G05240 Glycine max GLYMA17G05240 I 0.711
Traes_6DL_FA861D610 Triticum aestivum Traes_6DL_FA861D610 I 0.709
MTR_3g105480 Medicago truncatula MTR_3g105480 I 0.709
Ca_19295 Cicer arietinum Ca_19295 I 0.709
MTR_3g105510 Medicago truncatula MTR_3g105510 I 0.709
chr1.CM0133.1010.nc Lotus japonicus chr1.CM0133.1010.nc I 0.708
MTR_2g043030 Medicago truncatula MTR_2g043030 I 0.707
MTR_2g043040 Medicago truncatula MTR_2g043040 I 0.707
Ca_19297 Cicer arietinum Ca_19297 I 0.706
LPERR02G28660 Leersia perrieri LPERR02G28660 I 0.705
Eucgr.C03175 Eucalyptus grandis Eucgr.C03175 I 0.704
Ca_19296 Cicer arietinum Ca_19296 I 0.704
Bra025719 Brassica rapa Bra025719 I 0.704
chr6.CM0420.30.nd Lotus japonicus chr6.CM0420.30.nd I 0.701
BGIOSGA005486 Oryza indica BGIOSGA005486 I 0.694
ORGLA02G0301600 Oryza glaberrima ORGLA02G0301600 I 0.694
OS02G0781300 Oryza sativa OS02G0781300 I 0.694
ONIVA02G36910 Oryza nivara ONIVA02G36910 I 0.694
OPUNC02G32160 Oryza punctata OPUNC02G32160 I 0.694
ORUFI02G36340 Oryza rufipogon ORUFI02G36340 I 0.694
OMERI01G37050 Oryza meridionalis OMERI01G37050 I 0.694
OGLUM02G35980 Oryza glumaepatula OGLUM02G35980 I 0.694
GSMUA_Achr5G05160_001 Musa acuminata GSMUA_Achr5G05160_001 I 0.688
AMTR_s00007p00268460 Amborella trichopoda AMTR_s00007p00268460 I 0.687
PK18548.1 Cannabis sativa PK18548.1 I 0.681
Si008104m.g Setaria italica Si008104m.g I 0.679
MTR_1g014780 Medicago truncatula MTR_1g014780 I 0.677