DREB1D (Arabidopsis thaliana)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 AT5G51990 T000526_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
DREB1D
M06678_2.00
Arabidopsis thaliana
NHBRCCGACRTNN

NNAYGTCGGYVDN
Dap-seq
OMalley et al.(2016)
CBF4_col_a
(Direct) (Direct)
DREB1D
M06679_2.00
Arabidopsis thaliana
HYRCCGACATND

HNATGTCGGYRD
Dap-seq
OMalley et al.(2016)
CBF4_colamp_a
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
DREB1C
M01623_2.00
Arabidopsis thaliana
RCCGACAT

ATGTCGGY
PBM
Weirauch et al.(2014)
pTH8187
0.800 0.920
DREB1C
M06639_2.00
Arabidopsis thaliana
NNNHBRCCGACATNN

NNATGTCGGYVDNNN
Dap-seq
OMalley et al.(2016)
CBF2_col_a
0.800 0.920
DREB1C
M06640_2.00
Arabidopsis thaliana
NYBRCCGACATVN

NBATGTCGGYVRN
Dap-seq
OMalley et al.(2016)
CBF2_colamp_a
0.800 0.920
DREB1A
M01624_2.00
Arabidopsis thaliana
NRCCGACNNN

NNNGTCGGYN
PBM
Weirauch et al.(2014)
pTH8163
0.778 0.940
DREB1A
M01625_2.00
Arabidopsis thaliana
NNRCCGACNW

WNGTCGGYNN
PBM
Weirauch et al.(2014)
pTH9718
0.778 0.940
DREB1A
M06641_2.00
Arabidopsis thaliana
HNYBRCCGACDWNN

NNWHGTCGGYVRND
Dap-seq
OMalley et al.(2016)
CBF3_col_a
0.778 0.940
DREB1A
M06642_2.00
Arabidopsis thaliana
YBRCCGACATN

NATGTCGGYVR
Dap-seq
OMalley et al.(2016)
CBF3_colamp_a
0.778 0.940
DREB1B
M06643_2.00
Arabidopsis thaliana
DHBRCCGACRHN

NDYGTCGGYVDH
Dap-seq
OMalley et al.(2016)
CBF1_col_a
0.715 0.940
DREB1B
M06644_2.00
Arabidopsis thaliana
NNNHBRCCGACAWNN

NNWTGTCGGYVDNNN
Dap-seq
OMalley et al.(2016)
CBF1_colamp_a
0.715 0.940
DREB1G
M01635_2.00
Oryza sativa
NYGCCGACAN

NTGTCGGCRN
PBM
Weirauch et al.(2014)
pTH8352
0.714 0.800
DREB1G
M09707_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREB1G_01
0.714 0.800
DREB1F
M00962_2.00
Arabidopsis thaliana
NRCCGACNN

NNGTCGGYN
PBM
LehtiShiu et al.(2015)
DDF1_Arabidopsis_thaliana
0.701 0.760
DREB1F
M00840_2.00
Arabidopsis thaliana
NRYCGACNN

NNGTCGRYN
PBM
Franco-Zorrilla et al.(2014)
DDF1
0.701 0.760
DDF1
M00964_2.00
Arabidopsis lyrata
NRYCGACDY

RHGTCGRYN
PBM
LehtiShiu et al.(2015)
DDF1_Arabidopsis_lyrata
0.701 0.760
DREB1F
M06564_2.00
Arabidopsis thaliana
NHNHYGYCGACATNN

NNATGTCGRCRDNDN
Dap-seq
OMalley et al.(2016)
DDF1_col_a
0.701 0.760
DREB1F
M06565_2.00
Arabidopsis thaliana
HNDNNRYCGACAH

DTGTCGRYNNHND
Dap-seq
OMalley et al.(2016)
DDF1_colamp_a
0.701 0.760
DREB1F
M09701_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREB1F_03
0.701 0.760
DREB1E
M09709_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREB1E_01
0.700 0.800
Q8S2T3_BRANA
M09745_2.00
Brassica napus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CBF16_01
0.699 0.880
Q6T3U0_BRANA
M09743_2.00
Brassica napus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREBII1_01
0.699 0.880
Q8S2T5_BRANA
M09746_2.00
Brassica napus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CBF5_01
0.693 0.900
ddf2
M00965_2.00
Arabidopsis lyrata
NRYCGACAT

ATGTCGRYN
PBM
LehtiShiu et al.(2015)
DDF2_Arabidopsis_lyrata
0.678 0.760
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT5G51990.1 AP2 52 103

Links

Other AP2 family TFs
Other Arabidopsis thaliana TFs

216 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Solyc07g007320.1 Solanum lycopersicum Solyc07g007320.1 N 0.000
30090.m000247 Ricinus communis 30090.m000247 N 0.000
cassava11490.m1 Manihot esculenta cassava11490.m1 N 0.000
cassava41034.m1 Manihot esculenta cassava41034.m1 N 0.000
cassava446.valid.m1 Manihot esculenta cassava446.valid.m1 N 0.000
Cucsa.048750 Cucumis sativus Cucsa.048750 N 0.000
Cucsa.132770 Cucumis sativus Cucsa.132770 N 0.000
Cucsa.134530 Cucumis sativus Cucsa.134530 N 0.000
Aquca_016_00081 Aquilegia coerulea Aquca_016_00081 N 0.000
Aquca_030_00325 Aquilegia coerulea Aquca_030_00325 N 0.000
Bostr.15697s0409 Boechera stricta Bostr.15697s0409 N 0.000
Carubv10011663m.g Capsella rubella Carubv10011663m.g N 0.000
Ciclev10016385m.g Citrus clementina Ciclev10016385m.g N 0.000
Eucgr.C00450 Eucalyptus grandis Eucgr.C00450 N 0.000
29417.m000034 Ricinus communis 29417.m000034 N 0.000
Pm027672 Prunus mume Pm027672 N 0.000
Pm010795 Prunus mume Pm010795 N 0.000
TCM_006017 Theobroma cacao TCM_006017 N 0.000
TCM_038233 Theobroma cacao TCM_038233 N 0.000
Traes_6BS_4DA724E79 Triticum aestivum Traes_6BS_4DA724E79 N 0.000
Traes_6DS_CA4C01DEF Triticum aestivum Traes_6DS_CA4C01DEF N 0.000
Traes_7AL_5E9E6A334 Triticum aestivum Traes_7AL_5E9E6A334 N 0.000
Traes_7DL_B446D4CC6 Triticum aestivum Traes_7DL_B446D4CC6 N 0.000
TRIUR3_32978 Triticum urartu TRIUR3_32978 N 0.000
TRIUR3_33737 Triticum urartu TRIUR3_33737 N 0.000
VIT_01s0011g01410 Vitis vinifera VIT_01s0011g01410 N 0.000
VIT_11s0118g00600 Vitis vinifera VIT_11s0118g00600 N 0.000
Ca_06740 Cicer arietinum Ca_06740 N 0.000
Cla010042 Citrullus lanatus Cla010042 N 0.000
Cla019628 Citrullus lanatus Cla019628 N 0.000
Eucgr.D00032 Eucalyptus grandis Eucgr.D00032 N 0.000
Eucgr.E00457 Eucalyptus grandis Eucgr.E00457 N 0.000
Pavir.Db00476 Panicum virgatum Pavir.Db00476 N 0.000
Pavir.J35161 Panicum virgatum Pavir.J35161 N 0.000
SapurV1A.0104s0310 Salix purpurea SapurV1A.0104s0310 N 0.000
SapurV1A.0210s0200 Salix purpurea SapurV1A.0210s0200 N 0.000
SapurV1A.0306s0210 Salix purpurea SapurV1A.0306s0210 N 0.000
SapurV1A.2696s0020 Salix purpurea SapurV1A.2696s0020 N 0.000
Thhalv10009789m.g Eutrema salsugineum Thhalv10009789m.g N 0.000
Thhalv10022828m.g Eutrema salsugineum Thhalv10022828m.g N 0.000
PK04104.1 Cannabis sativa PK04104.1 N 0.000
PK19037.1 Cannabis sativa PK19037.1 N 0.000
chr6.CM0037.1230.nd Lotus japonicus chr6.CM0037.1230.nd N 0.000
LjSGA_033751.1 Lotus japonicus LjSGA_033751.1 N 0.000
PDK_20s1316692g001 Phoenix dactylifera PDK_20s1316692g001 N 0.000
Pavir.Da00255 Panicum virgatum Pavir.Da00255 N 0.000
Pavir.Ab00641 Panicum virgatum Pavir.Ab00641 N 0.000
Pavir.Ab00578 Panicum virgatum Pavir.Ab00578 N 0.000
Eucgr.E04309 Eucalyptus grandis Eucgr.E04309 N 0.000
evm.TU.supercontig_30.133 Carica papaya evm.TU.supercontig_30.133 N 0.000
evm.TU.supercontig_46.74 Carica papaya evm.TU.supercontig_46.74 N 0.000
gene19989-v1.0-hybrid Fragaria vesca gene19989-v1.0-hybrid N 0.000
Gorai.009G013500 Gossypium raimondii Gorai.009G013500 N 0.000
Gorai.010G057300 Gossypium raimondii Gorai.010G057300 N 0.000
Lus10036226.g Linum usitatissimum Lus10036226.g N 0.000
Lus10038365.g Linum usitatissimum Lus10038365.g N 0.000
MDP0000197021 Malus domestica MDP0000197021 N 0.000
MDP0000639526 Malus domestica MDP0000639526 N 0.000
MDP0000891068 Malus domestica MDP0000891068 N 0.000
orange1.1g048158m.g Citrus sinensis orange1.1g048158m.g N 0.000
Pavir.Aa03378 Panicum virgatum Pavir.Aa03378 N 0.000
PDK_20s1530701g001 Phoenix dactylifera PDK_20s1530701g001 N 0.000
Solyc02g068510.1 Solanum lycopersicum Solyc02g068510.1 N 0.000
AMTR_s00032p00241350 Amborella trichopoda AMTR_s00032p00241350 N 0.000
GLYMA09G12330 Glycine max GLYMA09G12330 N 0.000
GLYMA13G23360 Glycine max GLYMA13G23360 N 0.000
GLYMA15G17040 Glycine max GLYMA15G17040 N 0.000
GLYMA15G23920 Glycine max GLYMA15G23920 N 0.000
GLYMA17G11470 Glycine max GLYMA17G11470 N 0.000
GRMZM2G017882 Zea mays GRMZM2G017882 N 0.000
GSMUA_Achr1G09990_001 Musa acuminata GSMUA_Achr1G09990_001 N 0.000
GSMUA_Achr2G02580_001 Musa acuminata GSMUA_Achr2G02580_001 N 0.000
GSMUA_Achr6G20140_001 Musa acuminata GSMUA_Achr6G20140_001 N 0.000
GSMUA_Achr7G03600_001 Musa acuminata GSMUA_Achr7G03600_001 N 0.000
GSMUA_Achr8G33510_001 Musa acuminata GSMUA_Achr8G33510_001 N 0.000
GSMUA_Achr9G22490_001 Musa acuminata GSMUA_Achr9G22490_001 N 0.000
GSMUA_Achr9G30790_001 Musa acuminata GSMUA_Achr9G30790_001 N 0.000
GLYMA09G05781 Glycine max GLYMA09G05781 N 0.000
GLYMA08G09191 Glycine max GLYMA08G09191 N 0.000
GLYMA05G26271 Glycine max GLYMA05G26271 N 0.000
AMTR_s00033p00166000 Amborella trichopoda AMTR_s00033p00166000 N 0.000
AMTR_s00059p00116150 Amborella trichopoda AMTR_s00059p00116150 N 0.000
AT1G31040 Arabidopsis thaliana AT1G31040 N 0.000
BGIOSGA007635 Oryza indica BGIOSGA007635 N 0.000
BGIOSGA023427 Oryza indica BGIOSGA023427 N 0.000
Bo2g121040 Brassica oleracea Bo2g121040 N 0.000
Bo7g041160 Brassica oleracea Bo7g041160 N 0.000
Bra014899 Brassica rapa Bra014899 N 0.000
Bra038403 Brassica rapa Bra038403 N 0.000
BRADI1G32050 Brachypodium distachyon BRADI1G32050 N 0.000
BRADI3G05380 Brachypodium distachyon BRADI3G05380 N 0.000
F775_02274 Aegilops tauschii F775_02274 N 0.000
fgenesh1_pm.C_scaffold_1002523 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1002523 N 0.000
GSMUA_AchrUn_randomG23740_001 Musa acuminata GSMUA_AchrUn_randomG23740_001 N 0.000
LPERR02G04770 Leersia perrieri LPERR02G04770 N 0.000
OPUNC06G21750 Oryza punctata OPUNC06G21750 N 0.000
ORGLA06G0201700 Oryza glaberrima ORGLA06G0201700 N 0.000
ORUFI02G05620 Oryza rufipogon ORUFI02G05620 N 0.000
OS02G0172800 Oryza sativa OS02G0172800 N 0.000
OS06G0666100 Oryza sativa OS06G0666100 N 0.000
POPTR_0001s15920 Populus trichocarpa POPTR_0001s15920 N 0.000
POPTR_0003s07310 Populus trichocarpa POPTR_0003s07310 N 0.000
POPTR_0006s05950 Populus trichocarpa POPTR_0006s05950 N 0.000
POPTR_0018s12380 Populus trichocarpa POPTR_0018s12380 N 0.000
PRUPE_ppa024886mg Prunus persica PRUPE_ppa024886mg N 0.000
Sb04g004830 Sorghum bicolor Sb04g004830 N 0.000
Sb10g026620 Sorghum bicolor Sb10g026620 N 0.000
Si007394m.g Setaria italica Si007394m.g N 0.000
OPUNC02G04680 Oryza punctata OPUNC02G04680 N 0.000
ONIVA03G43780 Oryza nivara ONIVA03G43780 N 0.000
ONIVA02G05860 Oryza nivara ONIVA02G05860 N 0.000
LPERR06G19930 Leersia perrieri LPERR06G19930 N 0.000
MLOC_21744 Hordeum vulgare MLOC_21744 N 0.000
MTR_2g036170 Medicago truncatula MTR_2g036170 N 0.000
MTR_4g094680 Medicago truncatula MTR_4g094680 N 0.000
MTR_4g116300 Medicago truncatula MTR_4g116300 N 0.000
OB02G14750 Oryza brachyantha OB02G14750 N 0.000
OBART02G05520 Oryza barthii OBART02G05520 N 0.000
OBART06G24000 Oryza barthii OBART06G24000 N 0.000
OGLUM02G05380 Oryza glumaepatula OGLUM02G05380 N 0.000
OGLUM06G25260 Oryza glumaepatula OGLUM06G25260 N 0.000
OLONG_011712 Oryza longistaminata OLONG_011712 N 0.000
OLONG_022199 Oryza longistaminata OLONG_022199 N 0.000
OMERI06G23930 Oryza meridionalis OMERI06G23930 N 0.000
Si018139m.g Setaria italica Si018139m.g N 0.000