DREB1D (Arabidopsis thaliana)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 AT5G51990 T000526_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
encodes a member of the DREB subfamily A-1 of ERF/AP2 transcription factor family (CBF4). The protein contains one AP2 domain. There are six members in this subfamily, including CBF1, CBF2, and CBF3. This gene is involved in response to drought stress and abscisic acid treatment, but not to low temperature.

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
DREB1D
M06678_2.00
Arabidopsis thaliana
NHBRCCGACRTNN

NNAYGTCGGYVDN
Dap-seq
OMalley et al.(2016)
CBF4_col_a
(Direct) (Direct)
DREB1D
M06679_2.00
Arabidopsis thaliana
HYRCCGACATND

HNATGTCGGYRD
Dap-seq
OMalley et al.(2016)
CBF4_colamp_a
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
DREB1C
M01623_2.00
Arabidopsis thaliana
RCCGACAT

ATGTCGGY
PBM
Weirauch et al.(2014)
pTH8187
0.800 0.920
DREB1C
M06639_2.00
Arabidopsis thaliana
NNNHBRCCGACATNN

NNATGTCGGYVDNNN
Dap-seq
OMalley et al.(2016)
CBF2_col_a
0.800 0.920
DREB1C
M06640_2.00
Arabidopsis thaliana
NYBRCCGACATVN

NBATGTCGGYVRN
Dap-seq
OMalley et al.(2016)
CBF2_colamp_a
0.800 0.920
DREB1A
M01624_2.00
Arabidopsis thaliana
NRCCGACNNN

NNNGTCGGYN
PBM
Weirauch et al.(2014)
pTH8163
0.778 0.940
DREB1A
M01625_2.00
Arabidopsis thaliana
NNRCCGACNW

WNGTCGGYNN
PBM
Weirauch et al.(2014)
pTH9718
0.778 0.940
DREB1A
M06641_2.00
Arabidopsis thaliana
HNYBRCCGACDWNN

NNWHGTCGGYVRND
Dap-seq
OMalley et al.(2016)
CBF3_col_a
0.778 0.940
DREB1A
M06642_2.00
Arabidopsis thaliana
YBRCCGACATN

NATGTCGGYVR
Dap-seq
OMalley et al.(2016)
CBF3_colamp_a
0.778 0.940
DREB1B
M06643_2.00
Arabidopsis thaliana
DHBRCCGACRHN

NDYGTCGGYVDH
Dap-seq
OMalley et al.(2016)
CBF1_col_a
0.715 0.940
DREB1B
M06644_2.00
Arabidopsis thaliana
NNNHBRCCGACAWNN

NNWTGTCGGYVDNNN
Dap-seq
OMalley et al.(2016)
CBF1_colamp_a
0.715 0.940
DREB1G
M01635_2.00
Oryza sativa
NYGCCGACAN

NTGTCGGCRN
PBM
Weirauch et al.(2014)
pTH8352
0.714 0.800
DREB1G
M09707_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREB1G_01
0.714 0.800
DREB1F
M00962_2.00
Arabidopsis thaliana
NRCCGACNN

NNGTCGGYN
PBM
LehtiShiu et al.(2015)
DDF1_Arabidopsis_thaliana
0.701 0.760
DREB1F
M00840_2.00
Arabidopsis thaliana
NRYCGACNN

NNGTCGRYN
PBM
Franco-Zorrilla et al.(2014)
DDF1
0.701 0.760
DDF1
M00964_2.00
Arabidopsis lyrata
NRYCGACDY

RHGTCGRYN
PBM
LehtiShiu et al.(2015)
DDF1_Arabidopsis_lyrata
0.701 0.760
DREB1F
M06564_2.00
Arabidopsis thaliana
NHNHYGYCGACATNN

NNATGTCGRCRDNDN
Dap-seq
OMalley et al.(2016)
DDF1_col_a
0.701 0.760
DREB1F
M06565_2.00
Arabidopsis thaliana
HNDNNRYCGACAH

DTGTCGRYNNHND
Dap-seq
OMalley et al.(2016)
DDF1_colamp_a
0.701 0.760
DREB1F
M09701_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREB1F_03
0.701 0.760
DREB1E
M09709_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREB1E_01
0.700 0.800
Q8S2T3_BRANA
M09745_2.00
Brassica napus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CBF16_01
0.699 0.880
Q6T3U0_BRANA
M09743_2.00
Brassica napus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREBII1_01
0.699 0.880
Q8S2T5_BRANA
M09746_2.00
Brassica napus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CBF5_01
0.693 0.900
ddf2
M00965_2.00
Arabidopsis lyrata
NRYCGACAT

ATGTCGRYN
PBM
LehtiShiu et al.(2015)
DDF2_Arabidopsis_lyrata
0.678 0.760
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT5G51990.1 AP2 52 103

Links

Other AP2 family TFs
Other Arabidopsis thaliana TFs

216 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Q8S2T5_BRANA Brassica napus Q8S2T5_BRANA D 0.693
DREB1G Oryza sativa OS02G0677300 D 0.714
ddf2 Arabidopsis lyrata fgenesh2_kg.2__175__AT1G63030.1 D 0.678
DDF1 Arabidopsis lyrata fgenesh2_kg.1__1363__AT1G12610.1 D 0.701
DREB1E Oryza sativa OS04G0572400 D 0.700
Q6T3U0_BRANA Brassica napus Q6T3U0_BRANA D 0.699
Q8S2T3_BRANA Brassica napus Q8S2T3_BRANA D 0.699
DREB1C Arabidopsis thaliana AT4G25470 D 0.800
DREB1A Arabidopsis thaliana AT4G25480 D 0.778
DREB1B Arabidopsis thaliana AT4G25490 D 0.715
DREB1F Arabidopsis thaliana AT1G12610 D 0.701
Aquca_122_00013 Aquilegia coerulea Aquca_122_00013 I 0.723
Aquca_013_00435 Aquilegia coerulea Aquca_013_00435 I 0.740
Bostr.7867s0361 Boechera stricta Bostr.7867s0361 I 0.778
Bostr.7867s0360 Boechera stricta Bostr.7867s0360 I 0.804
Aquca_013_00436 Aquilegia coerulea Aquca_013_00436 I 0.738
Bostr.7867s0359 Boechera stricta Bostr.7867s0359 I 0.778
Bostr.22157s0019 Boechera stricta Bostr.22157s0019 I 0.678
Aquca_122_00012 Aquilegia coerulea Aquca_122_00012 I 0.733
Bostr.15774s0346 Boechera stricta Bostr.15774s0346 I 0.839
Bostr.13671s0200 Boechera stricta Bostr.13671s0200 I 0.690
Cagra.0094s0011 Capsella grandiflora Cagra.0094s0011 I 0.839
Carubv10027759m.g Capsella rubella Carubv10027759m.g I 0.839
Ciclev10007068m.g Citrus clementina Ciclev10007068m.g I 0.741
Ciclev10021923m.g Citrus clementina Ciclev10021923m.g I 0.729
Carubv10010303m.g Capsella rubella Carubv10010303m.g I 0.693
Carubv10006965m.g Capsella rubella Carubv10006965m.g I 0.749
Carubv10006809m.g Capsella rubella Carubv10006809m.g I 0.698
Carubv10005709m.g Capsella rubella Carubv10005709m.g I 0.778
Cagra.28753s0001 Capsella grandiflora Cagra.28753s0001 I 0.778
Cagra.2248s0026 Capsella grandiflora Cagra.2248s0026 I 0.801
Gorai.003G162700 Gossypium raimondii Gorai.003G162700 I 0.691
Cagra.2248s0025 Capsella grandiflora Cagra.2248s0025 I 0.693
Cagra.0568s0171 Capsella grandiflora Cagra.0568s0171 I 0.693
Aquca_013_00434 Aquilegia coerulea Aquca_013_00434 I 0.703
Aquca_012_00144 Aquilegia coerulea Aquca_012_00144 I 0.747
cassava35062.m1 Manihot esculenta cassava35062.m1 I 0.807
cassava18935.valid.m1 Manihot esculenta cassava18935.valid.m1 I 0.836
cassava17064.m1 Manihot esculenta cassava17064.m1 I 0.706
60638.m00016 Ricinus communis 60638.m00016 I 0.734
30190.m011120 Ricinus communis 30190.m011120 I 0.761
30190.m011119 Ricinus communis 30190.m011119 I 0.721
30147.m014313 Ricinus communis 30147.m014313 I 0.781
Pm023775 Prunus mume Pm023775 I 0.756
Pm023772 Prunus mume Pm023772 I 0.733
Cla011674 Citrullus lanatus Cla011674 I 0.756
Pm023769 Prunus mume Pm023769 I 0.741
cassava41192.m1 Manihot esculenta cassava41192.m1 I 0.764
cassava41218.m1 Manihot esculenta cassava41218.m1 I 0.702
mgf026642m Mimulus guttatus mgf026642m I 0.801
mgf026339m Mimulus guttatus mgf026339m I 0.741
mgf022408m Mimulus guttatus mgf022408m I 0.720
mgf019061m Mimulus guttatus mgf019061m I 0.742
mgf018934m Mimulus guttatus mgf018934m I 0.720
mgf018631m Mimulus guttatus mgf018631m I 0.720
mgf017136m Mimulus guttatus mgf017136m I 0.758
mgf016974m Mimulus guttatus mgf016974m I 0.720
Cucsa.302750 Cucumis sativus Cucsa.302750 I 0.789
Cucsa.251030 Cucumis sativus Cucsa.251030 I 0.795
Cucsa.166340 Cucumis sativus Cucsa.166340 I 0.776
Pm019386 Prunus mume Pm019386 I 0.702
LjSGA_037211.1 Lotus japonicus LjSGA_037211.1 I 0.713
Pavir.Ga00931 Panicum virgatum Pavir.Ga00931 I 0.687
Pavir.Ab02685 Panicum virgatum Pavir.Ab02685 I 0.714
Pavir.Aa00912 Panicum virgatum Pavir.Aa00912 I 0.714
orange1.1g029015m.g Citrus sinensis orange1.1g029015m.g I 0.766
orange1.1g028094m.g Citrus sinensis orange1.1g028094m.g I 0.741
orange1.1g026103m.g Citrus sinensis orange1.1g026103m.g I 0.722
MDP0000198054 Malus domestica MDP0000198054 I 0.757
MDP0000154764 Malus domestica MDP0000154764 I 0.759
Lus10031657.g Linum usitatissimum Lus10031657.g I 0.756
Lus10029602.g Linum usitatissimum Lus10029602.g I 0.723
SapurV1A.0045s0710 Salix purpurea SapurV1A.0045s0710 I 0.743
SapurV1A.0068s0560 Salix purpurea SapurV1A.0068s0560 I 0.786
SapurV1A.0219s0320 Salix purpurea SapurV1A.0219s0320 I 0.722
chr3.LjT42M03.60.nd Lotus japonicus chr3.LjT42M03.60.nd I 0.720
chr2.CM0304.640.nd Lotus japonicus chr2.CM0304.640.nd I 0.719
PK23332.1 Cannabis sativa PK23332.1 I 0.795
Thhalv10027405m.g Eutrema salsugineum Thhalv10027405m.g I 0.804
Thhalv10023865m.g Eutrema salsugineum Thhalv10023865m.g I 0.678
Thhalv10015252m.g Eutrema salsugineum Thhalv10015252m.g I 0.839
Thhalv10009978m.g Eutrema salsugineum Thhalv10009978m.g I 0.703
SapurV1A.0400s0160 Salix purpurea SapurV1A.0400s0160 I 0.785
SapurV1A.0282s0080 Salix purpurea SapurV1A.0282s0080 I 0.743
SapurV1A.0282s0070 Salix purpurea SapurV1A.0282s0070 I 0.752
Lus10029601.g Linum usitatissimum Lus10029601.g I 0.723
Lus10027412.g Linum usitatissimum Lus10027412.g I 0.753
Lus10019455.g Linum usitatissimum Lus10019455.g I 0.690
Eucgr.A02832 Eucalyptus grandis Eucgr.A02832 I 0.726
Eucgr.A02831 Eucalyptus grandis Eucgr.A02831 I 0.720
Eucgr.A02830 Eucalyptus grandis Eucgr.A02830 I 0.685
Eucgr.A02827 Eucalyptus grandis Eucgr.A02827 I 0.716
Eucgr.A02826 Eucalyptus grandis Eucgr.A02826 I 0.726
Eucgr.A02825 Eucalyptus grandis Eucgr.A02825 I 0.692
Eucgr.A02824 Eucalyptus grandis Eucgr.A02824 I 0.726
Eucgr.A02822 Eucalyptus grandis Eucgr.A02822 I 0.722
Eucgr.A02821 Eucalyptus grandis Eucgr.A02821 I 0.715
Eucgr.A02820 Eucalyptus grandis Eucgr.A02820 I 0.726
Eucgr.A02834 Eucalyptus grandis Eucgr.A02834 I 0.716
Eucgr.D01925 Eucalyptus grandis Eucgr.D01925 I 0.779
Eucgr.E00529 Eucalyptus grandis Eucgr.E00529 I 0.766
Lus10006334.g Linum usitatissimum Lus10006334.g I 0.723
Lus10006332.g Linum usitatissimum Lus10006332.g I 0.723
Lus10001871.g Linum usitatissimum Lus10001871.g I 0.723
Gorai.008G243600 Gossypium raimondii Gorai.008G243600 I 0.749
Gorai.007G010100 Gossypium raimondii Gorai.007G010100 I 0.807
Gorai.006G046200 Gossypium raimondii Gorai.006G046200 I 0.755
gene32378-v1.0-hybrid Fragaria vesca gene32378-v1.0-hybrid I 0.764
gene13329-v1.0-hybrid Fragaria vesca gene13329-v1.0-hybrid I 0.795
evm.TU.supercontig_74.84 Carica papaya evm.TU.supercontig_74.84 I 0.761
evm.TU.supercontig_5.66 Carica papaya evm.TU.supercontig_5.66 I 0.703
Eucgr.A02818 Eucalyptus grandis Eucgr.A02818 I 0.748
OBART02G27760 Oryza barthii OBART02G27760 I 0.714
MTR_1g101600 Medicago truncatula MTR_1g101600 I 0.735
MLOC_75886 Hordeum vulgare MLOC_75886 I 0.719
LPERR04G18190 Leersia perrieri LPERR04G18190 I 0.700
LPERR02G22610 Leersia perrieri LPERR02G22610 I 0.714
GSMUA_Achr8G11980_001 Musa acuminata GSMUA_Achr8G11980_001 I 0.723
GSMUA_Achr7G05900_001 Musa acuminata GSMUA_Achr7G05900_001 I 0.682
GSMUA_Achr4G19660_001 Musa acuminata GSMUA_Achr4G19660_001 I 0.719
GSMUA_Achr2G20280_001 Musa acuminata GSMUA_Achr2G20280_001 I 0.683
GSMUA_Achr11G21630_001 Musa acuminata GSMUA_Achr11G21630_001 I 0.752
GSMUA_Achr10G15510_001 Musa acuminata GSMUA_Achr10G15510_001 I 0.689
GRMZM2G137341 Zea mays GRMZM2G137341 I 0.714
MTR_2g085015 Medicago truncatula MTR_2g085015 I 0.754
MTR_5g010930 Medicago truncatula MTR_5g010930 I 0.688
MTR_8g006410 Medicago truncatula MTR_8g006410 I 0.732
MTR_6g466130 Medicago truncatula MTR_6g466130 I 0.743
MTR_6g466000 Medicago truncatula MTR_6g466000 I 0.736
MTR_6g465850 Medicago truncatula MTR_6g465850 I 0.710
MTR_6g465690 Medicago truncatula MTR_6g465690 I 0.736
MTR_6g465530 Medicago truncatula MTR_6g465530 I 0.714
MTR_6g465510 Medicago truncatula MTR_6g465510 I 0.740
MTR_6g465460 Medicago truncatula MTR_6g465460 I 0.725
MTR_6g465450 Medicago truncatula MTR_6g465450 I 0.719
MTR_6g465430 Medicago truncatula MTR_6g465430 I 0.727
MTR_6g465420 Medicago truncatula MTR_6g465420 I 0.727
GRMZM2G042756 Zea mays GRMZM2G042756 I 0.689
GLYMA20G29410 Glycine max GLYMA20G29410 I 0.741
Bra019162 Brassica rapa Bra019162 I 0.699
Bra016763 Brassica rapa Bra016763 I 0.707
Bra010460 Brassica rapa Bra010460 I 0.691
Bo9g104770 Brassica oleracea Bo9g104770 I 0.839
Bo8g108050 Brassica oleracea Bo8g108050 I 0.698
Bo8g050800 Brassica oleracea Bo8g050800 I 0.691
Bo7g110320 Brassica oleracea Bo7g110320 I 0.699
Bo3g024240 Brassica oleracea Bo3g024240 I 0.693
Bo01335s010 Brassica oleracea Bo01335s010 I 0.707
DREB1E Oryza indica BGIOSGA016950 I 0.700
DREB1G Oryza indica BGIOSGA008804 I 0.714
Bra022770 Brassica rapa Bra022770 I 0.702
Bra026963 Brassica rapa Bra026963 I 0.698
GLYMA13G39540 Glycine max GLYMA13G39540 I 0.770
GLYMA12G30740 Glycine max GLYMA12G30740 I 0.785
GLYMA12G30710 Glycine max GLYMA12G30710 I 0.684
GLYMA12G09130 Glycine max GLYMA12G09130 I 0.726
GLYMA11G19341 Glycine max GLYMA11G19341 I 0.733
GLYMA10G38440 Glycine max GLYMA10G38440 I 0.748
GLYMA09G27180 Glycine max GLYMA09G27180 I 0.781
GLYMA01G42500 Glycine max GLYMA01G42500 I 0.679
CBF2 Arabidopsis lyrata fgenesh2_kg.7__1712__AT4G25470.1 I 0.772
BRADI3G51630 Brachypodium distachyon BRADI3G51630 I 0.719
Bra028290 Brassica rapa Bra028290 I 0.839
AMTR_s00095p00096190 Amborella trichopoda AMTR_s00095p00096190 I 0.709
Cla006315 Citrullus lanatus Cla006315 I 0.793
Solyc03g026280.2 Solanum lycopersicum Solyc03g026280.2 I 0.799
Solyc03g026270.1 Solanum lycopersicum Solyc03g026270.1 I 0.795
Solyc01g009440.1 Solanum lycopersicum Solyc01g009440.1 I 0.690
Si018262m.g Setaria italica Si018262m.g I 0.704
Si011005m.g Setaria italica Si011005m.g I 0.689
CBF4 Arabidopsis lyrata scaffold_801637.1 I 0.839
Sb06g025900 Sorghum bicolor Sb06g025900 I 0.689
Sb04g031950 Sorghum bicolor Sb04g031950 I 0.714
PRUPE_ppa021197mg Prunus persica PRUPE_ppa021197mg I 0.741
PRUPE_ppa017761mg Prunus persica PRUPE_ppa017761mg I 0.697
PRUPE_ppa010935mg Prunus persica PRUPE_ppa010935mg I 0.782
Solyc03g124110.1 Solanum lycopersicum Solyc03g124110.1 I 0.789
Solyc08g007820.1 Solanum lycopersicum Solyc08g007820.1 I 0.701
Cla002362 Citrullus lanatus Cla002362 I 0.826
Ca_18948 Cicer arietinum Ca_18948 I 0.727
Ca_08732 Cicer arietinum Ca_08732 I 0.686
Ca_04504 Cicer arietinum Ca_04504 I 0.713
VIT_16s0100g00380 Vitis vinifera VIT_16s0100g00380 I 0.772
VIT_11s0016g02140 Vitis vinifera VIT_11s0016g02140 I 0.703
VIT_08s0007g03790 Vitis vinifera VIT_08s0007g03790 I 0.679
VIT_06s0061g01400 Vitis vinifera VIT_06s0061g01400 I 0.720
VIT_06s0061g01390 Vitis vinifera VIT_06s0061g01390 I 0.694
VIT_02s0025g04460 Vitis vinifera VIT_02s0025g04460 I 0.754
TCM_016175 Theobroma cacao TCM_016175 I 0.746
PRUPE_ppa010909mg Prunus persica PRUPE_ppa010909mg I 0.745
PRUPE_ppa010800mg Prunus persica PRUPE_ppa010800mg I 0.756
ORUFI04G23890 Oryza rufipogon ORUFI04G23890 I 0.700
ORUFI02G29230 Oryza rufipogon ORUFI02G29230 I 0.714
ORGLA04G0192900 Oryza glaberrima ORGLA04G0192900 I 0.700
OPUNC04G19970 Oryza punctata OPUNC04G19970 I 0.700
OPUNC02G25480 Oryza punctata OPUNC02G25480 I 0.714
ONIVA04G20840 Oryza nivara ONIVA04G20840 I 0.700
ONIVA02G30790 Oryza nivara ONIVA02G30790 I 0.714
OMERI04G18770 Oryza meridionalis OMERI04G18770 I 0.700
OMERI02G26980 Oryza meridionalis OMERI02G26980 I 0.714
OGLUM04G22260 Oryza glumaepatula OGLUM04G22260 I 0.700
OGLUM02G28340 Oryza glumaepatula OGLUM02G28340 I 0.714
PGSC0003DMG400004255 Solanum tuberosum PGSC0003DMG400004255 I 0.729
PGSC0003DMG400012524 Solanum tuberosum PGSC0003DMG400012524 I 0.704
POPTR_0015s13830 Populus trichocarpa POPTR_0015s13830 I 0.801
POPTR_0012s13870 Populus trichocarpa POPTR_0012s13870 I 0.807
POPTR_0009s14990 Populus trichocarpa POPTR_0009s14990 I 0.722
POPTR_0004s19820 Populus trichocarpa POPTR_0004s19820 I 0.722
POPTR_0001s08720 Populus trichocarpa POPTR_0001s08720 I 0.752
POPTR_0001s08710 Populus trichocarpa POPTR_0001s08710 I 0.764
PGSC0003DMG400038366 Solanum tuberosum PGSC0003DMG400038366 I 0.678
PGSC0003DMG400014311 Solanum tuberosum PGSC0003DMG400014311 I 0.787
PGSC0003DMG400014310 Solanum tuberosum PGSC0003DMG400014310 I 0.798
PGSC0003DMG400014309 Solanum tuberosum PGSC0003DMG400014309 I 0.795
PGSC0003DMG400012525 Solanum tuberosum PGSC0003DMG400012525 I 0.727
OBART04G22220 Oryza barthii OBART04G22220 I 0.700