CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ERF025
(
Arabidopsis thaliana
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
AT5G52020
T000527_2.00
Ensembl (2018-Dec-8)
Link out
NCBI Gene Info:
Encodes a MAP kinase induced by pathogens, ethylene biosynthesis, oxidative stress and osmotic stress.Also involved in ovule development. Homozygous mutants in a MPK3 heterozygous background are female sterile due to defects in integument development.MPK6 appears to be associated with the microsomal compartment and may be involved in mediating secretory processes.
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ERF025
M06680_2.00
Arabidopsis thaliana
NNNYYGCCGACANHN
NDNTGTCGGCRRNNN
Dap-seq
OMalley et al.(2016)
Rap210_col_a
(Direct)
(Direct)
ERF025
M06681_2.00
Arabidopsis thaliana
NNNYNRCCGACANN
NNTGTCGGYNRNNN
Dap-seq
OMalley et al.(2016)
Rap210_colamp_a
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT5G52020.1
AP2
63
113
SIFRGIRLRNGKWVSEIREPRKTTRIWLGTYPVPEMAAAAYDVAALALKGP
Links
Other
AP2
family TFs
Other
Arabidopsis thaliana
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
scaffold_801641.1
Arabidopsis lyrata
scaffold_801641.1
I
0.748
Bo2g048150
Brassica oleracea
Bo2g048150
I
0.745
Bostr.15774s0348
Boechera stricta
Bostr.15774s0348
I
0.740
Carubv10027037m.g
Capsella rubella
Carubv10027037m.g
I
0.740
Bra028291
Brassica rapa
Bra028291
I
0.739
Bo9g104780
Brassica oleracea
Bo9g104780
I
0.737
Bra022573
Brassica rapa
Bra022573
I
0.734
Thhalv10014566m.g
Eutrema salsugineum
Thhalv10014566m.g
I
0.730
Bra029147
Brassica rapa
Bra029147
I
0.727
Bo3g023490
Brassica oleracea
Bo3g023490
I
0.727
MDP0000262710
Malus domestica
MDP0000262710
I
0.682