BGIOSGA008802 (Oryza indica)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 BGIOSGA008802 T000576_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT1G63040
M06590_2.00
Arabidopsis thaliana
TTGAAA

TTTCAA
Dap-seq
OMalley et al.(2016)
AT1G63040_col_a
0.681 0.833
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGIOSGA008802-PA AP2 70 119

Links

Other AP2 family TFs
Other Oryza indica TFs

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ONIVA02G30630 Oryza nivara ONIVA02G30630 I 0.766
OMERI02G26970 Oryza meridionalis OMERI02G26970 I 0.766
OGLUM02G28310 Oryza glumaepatula OGLUM02G28310 I 0.766
OPUNC02G25450 Oryza punctata OPUNC02G25450 I 0.766
OS02G0676800 Oryza sativa OS02G0676800 I 0.766
Pavir.Ab02683 Panicum virgatum Pavir.Ab02683 I 0.766
Si018039m.g Setaria italica Si018039m.g I 0.766
Sb04g031960 Sorghum bicolor Sb04g031960 I 0.766
OBART02G27750 Oryza barthii OBART02G27750 I 0.766
ORUFI02G29210 Oryza rufipogon ORUFI02G29210 I 0.766
GRMZM2G000520 Zea mays GRMZM2G000520 I 0.766
LPERR02G22600 Leersia perrieri LPERR02G22600 I 0.766
GRMZM2G434203 Zea mays GRMZM2G434203 I 0.744
MLOC_62554 Hordeum vulgare MLOC_62554 N 0.727
Traes_6DL_FD6D63D1A Triticum aestivum Traes_6DL_FD6D63D1A N 0.727
BRADI3G51610 Brachypodium distachyon BRADI3G51610 N 0.725
Gorai.003G162600 Gossypium raimondii Gorai.003G162600 I 0.709
Cagra.6357s0007 Capsella grandiflora Cagra.6357s0007 I 0.684
TCM_016176 Theobroma cacao TCM_016176 I 0.684
Carubv10022214m.g Capsella rubella Carubv10022214m.g I 0.684
LPERR04G18180 Leersia perrieri LPERR04G18180 N 0.683
Carubv10012147m.g Capsella rubella Carubv10012147m.g I 0.683
Thhalv10009659m.g Eutrema salsugineum Thhalv10009659m.g I 0.683
OBART04G22210 Oryza barthii OBART04G22210 N 0.682
BGIOSGA016949 Oryza indica BGIOSGA016949 N 0.682
Cla011673 Citrullus lanatus Cla011673 I 0.682
OMERI04G18760 Oryza meridionalis OMERI04G18760 N 0.682
Solyc08g080290.2 Solanum lycopersicum Solyc08g080290.2 I 0.682
OGLUM04G22250 Oryza glumaepatula OGLUM04G22250 N 0.682
ONIVA04G20830 Oryza nivara ONIVA04G20830 N 0.682
ORUFI04G23880 Oryza rufipogon ORUFI04G23880 N 0.682
OS04G0572200 Oryza sativa OS04G0572200 N 0.682
PGSC0003DMG400022759 Solanum tuberosum PGSC0003DMG400022759 I 0.682
AT1G63040 Arabidopsis thaliana AT1G63040 D 0.681
Cagra.0568s0175 Capsella grandiflora Cagra.0568s0175 I 0.678
scaffold_101390.1 Arabidopsis lyrata scaffold_101390.1 I 0.677
Cucsa.302760 Cucumis sativus Cucsa.302760 I 0.677
Bo9g028820 Brassica oleracea Bo9g028820 I 0.677
fgenesh1_pm.C_scaffold_1001063 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1001063 I 0.677