DREB1E (Oryza indica)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 BGIOSGA016950 T000615_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
DREB1E
M09709_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREB1E_01
0.854 1.000
DREB1G
M01635_2.00
Oryza sativa
NYGCCGACAN

NTGTCGGCRN
PBM
Weirauch et al.(2014)
pTH8352
0.808 0.940
DREB1G
M09707_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREB1G_01
0.808 0.940
DREB1C
M01623_2.00
Arabidopsis thaliana
RCCGACAT

ATGTCGGY
PBM
Weirauch et al.(2014)
pTH8187
0.705 0.780
DREB1C
M06639_2.00
Arabidopsis thaliana
NNNHBRCCGACATNN

NNATGTCGGYVDNNN
Dap-seq
OMalley et al.(2016)
CBF2_col_a
0.705 0.780
DREB1C
M06640_2.00
Arabidopsis thaliana
NYBRCCGACATVN

NBATGTCGGYVRN
Dap-seq
OMalley et al.(2016)
CBF2_colamp_a
0.705 0.780
DREB1A
M01624_2.00
Arabidopsis thaliana
NRCCGACNNN

NNNGTCGGYN
PBM
Weirauch et al.(2014)
pTH8163
0.701 0.800
DREB1A
M01625_2.00
Arabidopsis thaliana
NNRCCGACNW

WNGTCGGYNN
PBM
Weirauch et al.(2014)
pTH9718
0.701 0.800
DREB1A
M06641_2.00
Arabidopsis thaliana
HNYBRCCGACDWNN

NNWHGTCGGYVRND
Dap-seq
OMalley et al.(2016)
CBF3_col_a
0.701 0.800
DREB1A
M06642_2.00
Arabidopsis thaliana
YBRCCGACATN

NATGTCGGYVR
Dap-seq
OMalley et al.(2016)
CBF3_colamp_a
0.701 0.800
DREB1D
M06678_2.00
Arabidopsis thaliana
NHBRCCGACRTNN

NNAYGTCGGYVDN
Dap-seq
OMalley et al.(2016)
CBF4_col_a
0.700 0.800
DREB1D
M06679_2.00
Arabidopsis thaliana
HYRCCGACATND

HNATGTCGGYRD
Dap-seq
OMalley et al.(2016)
CBF4_colamp_a
0.700 0.800
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGIOSGA016950-PA AP2 51 102

Links

Other AP2 family TFs
Other Oryza indica TFs

84 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
30147.m014313 Ricinus communis 30147.m014313 I 0.696
30190.m011120 Ricinus communis 30190.m011120 I 0.685
Aquca_012_00144 Aquilegia coerulea Aquca_012_00144 I 0.738
Aquca_013_00434 Aquilegia coerulea Aquca_013_00434 I 0.694
Aquca_013_00435 Aquilegia coerulea Aquca_013_00435 I 0.731
Aquca_013_00436 Aquilegia coerulea Aquca_013_00436 I 0.730
Bo9g104770 Brassica oleracea Bo9g104770 I 0.700
Bostr.15774s0346 Boechera stricta Bostr.15774s0346 I 0.700
Bostr.7867s0359 Boechera stricta Bostr.7867s0359 I 0.699
Bostr.7867s0360 Boechera stricta Bostr.7867s0360 I 0.690
Bostr.7867s0361 Boechera stricta Bostr.7867s0361 I 0.699
Bra028290 Brassica rapa Bra028290 I 0.700
BRADI3G51630 Brachypodium distachyon BRADI3G51630 I 0.793
Cagra.0094s0011 Capsella grandiflora Cagra.0094s0011 I 0.700
Cagra.2248s0026 Capsella grandiflora Cagra.2248s0026 I 0.693
Cagra.28753s0001 Capsella grandiflora Cagra.28753s0001 I 0.699
Carubv10005709m.g Capsella rubella Carubv10005709m.g I 0.699
Carubv10027759m.g Capsella rubella Carubv10027759m.g I 0.700
cassava18935.valid.m1 Manihot esculenta cassava18935.valid.m1 I 0.703
cassava35062.m1 Manihot esculenta cassava35062.m1 I 0.696
CBF2 Arabidopsis lyrata fgenesh2_kg.7__1712__AT4G25470.1 I 0.697
CBF4 Arabidopsis lyrata scaffold_801637.1 I 0.700
Cla002362 Citrullus lanatus Cla002362 I 0.695
Cla006315 Citrullus lanatus Cla006315 I 0.685
Cucsa.166340 Cucumis sativus Cucsa.166340 I 0.680
Cucsa.251030 Cucumis sativus Cucsa.251030 I 0.687
DREB1A Arabidopsis thaliana AT4G25480 D 0.701
DREB1C Arabidopsis thaliana AT4G25470 D 0.705
DREB1D Arabidopsis thaliana AT5G51990 D 0.700
DREB1E Oryza sativa OS04G0572400 D 0.854
DREB1G Oryza indica BGIOSGA008804 I 0.808
DREB1G Oryza sativa OS02G0677300 D 0.808
Eucgr.D01925 Eucalyptus grandis Eucgr.D01925 I 0.686
Eucgr.E00529 Eucalyptus grandis Eucgr.E00529 I 0.686
gene13329-v1.0-hybrid Fragaria vesca gene13329-v1.0-hybrid I 0.691
GLYMA09G27180 Glycine max GLYMA09G27180 I 0.690
Gorai.007G010100 Gossypium raimondii Gorai.007G010100 I 0.696
GRMZM2G042756 Zea mays GRMZM2G042756 I 0.826
GRMZM2G137341 Zea mays GRMZM2G137341 I 0.808
GSMUA_Achr11G21630_001 Musa acuminata GSMUA_Achr11G21630_001 I 0.693
GSMUA_Achr8G11980_001 Musa acuminata GSMUA_Achr8G11980_001 I 0.697
LPERR02G22610 Leersia perrieri LPERR02G22610 I 0.808
LPERR04G18190 Leersia perrieri LPERR04G18190 I 0.854
mgf026642m Mimulus guttatus mgf026642m I 0.694
MLOC_75886 Hordeum vulgare MLOC_75886 I 0.793
MTR_6g465420 Medicago truncatula MTR_6g465420 I 0.688
MTR_6g465460 Medicago truncatula MTR_6g465460 I 0.684
MTR_6g465510 Medicago truncatula MTR_6g465510 I 0.684
MTR_6g465690 Medicago truncatula MTR_6g465690 I 0.680
MTR_6g466000 Medicago truncatula MTR_6g466000 I 0.680
OBART02G27760 Oryza barthii OBART02G27760 I 0.808
OBART04G22220 Oryza barthii OBART04G22220 I 0.854
OGLUM02G28340 Oryza glumaepatula OGLUM02G28340 I 0.808
OGLUM04G22260 Oryza glumaepatula OGLUM04G22260 I 0.854
OMERI02G26980 Oryza meridionalis OMERI02G26980 I 0.808
OMERI04G18770 Oryza meridionalis OMERI04G18770 I 0.854
ONIVA02G30790 Oryza nivara ONIVA02G30790 I 0.808
ONIVA04G20840 Oryza nivara ONIVA04G20840 I 0.854
OPUNC02G25480 Oryza punctata OPUNC02G25480 I 0.808
OPUNC04G19970 Oryza punctata OPUNC04G19970 I 0.854
ORGLA04G0192900 Oryza glaberrima ORGLA04G0192900 I 0.854
ORUFI02G29230 Oryza rufipogon ORUFI02G29230 I 0.808
ORUFI04G23890 Oryza rufipogon ORUFI04G23890 I 0.854
Pavir.Aa00912 Panicum virgatum Pavir.Aa00912 I 0.808
Pavir.Ab02685 Panicum virgatum Pavir.Ab02685 I 0.808
Pavir.Ga00931 Panicum virgatum Pavir.Ga00931 I 0.816
PGSC0003DMG400014309 Solanum tuberosum PGSC0003DMG400014309 I 0.691
PGSC0003DMG400014310 Solanum tuberosum PGSC0003DMG400014310 I 0.688
PGSC0003DMG400014311 Solanum tuberosum PGSC0003DMG400014311 I 0.691
PK23332.1 Cannabis sativa PK23332.1 I 0.691
POPTR_0001s08710 Populus trichocarpa POPTR_0001s08710 I 0.680
POPTR_0012s13870 Populus trichocarpa POPTR_0012s13870 I 0.696
POPTR_0015s13830 Populus trichocarpa POPTR_0015s13830 I 0.690
PRUPE_ppa010935mg Prunus persica PRUPE_ppa010935mg I 0.678
SapurV1A.0068s0560 Salix purpurea SapurV1A.0068s0560 I 0.685
Sb04g031950 Sorghum bicolor Sb04g031950 I 0.808
Sb06g025900 Sorghum bicolor Sb06g025900 I 0.826
Si011005m.g Setaria italica Si011005m.g I 0.826
Si018262m.g Setaria italica Si018262m.g I 0.798
Solyc03g026270.1 Solanum lycopersicum Solyc03g026270.1 I 0.698
Solyc03g026280.2 Solanum lycopersicum Solyc03g026280.2 I 0.693
Solyc03g124110.1 Solanum lycopersicum Solyc03g124110.1 I 0.693
Thhalv10015252m.g Eutrema salsugineum Thhalv10015252m.g I 0.700
Thhalv10027405m.g Eutrema salsugineum Thhalv10027405m.g I 0.690