BGIOSGA022471 (Oryza indica)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 BGIOSGA022471 T000645_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF018
M00842_2.00
Arabidopsis thaliana
HRCCGDCMN

NKGHCGGYD
PBM
Franco-Zorrilla et al.(2014)
ORA47
0.691 0.860
ERF018
M01610_2.00
Arabidopsis thaliana
NRCCGNCHN

NDGNCGGYN
PBM
Weirauch et al.(2014)
pTH7215
0.691 0.860
ERF017
M06568_2.00
Arabidopsis thaliana
NHNYCRCCGWCMWH

DWKGWCGGYGRNDN
Dap-seq
OMalley et al.(2016)
At1g19210_col_a
0.688 0.860
ERF017
M06569_2.00
Arabidopsis thaliana
NNNHNNCRCCGWCMW

WKGWCGGYGNNDNNN
Dap-seq
OMalley et al.(2016)
At1g19210_colamp_a
0.688 0.860
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGIOSGA022471-PA AP2 10 61

Links

Other AP2 family TFs
Other Oryza indica TFs

68 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ORUFI06G06480 Oryza rufipogon ORUFI06G06480 I 0.814
ORGLA06G0057200 Oryza glaberrima ORGLA06G0057200 I 0.812
ONIVA06G07190 Oryza nivara ONIVA06G07190 I 0.812
OGLUM06G06520 Oryza glumaepatula OGLUM06G06520 I 0.812
OMERI03G32210 Oryza meridionalis OMERI03G32210 I 0.812
OBART06G06190 Oryza barthii OBART06G06190 I 0.812
Si008104m.g Setaria italica Si008104m.g I 0.738
MTR_3g105480 Medicago truncatula MTR_3g105480 I 0.710
MTR_3g105510 Medicago truncatula MTR_3g105510 I 0.710
Eucgr.C03175 Eucalyptus grandis Eucgr.C03175 I 0.705
PGSC0003DMG400030781 Solanum tuberosum PGSC0003DMG400030781 I 0.704
Solyc06g054630.1 Solanum lycopersicum Solyc06g054630.1 I 0.704
Bo6g086740 Brassica oleracea Bo6g086740 I 0.699
Carubv10020965m.g Capsella rubella Carubv10020965m.g I 0.699
Cagra.0402s0035 Capsella grandiflora Cagra.0402s0035 I 0.699
GSMUA_Achr9G14360_001 Musa acuminata GSMUA_Achr9G14360_001 I 0.697
OGLUM08G17690 Oryza glumaepatula OGLUM08G17690 I 0.696
OS08G0454000 Oryza sativa OS08G0454000 I 0.696
Pavir.Fb01602 Panicum virgatum Pavir.Fb01602 I 0.696
Pavir.Fa00741 Panicum virgatum Pavir.Fa00741 I 0.696
Si015027m.g Setaria italica Si015027m.g I 0.696
OPUNC08G14840 Oryza punctata OPUNC08G14840 I 0.696
ONIVA08G18470 Oryza nivara ONIVA08G18470 I 0.696
ORUFI08G18850 Oryza rufipogon ORUFI08G18850 I 0.696
BGIOSGA028781 Oryza indica BGIOSGA028781 I 0.696
LPERR08G14000 Leersia perrieri LPERR08G14000 I 0.696
GRMZM2G163745 Zea mays GRMZM2G163745 I 0.696
OBART08G16950 Oryza barthii OBART08G16950 I 0.696
OB08G24280 Oryza brachyantha OB08G24280 I 0.696
Thhalv10009812m.g Eutrema salsugineum Thhalv10009812m.g I 0.695
OB06G15740 Oryza brachyantha OB06G15740 N 0.695
Bra003780 Brassica rapa Bra003780 I 0.692
Pavir.J00593 Panicum virgatum Pavir.J00593 I 0.692
Eucgr.C03297 Eucalyptus grandis Eucgr.C03297 I 0.691
Bostr.3288s0141 Boechera stricta Bostr.3288s0141 I 0.691
ERF018 Arabidopsis thaliana AT1G74930 D 0.691
ORA47 Arabidopsis lyrata fgenesh2_kg.2__1761__AT1G74930.1 I 0.691
Si019636m.g Setaria italica Si019636m.g I 0.690
Pavir.Aa00296 Panicum virgatum Pavir.Aa00296 I 0.690
Traes_6DL_FA861D610 Triticum aestivum Traes_6DL_FA861D610 I 0.690
TRAES3BF084200010CFD_g Triticum aestivum TRAES3BF084200010CFD_g I 0.689
fgenesh2_kg.1__2098__AT1G19210.1 Arabidopsis lyrata fgenesh2_kg.1__2098__AT1G19210.1 I 0.688
Carubv10011394m.g Capsella rubella Carubv10011394m.g I 0.688
Bo8g102870 Brassica oleracea Bo8g102870 I 0.688
ERF017 Arabidopsis thaliana AT1G19210 D 0.688
SapurV1A.2229s0010 Salix purpurea SapurV1A.2229s0010 I 0.688
SapurV1A.0373s0040 Salix purpurea SapurV1A.0373s0040 I 0.688
POPTR_0006s23480 Populus trichocarpa POPTR_0006s23480 I 0.688
Cagra.1961s0079 Capsella grandiflora Cagra.1961s0079 I 0.688
ORA47 Vitis vinifera VIT_04s0008g02230 I 0.688
Bra031069 Brassica rapa Bra031069 I 0.688
BRADI3G37544 Brachypodium distachyon BRADI3G37544 I 0.687
F775_23111 Aegilops tauschii F775_23111 I 0.686
gene12919-v1.0-hybrid Fragaria vesca gene12919-v1.0-hybrid I 0.686
evm.TU.supercontig_266.5 Carica papaya evm.TU.supercontig_266.5 I 0.685
mgf024162m Mimulus guttatus mgf024162m I 0.684
GRMZM2G097081 Zea mays GRMZM2G097081 I 0.684
TCM_037486 Theobroma cacao TCM_037486 I 0.684
cassava10604.m1 Manihot esculenta cassava10604.m1 I 0.683
SapurV1A.0057s0300 Salix purpurea SapurV1A.0057s0300 I 0.683
Bo6g119120 Brassica oleracea Bo6g119120 I 0.680
PGSC0003DMG400023295 Solanum tuberosum PGSC0003DMG400023295 N 0.679
mgf017314m Mimulus guttatus mgf017314m N 0.679
OMERI06G09430 Oryza meridionalis OMERI06G09430 N 0.678
OGLUM06G08330 Oryza glumaepatula OGLUM06G08330 N 0.678
mgf021940m Mimulus guttatus mgf021940m I 0.678
LPERR02G28660 Leersia perrieri LPERR02G28660 I 0.677
Solyc07g042230.1 Solanum lycopersicum Solyc07g042230.1 N 0.677