BGIOSGA024428 (Oryza indica)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 BGIOSGA024428 T000657_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
P93392_TOBAC
M09731_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$OPBP1_01 		0.714 0.776
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGIOSGA024428-PA AP2 75 127

Links

Other AP2 family TFs
Other Oryza indica TFs

233 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ONIVA07G09500 Oryza nivara ONIVA07G09500 I 0.804
OGLUM07G10880 Oryza glumaepatula OGLUM07G10880 I 0.804
OBART07G11340 Oryza barthii OBART07G11340 I 0.804
ORGLA07G0097100 Oryza glaberrima ORGLA07G0097100 I 0.804
OS07G0410700 Oryza sativa OS07G0410700 I 0.804
ORUFI07G11590 Oryza rufipogon ORUFI07G11590 I 0.804
OPUNC07G10310 Oryza punctata OPUNC07G10310 I 0.802
LPERR07G06830 Leersia perrieri LPERR07G06830 I 0.800
Pavir.Bb00962 Panicum virgatum Pavir.Bb00962 I 0.799
AC233933.1_FG001 Zea mays AC233933.1_FG001 I 0.799
Pavir.Ba02374 Panicum virgatum Pavir.Ba02374 I 0.797
OGLUM07G10870 Oryza glumaepatula OGLUM07G10870 I 0.762
MDP0000322279 Malus domestica MDP0000322279 I 0.742
GRMZM2G073258 Zea mays GRMZM2G073258 I 0.740
GRMZM5G837876 Zea mays GRMZM5G837876 I 0.740
OBART07G11330 Oryza barthii OBART07G11330 I 0.738
ONIVA01G50300 Oryza nivara ONIVA01G50300 I 0.738
ORUFI07G11580 Oryza rufipogon ORUFI07G11580 I 0.738
BGIOSGA024429 Oryza indica BGIOSGA024429 I 0.738
ORGLA07G0097000 Oryza glaberrima ORGLA07G0097000 I 0.738
cassava22677.valid.m1 Manihot esculenta cassava22677.valid.m1 I 0.734
Si027485m.g Setaria italica Si027485m.g I 0.733
cassava47179.m1 Manihot esculenta cassava47179.m1 I 0.733
Pavir.Hb01336 Panicum virgatum Pavir.Hb01336 I 0.733
Pavir.Ha01264 Panicum virgatum Pavir.Ha01264 I 0.733
Gorai.005G049300 Gossypium raimondii Gorai.005G049300 I 0.732
Si028088m.g Setaria italica Si028088m.g I 0.732
Si032815m.g Setaria italica Si032815m.g I 0.731
LjSGA_017232.1 Lotus japonicus LjSGA_017232.1 I 0.730
GLYMA10G04210 Glycine max GLYMA10G04210 I 0.730
GLYMA13G18410 Glycine max GLYMA13G18410 I 0.730
Ciclev10021622m.g Citrus clementina Ciclev10021622m.g I 0.730
orange1.1g042174m.g Citrus sinensis orange1.1g042174m.g I 0.730
GRMZM2G478965 Zea mays GRMZM2G478965 I 0.729
POPTR_0002s04020 Populus trichocarpa POPTR_0002s04020 I 0.729
MDP0000447570 Malus domestica MDP0000447570 I 0.729
SapurV1A.0006s0850 Salix purpurea SapurV1A.0006s0850 I 0.729
Cucsa.062330 Cucumis sativus Cucsa.062330 I 0.729
MTR_1g069945 Medicago truncatula MTR_1g069945 I 0.729
MDP0000246808 Malus domestica MDP0000246808 I 0.729
Ca_07754 Cicer arietinum Ca_07754 I 0.729
Pavir.Hb01074 Panicum virgatum Pavir.Hb01074 I 0.728
GRMZM2G379652 Zea mays GRMZM2G379652 I 0.728
Ca_12081 Cicer arietinum Ca_12081 I 0.728
MTR_1g074370 Medicago truncatula MTR_1g074370 I 0.728
SapurV1A.0233s0370 Salix purpurea SapurV1A.0233s0370 I 0.727
POPTR_0005s24460 Populus trichocarpa POPTR_0005s24460 I 0.727
POPTR_0010s08300 Populus trichocarpa POPTR_0010s08300 I 0.726
GSMUA_Achr4G05520_001 Musa acuminata GSMUA_Achr4G05520_001 I 0.726
SapurV1A.0007s0980 Salix purpurea SapurV1A.0007s0980 I 0.726
SapurV1A.2490s0030 Salix purpurea SapurV1A.2490s0030 I 0.726
GLYMA13G18390 Glycine max GLYMA13G18390 I 0.724
Pavir.J02630 Panicum virgatum Pavir.J02630 I 0.724
Pavir.Ha00307 Panicum virgatum Pavir.Ha00307 I 0.724
Gorai.007G281000 Gossypium raimondii Gorai.007G281000 I 0.724
TCM_026233 Theobroma cacao TCM_026233 I 0.724
GLYMA13G18350 Glycine max GLYMA13G18350 I 0.724
Cucsa.255340 Cucumis sativus Cucsa.255340 I 0.723
Sb05g022110 Sorghum bicolor Sb05g022110 I 0.723
chr5.CM0341.90.nc Lotus japonicus chr5.CM0341.90.nc I 0.723
OPUNC09G18690 Oryza punctata OPUNC09G18690 I 0.722
OB09G27130 Oryza brachyantha OB09G27130 I 0.722
Aquca_034_00376 Aquilegia coerulea Aquca_034_00376 I 0.721
Pavir.J30299 Panicum virgatum Pavir.J30299 I 0.721
GRMZM2G123119 Zea mays GRMZM2G123119 I 0.721
Cla021850 Citrullus lanatus Cla021850 I 0.721
Pavir.Ha01200 Panicum virgatum Pavir.Ha01200 I 0.720
ORUFI09G22040 Oryza rufipogon ORUFI09G22040 I 0.719
Pavir.J37124 Panicum virgatum Pavir.J37124 I 0.719
OLONG_005597 Oryza longistaminata OLONG_005597 I 0.719
OS09G0572000 Oryza sativa OS09G0572000 I 0.719
Pavir.Ba02781 Panicum virgatum Pavir.Ba02781 I 0.719
Sb02g012630 Sorghum bicolor Sb02g012630 I 0.719
ONIVA09G20840 Oryza nivara ONIVA09G20840 I 0.719
OGLUM09G21150 Oryza glumaepatula OGLUM09G21150 I 0.719
OBART09G20410 Oryza barthii OBART09G20410 I 0.719
Si031946m.g Setaria italica Si031946m.g I 0.719
BGIOSGA031313 Oryza indica BGIOSGA031313 I 0.719
LPERR09G16380 Leersia perrieri LPERR09G16380 I 0.719
Gorai.004G057000 Gossypium raimondii Gorai.004G057000 I 0.718
GLYMA19G43815 Glycine max GLYMA19G43815 I 0.717
MTR_1g069940 Medicago truncatula MTR_1g069940 I 0.716
mgf023600m Mimulus guttatus mgf023600m I 0.715
Gorai.001G253100 Gossypium raimondii Gorai.001G253100 I 0.715
P93392_TOBAC Nicotiana tabacum P93392_TOBAC D 0.714
GLYMA10G04170 Glycine max GLYMA10G04170 I 0.714
Si038911m.g Setaria italica Si038911m.g I 0.714
SapurV1A.0021s0980 Salix purpurea SapurV1A.0021s0980 I 0.713
Cla006080 Citrullus lanatus Cla006080 I 0.713
Traes_4AL_1A0E673DC Triticum aestivum Traes_4AL_1A0E673DC I 0.713
Traes_4AL_5E86DF14B Triticum aestivum Traes_4AL_5E86DF14B I 0.713
BRADI1G00670 Brachypodium distachyon BRADI1G00670 I 0.713
F775_22020 Aegilops tauschii F775_22020 I 0.713
OPUNC03G38860 Oryza punctata OPUNC03G38860 I 0.711
evm.TU.supercontig_162.25 Carica papaya evm.TU.supercontig_162.25 I 0.711
cassava38509.m1 Manihot esculenta cassava38509.m1 I 0.711
cassava632.valid.m1 Manihot esculenta cassava632.valid.m1 I 0.711
POPTR_0013s04240 Populus trichocarpa POPTR_0013s04240 I 0.711
Pavir.Ia00066 Panicum virgatum Pavir.Ia00066 I 0.711
GLYMA13G18340 Glycine max GLYMA13G18340 I 0.711
orange1.1g047387m.g Citrus sinensis orange1.1g047387m.g I 0.710
Ciclev10024142m.g Citrus clementina Ciclev10024142m.g I 0.710
Aquca_017_00711 Aquilegia coerulea Aquca_017_00711 I 0.710
chr6.CM1613.110.nc Lotus japonicus chr6.CM1613.110.nc I 0.710
Traes_4BL_39AE2989D Triticum aestivum Traes_4BL_39AE2989D I 0.709
MLOC_77420 Hordeum vulgare MLOC_77420 I 0.709
POPTR_0008s16610 Populus trichocarpa POPTR_0008s16610 I 0.709
Cucsa.053560 Cucumis sativus Cucsa.053560 I 0.709
mgf018693m Mimulus guttatus mgf018693m I 0.709
MLOC_80197 Hordeum vulgare MLOC_80197 I 0.709
Traes_5DL_53D8DF9CD Triticum aestivum Traes_5DL_53D8DF9CD I 0.709
Traes_5BL_4E044468C Triticum aestivum Traes_5BL_4E044468C I 0.709
MDP0000855671 Malus domestica MDP0000855671 I 0.709
F775_25471 Aegilops tauschii F775_25471 I 0.709
Traes_2BL_0B09B840B Triticum aestivum Traes_2BL_0B09B840B I 0.709
F775_52314 Aegilops tauschii F775_52314 I 0.709
Pm009382 Prunus mume Pm009382 I 0.708
MDP0000127134 Malus domestica MDP0000127134 I 0.708
evm.TU.supercontig_44.71 Carica papaya evm.TU.supercontig_44.71 I 0.708
Lus10021193.g Linum usitatissimum Lus10021193.g I 0.708
Lus10011829.g Linum usitatissimum Lus10011829.g I 0.708
Cla007697 Citrullus lanatus Cla007697 I 0.708
MDP0000167207 Malus domestica MDP0000167207 I 0.708
AMTR_s00009p00143340 Amborella trichopoda AMTR_s00009p00143340 I 0.708
Pavir.J01078 Panicum virgatum Pavir.J01078 I 0.708
GLYMA10G33060 Glycine max GLYMA10G33060 I 0.708
GLYMA20G34570 Glycine max GLYMA20G34570 I 0.708
PRUPE_ppa024173mg Prunus persica PRUPE_ppa024173mg I 0.708
orange1.1g039409m.g Citrus sinensis orange1.1g039409m.g I 0.708
MTR_1g043350 Medicago truncatula MTR_1g043350 I 0.708
Ca_23170 Cicer arietinum Ca_23170 I 0.708
Ciclev10005820m.g Citrus clementina Ciclev10005820m.g I 0.708
MDP0000235313 Malus domestica MDP0000235313 I 0.708
Gorai.007G145800 Gossypium raimondii Gorai.007G145800 I 0.707
SapurV1A.4312s0010 Salix purpurea SapurV1A.4312s0010 I 0.707
SapurV1A.0233s0360 Salix purpurea SapurV1A.0233s0360 I 0.707
29895.m000321 Ricinus communis 29895.m000321 I 0.706
cassava37347.valid.m1 Manihot esculenta cassava37347.valid.m1 I 0.706
cassava38166.valid.m1 Manihot esculenta cassava38166.valid.m1 I 0.706
Sb02g005810 Sorghum bicolor Sb02g005810 I 0.706
29584.m000234 Ricinus communis 29584.m000234 I 0.706
Sb02g005840 Sorghum bicolor Sb02g005840 I 0.706
Lus10022935.g Linum usitatissimum Lus10022935.g I 0.705
Pavir.J28684 Panicum virgatum Pavir.J28684 I 0.705
Traes_4DL_CB92B5ABB Triticum aestivum Traes_4DL_CB92B5ABB I 0.705
Pavir.Ba03491 Panicum virgatum Pavir.Ba03491 I 0.705
F775_22331 Aegilops tauschii F775_22331 I 0.705
TCM_004056 Theobroma cacao TCM_004056 I 0.705
F775_01237 Aegilops tauschii F775_01237 N 0.704
Pavir.J16149 Panicum virgatum Pavir.J16149 I 0.703
gene11442-v1.0-hybrid Fragaria vesca gene11442-v1.0-hybrid I 0.703
Traes_2BS_0EE99D4A6 Triticum aestivum Traes_2BS_0EE99D4A6 I 0.703
Gorai.001G176800 Gossypium raimondii Gorai.001G176800 I 0.702
GSMUA_Achr6G27040_001 Musa acuminata GSMUA_Achr6G27040_001 I 0.702
Si033089m.g Setaria italica Si033089m.g I 0.702
POPTR_0019s03170 Populus trichocarpa POPTR_0019s03170 I 0.701
Gorai.013G186700 Gossypium raimondii Gorai.013G186700 I 0.701
Lus10021873.g Linum usitatissimum Lus10021873.g I 0.701
Lus10022015.g Linum usitatissimum Lus10022015.g I 0.701
TCM_026234 Theobroma cacao TCM_026234 I 0.701
TCM_020871 Theobroma cacao TCM_020871 I 0.701
Lus10042557.g Linum usitatissimum Lus10042557.g I 0.701
GSMUA_Achr1G01380_001 Musa acuminata GSMUA_Achr1G01380_001 I 0.701
POPTR_0102s00200 Populus trichocarpa POPTR_0102s00200 I 0.701
Pm020604 Prunus mume Pm020604 I 0.700
GSMUA_AchrUn_randomG10760_001 Musa acuminata GSMUA_AchrUn_randomG10760_001 I 0.700
TRIUR3_29784 Triticum urartu TRIUR3_29784 I 0.700
GLYMA10G00980 Glycine max GLYMA10G00980 I 0.700
PRUPE_ppa023839mg Prunus persica PRUPE_ppa023839mg I 0.700
TCM_004052 Theobroma cacao TCM_004052 I 0.700
gene08077-v1.0-hybrid Fragaria vesca gene08077-v1.0-hybrid I 0.700
29680.m001678 Ricinus communis 29680.m001678 I 0.699
GLYMA13G18370 Glycine max GLYMA13G18370 I 0.699
Ca_12221 Cicer arietinum Ca_12221 I 0.699
VIT_05s0049g00510 Vitis vinifera VIT_05s0049g00510 I 0.699
Sb01g000352 Sorghum bicolor Sb01g000352 I 0.698
Traes_2BL_3A3353970 Triticum aestivum Traes_2BL_3A3353970 N 0.698
Traes_2BL_304012B04 Triticum aestivum Traes_2BL_304012B04 N 0.698
Traes_2AL_9E90C2488 Triticum aestivum Traes_2AL_9E90C2488 N 0.697
Pavir.Ib03413 Panicum virgatum Pavir.Ib03413 I 0.696
SapurV1A.0816s0060 Salix purpurea SapurV1A.0816s0060 I 0.696
TRIUR3_16508 Triticum urartu TRIUR3_16508 I 0.695
GLYMA03G31940 Glycine max GLYMA03G31940 I 0.695
Traes_4AS_9450AD3F4 Triticum aestivum Traes_4AS_9450AD3F4 I 0.695
BRADI4G38930 Brachypodium distachyon BRADI4G38930 I 0.695
MLOC_43207 Hordeum vulgare MLOC_43207 I 0.695
Gorai.001G252600 Gossypium raimondii Gorai.001G252600 I 0.695
GLYMA19G34696 Glycine max GLYMA19G34696 I 0.694
SapurV1A.3984s0010 Salix purpurea SapurV1A.3984s0010 I 0.693
GRMZM2G381441 Zea mays GRMZM2G381441 I 0.693
SapurV1A.0006s0840 Salix purpurea SapurV1A.0006s0840 I 0.693
Cucsa.388530 Cucumis sativus Cucsa.388530 I 0.693
Sb01g045040 Sorghum bicolor Sb01g045040 I 0.693
BRADI1G72450 Brachypodium distachyon BRADI1G72450 I 0.692
29900.m001561 Ricinus communis 29900.m001561 I 0.692
Si028135m.g Setaria italica Si028135m.g I 0.691
Pavir.Ha00304 Panicum virgatum Pavir.Ha00304 I 0.691
Si028219m.g Setaria italica Si028219m.g I 0.691
VIT_14s0081g00730 Vitis vinifera VIT_14s0081g00730 I 0.690
Eucgr.K03266 Eucalyptus grandis Eucgr.K03266 I 0.690
Si018024m.g Setaria italica Si018024m.g I 0.690
VIT_07s0005g03270 Vitis vinifera VIT_07s0005g03270 I 0.689
MDP0000668122 Malus domestica MDP0000668122 I 0.688
GSMUA_Achr11G22020_001 Musa acuminata GSMUA_Achr11G22020_001 I 0.687
GSMUA_Achr5G19610_001 Musa acuminata GSMUA_Achr5G19610_001 I 0.687
GRMZM2G016434 Zea mays GRMZM2G016434 I 0.687
Gorai.011G173000 Gossypium raimondii Gorai.011G173000 I 0.686
Eucgr.H03088 Eucalyptus grandis Eucgr.H03088 I 0.685
Sb05g026843 Sorghum bicolor Sb05g026843 I 0.684
SapurV1A.0826s0010 Salix purpurea SapurV1A.0826s0010 I 0.684
F775_22648 Aegilops tauschii F775_22648 N 0.684
VIT_07s0005g03260 Vitis vinifera VIT_07s0005g03260 I 0.684
GSMUA_Achr3G15550_001 Musa acuminata GSMUA_Achr3G15550_001 I 0.684
GSMUA_Achr10G09560_001 Musa acuminata GSMUA_Achr10G09560_001 I 0.684
VIT_07s0005g03230 Vitis vinifera VIT_07s0005g03230 I 0.684
OPUNC02G16450 Oryza punctata OPUNC02G16450 I 0.683
ONIVA02G20490 Oryza nivara ONIVA02G20490 I 0.683
Pavir.Aa02595 Panicum virgatum Pavir.Aa02595 I 0.683
ORUFI02G19470 Oryza rufipogon ORUFI02G19470 I 0.683
BGIOSGA006362 Oryza indica BGIOSGA006362 I 0.683
Sb04g021160 Sorghum bicolor Sb04g021160 I 0.683
Pavir.Bb00652 Panicum virgatum Pavir.Bb00652 I 0.682
LPERR02G14620 Leersia perrieri LPERR02G14620 I 0.681
e_gw1.60.113.1 Physcomitrella patens e_gw1.60.113.1 I 0.680
Gorai.001G253000 Gossypium raimondii Gorai.001G253000 I 0.680
OBART02G18470 Oryza barthii OBART02G18470 I 0.680
POPTR_0002s04010 Populus trichocarpa POPTR_0002s04010 I 0.679
SapurV1A.0132s0310 Salix purpurea SapurV1A.0132s0310 I 0.679
Traes_4BL_7EC2BFC7B Triticum aestivum Traes_4BL_7EC2BFC7B I 0.679
Lus10006796.g Linum usitatissimum Lus10006796.g I 0.679
Lus10005805.g Linum usitatissimum Lus10005805.g I 0.679
GSMUA_Achr4G12060_001 Musa acuminata GSMUA_Achr4G12060_001 I 0.678
Traes_4DS_9C01B536B Triticum aestivum Traes_4DS_9C01B536B I 0.677