BGIOSGA028781 (Oryza indica)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 BGIOSGA028781 T000672_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF017
M06568_2.00
Arabidopsis thaliana
NHNYCRCCGWCMWH

DWKGWCGGYGRNDN
Dap-seq
OMalley et al.(2016)
At1g19210_col_a
0.691 0.800
ERF017
M06569_2.00
Arabidopsis thaliana
NNNHNNCRCCGWCMW

WKGWCGGYGNNDNNN
Dap-seq
OMalley et al.(2016)
At1g19210_colamp_a
0.691 0.800
ERF018
M00842_2.00
Arabidopsis thaliana
HRCCGDCMN

NKGHCGGYD
PBM
Franco-Zorrilla et al.(2014)
ORA47
0.689 0.780
ERF018
M01610_2.00
Arabidopsis thaliana
NRCCGNCHN

NDGNCGGYN
PBM
Weirauch et al.(2014)
pTH7215
0.689 0.780
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGIOSGA028781-PA AP2 25 76

Links

Other AP2 family TFs
Other Oryza indica TFs

117 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_23111 Aegilops tauschii F775_23111 I 0.797
Aquca_076_00039 Aquilegia coerulea Aquca_076_00039 I 0.699
fgenesh2_kg.1__2098__AT1G19210.1 Arabidopsis lyrata fgenesh2_kg.1__2098__AT1G19210.1 I 0.691
ORA47 Arabidopsis lyrata fgenesh2_kg.2__1761__AT1G74930.1 I 0.689
ERF018 Arabidopsis thaliana AT1G74930 D 0.689
ERF017 Arabidopsis thaliana AT1G19210 D 0.691
Bostr.3288s0141 Boechera stricta Bostr.3288s0141 I 0.689
Bostr.7128s0526 Boechera stricta Bostr.7128s0526 I 0.678
BRADI3G37544 Brachypodium distachyon BRADI3G37544 I 0.800
Bo8g068370 Brassica oleracea Bo8g068370 I 0.705
Bo6g086740 Brassica oleracea Bo6g086740 I 0.682
Bo6g119120 Brassica oleracea Bo6g119120 I 0.686
Bo8g102870 Brassica oleracea Bo8g102870 I 0.694
Bra016518 Brassica rapa Bra016518 I 0.705
Bra003780 Brassica rapa Bra003780 I 0.682
Bra015882 Brassica rapa Bra015882 I 0.680
Bra031069 Brassica rapa Bra031069 I 0.694
Cagra.1961s0079 Capsella grandiflora Cagra.1961s0079 I 0.691
Cagra.0402s0035 Capsella grandiflora Cagra.0402s0035 I 0.682
Carubv10020965m.g Capsella rubella Carubv10020965m.g I 0.682
Carubv10011394m.g Capsella rubella Carubv10011394m.g I 0.691
evm.TU.supercontig_266.5 Carica papaya evm.TU.supercontig_266.5 I 0.688
Ca_09124 Cicer arietinum Ca_09124 I 0.677
Ca_01683 Cicer arietinum Ca_01683 I 0.688
Cla011318 Citrullus lanatus Cla011318 I 0.709
Cla007584 Citrullus lanatus Cla007584 I 0.678
Ciclev10009540m.g Citrus clementina Ciclev10009540m.g I 0.684
Ciclev10010348m.g Citrus clementina Ciclev10010348m.g I 0.698
orange1.1g029068m.g Citrus sinensis orange1.1g029068m.g I 0.684
Cucsa.141980 Cucumis sativus Cucsa.141980 I 0.709
Cucsa.271180 Cucumis sativus Cucsa.271180 I 0.679
Eucgr.C03297 Eucalyptus grandis Eucgr.C03297 I 0.686
Eucgr.C00780 Eucalyptus grandis Eucgr.C00780 I 0.699
Eucgr.C03175 Eucalyptus grandis Eucgr.C03175 I 0.752
Thhalv10009812m.g Eutrema salsugineum Thhalv10009812m.g I 0.689
gene12919-v1.0-hybrid Fragaria vesca gene12919-v1.0-hybrid I 0.688
GLYMA04G06095 Glycine max GLYMA04G06095 I 0.688
GLYMA06G06101 Glycine max GLYMA06G06101 I 0.688
GLYMA09G08330 Glycine max GLYMA09G08330 I 0.680
GLYMA15G19910 Glycine max GLYMA15G19910 I 0.680
Gorai.001G019100 Gossypium raimondii Gorai.001G019100 I 0.702
Gorai.010G091100 Gossypium raimondii Gorai.010G091100 I 0.709
Gorai.001G016800 Gossypium raimondii Gorai.001G016800 I 0.685
Gorai.004G285900 Gossypium raimondii Gorai.004G285900 I 0.687
LPERR08G14000 Leersia perrieri LPERR08G14000 I 0.809
Lus10038082.g Linum usitatissimum Lus10038082.g I 0.699
Lus10034885.g Linum usitatissimum Lus10034885.g I 0.693
Lus10009798.g Linum usitatissimum Lus10009798.g I 0.699
Lus10033420.g Linum usitatissimum Lus10033420.g I 0.693
chr5.CM0040.40.nd Lotus japonicus chr5.CM0040.40.nd I 0.677
MDP0000649022 Malus domestica MDP0000649022 I 0.688
cassava25057.valid.m1 Manihot esculenta cassava25057.valid.m1 I 0.699
cassava10604.m1 Manihot esculenta cassava10604.m1 I 0.686
cassava20547.m1 Manihot esculenta cassava20547.m1 I 0.677
MTR_1g014800 Medicago truncatula MTR_1g014800 I 0.680
MTR_3g105510 Medicago truncatula MTR_3g105510 I 0.740
MTR_3g105480 Medicago truncatula MTR_3g105480 I 0.740
mgf024162m Mimulus guttatus mgf024162m I 0.686
mgf021940m Mimulus guttatus mgf021940m I 0.682
GSMUA_Achr9G14360_001 Musa acuminata GSMUA_Achr9G14360_001 I 0.750
GSMUA_Achr5G05160_001 Musa acuminata GSMUA_Achr5G05160_001 I 0.742
GSMUA_AchrUn_randomG02200_001 Musa acuminata GSMUA_AchrUn_randomG02200_001 I 0.689
OBART06G06230 Oryza barthii OBART06G06230 N 0.681
OBART08G16950 Oryza barthii OBART08G16950 I 0.809
OBART06G06190 Oryza barthii OBART06G06190 I 0.698
OB08G24280 Oryza brachyantha OB08G24280 I 0.809
ORGLA02G0301600 Oryza glaberrima ORGLA02G0301600 I 0.685
ORGLA06G0057200 Oryza glaberrima ORGLA06G0057200 I 0.698
ORGLA06G0057400 Oryza glaberrima ORGLA06G0057400 N 0.681
OGLUM02G35980 Oryza glumaepatula OGLUM02G35980 I 0.685
OGLUM08G17690 Oryza glumaepatula OGLUM08G17690 I 0.809
OGLUM06G06520 Oryza glumaepatula OGLUM06G06520 I 0.698
OGLUM06G06550 Oryza glumaepatula OGLUM06G06550 N 0.684
BGIOSGA022471 Oryza indica BGIOSGA022471 I 0.696
BGIOSGA005486 Oryza indica BGIOSGA005486 I 0.685
OMERI01G37050 Oryza meridionalis OMERI01G37050 I 0.685
OMERI03G32210 Oryza meridionalis OMERI03G32210 I 0.698
ONIVA08G18470 Oryza nivara ONIVA08G18470 I 0.809
ONIVA06G07190 Oryza nivara ONIVA06G07190 I 0.698
ONIVA02G36910 Oryza nivara ONIVA02G36910 I 0.685
OPUNC02G32160 Oryza punctata OPUNC02G32160 I 0.685
OPUNC08G14840 Oryza punctata OPUNC08G14840 I 0.809
ORUFI02G36340 Oryza rufipogon ORUFI02G36340 I 0.685
ORUFI08G18850 Oryza rufipogon ORUFI08G18850 I 0.809
ORUFI06G06480 Oryza rufipogon ORUFI06G06480 I 0.696
OS02G0781300 Oryza sativa OS02G0781300 I 0.685
OS08G0454000 Oryza sativa OS08G0454000 I 0.809
Pavir.J00593 Panicum virgatum Pavir.J00593 I 0.707
Pavir.Fb01602 Panicum virgatum Pavir.Fb01602 I 0.809
Pavir.Aa00296 Panicum virgatum Pavir.Aa00296 I 0.705
Pavir.Fa00741 Panicum virgatum Pavir.Fa00741 I 0.809
POPTR_0018s08320 Populus trichocarpa POPTR_0018s08320 I 0.677
POPTR_0006s14090 Populus trichocarpa POPTR_0006s14090 I 0.695
POPTR_0006s14100 Populus trichocarpa POPTR_0006s14100 I 0.699
POPTR_0006s23480 Populus trichocarpa POPTR_0006s23480 I 0.693
Pm027117 Prunus mume Pm027117 I 0.699
PRUPE_ppa011336mg Prunus persica PRUPE_ppa011336mg I 0.699
29739.m003647 Ricinus communis 29739.m003647 I 0.683
29739.m003716 Ricinus communis 29739.m003716 I 0.699
SapurV1A.2229s0010 Salix purpurea SapurV1A.2229s0010 I 0.693
SapurV1A.0057s0300 Salix purpurea SapurV1A.0057s0300 I 0.687
SapurV1A.0373s0040 Salix purpurea SapurV1A.0373s0040 I 0.693
SapurV1A.0521s0050 Salix purpurea SapurV1A.0521s0050 I 0.691
Si019636m.g Setaria italica Si019636m.g I 0.705
Si015027m.g Setaria italica Si015027m.g I 0.809
Si008104m.g Setaria italica Si008104m.g I 0.739
Solyc06g054630.1 Solanum lycopersicum Solyc06g054630.1 I 0.736
PGSC0003DMG400030781 Solanum tuberosum PGSC0003DMG400030781 I 0.736
Sb07g022265 Sorghum bicolor Sb07g022265 I 0.764
TCM_037415 Theobroma cacao TCM_037415 I 0.699
TCM_037486 Theobroma cacao TCM_037486 I 0.698
TRAES3BF084200010CFD_g Triticum aestivum TRAES3BF084200010CFD_g I 0.799
Traes_6DL_FA861D610 Triticum aestivum Traes_6DL_FA861D610 I 0.706
VIT_11s0016g00660 Vitis vinifera VIT_11s0016g00660 I 0.697
ORA47 Vitis vinifera VIT_04s0008g02230 I 0.688
GRMZM2G163745 Zea mays GRMZM2G163745 I 0.809
GRMZM2G097081 Zea mays GRMZM2G097081 I 0.700