BGIOSGA032849 (Oryza indica)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 BGIOSGA032849 T000692_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAP2-12
M01046_2.00 		Arabidopsis thaliana
RSMGBMNNNN
NNNNKVCKSY		 PBM
Sullivan et al.(2014)
pTH7359 		0.685 0.755
RAP2-12
M06588_2.00 		Arabidopsis thaliana
NHDCCGCCGCCRHHDHNNNHN
NDNNNDHDDYGGCGGCGGHDN		 Dap-seq
OMalley et al.(2016)
RAP212_col_a 		0.685 0.755
ERF091
M06638_2.00 		Arabidopsis thaliana
NNHNYHDCCGCCGCCRY
RYGGCGGCGGHDRNDNN		 Dap-seq
OMalley et al.(2016)
AT4G18450_col_a 		0.684 0.776
HRE1
M06595_2.00 		Arabidopsis thaliana
NHNBMDCCGCCGCCRYHDHHN
NDDHDRYGGCGGCGGHKVNDN		 Dap-seq
OMalley et al.(2016)
ERF73_col_a 		0.684 0.735
HRE1
M06596_2.00 		Arabidopsis thaliana
HNYHDMHNYCDCCGCCGCCRY
RYGGCGGCGGHGRNDKHDRND		 Dap-seq
OMalley et al.(2016)
ERF73_colamp_a 		0.684 0.735
ERF4
M01616_2.00 		Arabidopsis thaliana
VCGCCGCC
GGCGGCGB		 PBM
Weirauch et al.(2014)
pTH8156 		0.679 0.755
ERF4
M06616_2.00 		Arabidopsis thaliana
YCDCCGCCGCCRHHD
HDDYGGCGGCGGHGR		 Dap-seq
OMalley et al.(2016)
ERF4_col_a 		0.679 0.755
ERF4
M06617_2.00 		Arabidopsis thaliana
NHNNHNSCGCCGYCRHHDNN
NNHDDYGRCGGCGSNDNNDN		 Dap-seq
OMalley et al.(2016)
ERF4_colamp_a 		0.679 0.755
ERF8
M01608_2.00 		Arabidopsis thaliana
MGCCGNMNNN
NNNKNCGGCK		 PBM
Weirauch et al.(2014)
pTH8095 		0.677 0.735
ERF8
M06586_2.00 		Arabidopsis thaliana
NYHDYCKCCGCCGYH
DRCGGCGGMGRHDRN		 Dap-seq
OMalley et al.(2016)
ERF8_col_a 		0.677 0.735
ERF8
M06587_2.00 		Arabidopsis thaliana
HNNHDSCGCCGYCRHHDN
NHDDYGRCGGCGSHDNND		 Dap-seq
OMalley et al.(2016)
ERF8_colamp_a 		0.677 0.735
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGIOSGA032849-PA AP2 92 143

Links

Other AP2 family TFs
Other Oryza indica TFs

255 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OGLUM10G08400 Oryza glumaepatula OGLUM10G08400 I 0.822
OMERI10G05820 Oryza meridionalis OMERI10G05820 I 0.822
OS10G0390800 Oryza sativa OS10G0390800 I 0.822
ORUFI10G09060 Oryza rufipogon ORUFI10G09060 I 0.822
ONIVA10G08250 Oryza nivara ONIVA10G08250 I 0.822
ORGLA10G0072500 Oryza glaberrima ORGLA10G0072500 I 0.822
Pavir.Ib02796 Panicum virgatum Pavir.Ib02796 I 0.766
ORGLA01G0108600 Oryza glaberrima ORGLA01G0108600 I 0.721
BRADI2G11890 Brachypodium distachyon BRADI2G11890 I 0.721
GRMZM2G053503 Zea mays GRMZM2G053503 I 0.721
TRAES3BF171600010CFD_g Triticum aestivum TRAES3BF171600010CFD_g I 0.721
Si002845m.g Setaria italica Si002845m.g I 0.721
Traes_5BL_98D063967 Triticum aestivum Traes_5BL_98D063967 I 0.721
Traes_5DL_41E3B1B23 Triticum aestivum Traes_5DL_41E3B1B23 I 0.721
GRMZM2G169382 Zea mays GRMZM2G169382 I 0.721
Sb03g012890 Sorghum bicolor Sb03g012890 I 0.721
OS01G0313300 Oryza sativa OS01G0313300 I 0.721
Pavir.J08480 Panicum virgatum Pavir.J08480 I 0.721
OMERI12G11270 Oryza meridionalis OMERI12G11270 I 0.721
Pavir.Eb02324 Panicum virgatum Pavir.Eb02324 I 0.721
BGIOSGA003364 Oryza indica BGIOSGA003364 I 0.721
OPUNC01G12900 Oryza punctata OPUNC01G12900 I 0.721
Pavir.Fa01730 Panicum virgatum Pavir.Fa01730 I 0.716
Solyc12g049560.1 Solanum lycopersicum Solyc12g049560.1 I 0.715
PGSC0003DMG400028853 Solanum tuberosum PGSC0003DMG400028853 I 0.715
LPERR03G05410 Leersia perrieri LPERR03G05410 N 0.714
Sb07g006210 Sorghum bicolor Sb07g006210 I 0.713
Pavir.Fb01486 Panicum virgatum Pavir.Fb01486 I 0.713
Sb07g006195 Sorghum bicolor Sb07g006195 I 0.713
Sb07g006200 Sorghum bicolor Sb07g006200 I 0.713
Sb07g006190 Sorghum bicolor Sb07g006190 I 0.713
GRMZM2G020054 Zea mays GRMZM2G020054 I 0.713
Pavir.Fb00952 Panicum virgatum Pavir.Fb00952 I 0.713
Si014469m.g Setaria italica Si014469m.g I 0.706
GRMZM2G089995 Zea mays GRMZM2G089995 I 0.706
Gorai.007G280900 Gossypium raimondii Gorai.007G280900 I 0.704
Gorai.007G280800 Gossypium raimondii Gorai.007G280800 I 0.704
Sb04g035160 Sorghum bicolor Sb04g035160 I 0.702
GSMUA_Achr10G31090_001 Musa acuminata GSMUA_Achr10G31090_001 I 0.700
GRMZM2G328197 Zea mays GRMZM2G328197 I 0.698
Pavir.J13096 Panicum virgatum Pavir.J13096 I 0.698
Si036118m.g Setaria italica Si036118m.g I 0.697
GRMZM2G148333 Zea mays GRMZM2G148333 I 0.697
AC206951.3_FG017 Zea mays AC206951.3_FG017 I 0.696
Pavir.Db02131 Panicum virgatum Pavir.Db02131 I 0.696
BRADI5G25570 Brachypodium distachyon BRADI5G25570 I 0.695
Pavir.Ib00527 Panicum virgatum Pavir.Ib00527 N 0.695
POPTR_0011s11620 Populus trichocarpa POPTR_0011s11620 I 0.694
GRMZM2G429378 Zea mays GRMZM2G429378 I 0.694
SapurV1A.1325s0040 Salix purpurea SapurV1A.1325s0040 I 0.694
POPTR_0001s40770 Populus trichocarpa POPTR_0001s40770 I 0.694
Gorai.002G067600 Gossypium raimondii Gorai.002G067600 I 0.693
TCM_031608 Theobroma cacao TCM_031608 I 0.693
Ciclev10009484m.g Citrus clementina Ciclev10009484m.g I 0.693
evm.TU.supercontig_131.83 Carica papaya evm.TU.supercontig_131.83 I 0.693
GLYMA12G26836 Glycine max GLYMA12G26836 I 0.693
Bra039658 Brassica rapa Bra039658 I 0.693
orange1.1g028454m.g Citrus sinensis orange1.1g028454m.g I 0.693
27904.m000217 Ricinus communis 27904.m000217 I 0.693
Gorai.009G375700 Gossypium raimondii Gorai.009G375700 I 0.693
Pavir.Fa01728 Panicum virgatum Pavir.Fa01728 I 0.692
MTR_3g053690 Medicago truncatula MTR_3g053690 I 0.692
Bostr.10273s0115 Boechera stricta Bostr.10273s0115 I 0.692
Cagra.1013s0062 Capsella grandiflora Cagra.1013s0062 I 0.692
Pavir.Fb00951 Panicum virgatum Pavir.Fb00951 I 0.692
Ca_20544 Cicer arietinum Ca_20544 I 0.692
Thhalv10018945m.g Eutrema salsugineum Thhalv10018945m.g I 0.692
Carubv10020812m.g Capsella rubella Carubv10020812m.g I 0.692
Ca_22534 Cicer arietinum Ca_22534 I 0.691
GLYMA08G43300 Glycine max GLYMA08G43300 I 0.691
Traes_4BL_7EC2BFC7B Triticum aestivum Traes_4BL_7EC2BFC7B I 0.691
Traes_4AS_8A64DBE8E Triticum aestivum Traes_4AS_8A64DBE8E I 0.691
cassava37846.valid.m1 Manihot esculenta cassava37846.valid.m1 I 0.690
Solyc07g049490.1 Solanum lycopersicum Solyc07g049490.1 I 0.690
Aquca_076_00008 Aquilegia coerulea Aquca_076_00008 I 0.690
GLYMA18G10290 Glycine max GLYMA18G10290 I 0.690
Cucsa.122930 Cucumis sativus Cucsa.122930 I 0.689
Sb02g042760 Sorghum bicolor Sb02g042760 I 0.689
GRMZM2G025062 Zea mays GRMZM2G025062 I 0.689
Aquca_023_00168 Aquilegia coerulea Aquca_023_00168 I 0.689
VIT_19s0014g02240 Vitis vinifera VIT_19s0014g02240 I 0.689
ORGLA02G0063000 Oryza glaberrima ORGLA02G0063000 I 0.688
Bra021594 Brassica rapa Bra021594 I 0.688
Bra001588 Brassica rapa Bra001588 I 0.688
AMTR_s00017p00232330 Amborella trichopoda AMTR_s00017p00232330 I 0.688
Bo3g066710 Brassica oleracea Bo3g066710 I 0.688
orange1.1g020391m.g Citrus sinensis orange1.1g020391m.g I 0.688
ORUFI02G06880 Oryza rufipogon ORUFI02G06880 I 0.688
Bostr.28625s0184 Boechera stricta Bostr.28625s0184 I 0.688
OGLUM02G06860 Oryza glumaepatula OGLUM02G06860 I 0.688
cassava42230.valid.m1 Manihot esculenta cassava42230.valid.m1 I 0.688
Ciclev10025816m.g Citrus clementina Ciclev10025816m.g I 0.688
cassava42231.valid.m1 Manihot esculenta cassava42231.valid.m1 I 0.688
Gorai.007G312200 Gossypium raimondii Gorai.007G312200 I 0.688
OMERI02G07840 Oryza meridionalis OMERI02G07840 I 0.688
ONIVA04G27460 Oryza nivara ONIVA04G27460 I 0.687
Thhalv10011796m.g Eutrema salsugineum Thhalv10011796m.g I 0.687
ORUFI04G30650 Oryza rufipogon ORUFI04G30650 I 0.687
OS04G0669200 Oryza sativa OS04G0669200 I 0.687
OGLUM04G28860 Oryza glumaepatula OGLUM04G28860 I 0.687
Bra030957 Brassica rapa Bra030957 I 0.687
OMERI04G24480 Oryza meridionalis OMERI04G24480 I 0.687
BGIOSGA014134 Oryza indica BGIOSGA014134 I 0.687
Pavir.Ba00136 Panicum virgatum Pavir.Ba00136 I 0.686
Pavir.Bb03609 Panicum virgatum Pavir.Bb03609 I 0.686
Bo1g129710 Brassica oleracea Bo1g129710 I 0.686
OS07G0674800 Oryza sativa OS07G0674800 N 0.686
Si023330m.g Setaria italica Si023330m.g I 0.686
OBART07G26160 Oryza barthii OBART07G26160 N 0.686
Si031079m.g Setaria italica Si031079m.g I 0.686
GSMUA_Achr10G19950_001 Musa acuminata GSMUA_Achr10G19950_001 I 0.686
ORGLA07G0205000 Oryza glaberrima ORGLA07G0205000 N 0.686
OGLUM07G26170 Oryza glumaepatula OGLUM07G26170 N 0.686
ORUFI07G27120 Oryza rufipogon ORUFI07G27120 N 0.686
ONIVA07G25780 Oryza nivara ONIVA07G25780 N 0.686
BGIOSGA023726 Oryza indica BGIOSGA023726 N 0.686
OPUNC07G24590 Oryza punctata OPUNC07G24590 N 0.686
Thhalv10003431m.g Eutrema salsugineum Thhalv10003431m.g I 0.686
Pavir.Ga00187 Panicum virgatum Pavir.Ga00187 I 0.686
Pavir.Gb00092 Panicum virgatum Pavir.Gb00092 I 0.686
OMERI07G22780 Oryza meridionalis OMERI07G22780 N 0.686
SapurV1A.1244s0010 Salix purpurea SapurV1A.1244s0010 I 0.685
RAP2-12 Arabidopsis thaliana AT1G53910 D 0.685
GRMZM2G018984 Zea mays GRMZM2G018984 I 0.685
GSMUA_Achr6G18020_001 Musa acuminata GSMUA_Achr6G18020_001 I 0.685
PGSC0003DMG400000681 Solanum tuberosum PGSC0003DMG400000681 I 0.685
Cagra.0769s0008 Capsella grandiflora Cagra.0769s0008 I 0.685
SELMODRAFT_73164 Selaginella moellendorffii SELMODRAFT_73164 I 0.685
SELMODRAFT_73134 Selaginella moellendorffii SELMODRAFT_73134 I 0.685
SELMODRAFT_17703 Selaginella moellendorffii SELMODRAFT_17703 I 0.685
RAP2.12 Arabidopsis lyrata scaffold_105235.1 I 0.685
SELMODRAFT_73169 Selaginella moellendorffii SELMODRAFT_73169 I 0.685
Carubv10009538m.g Capsella rubella Carubv10009538m.g I 0.685
Bostr.7128s0090 Boechera stricta Bostr.7128s0090 I 0.685
Eucgr.F01164 Eucalyptus grandis Eucgr.F01164 I 0.685
Thhalv10011606m.g Eutrema salsugineum Thhalv10011606m.g I 0.685
Si030514m.g Setaria italica Si030514m.g I 0.684
GLYMA12G35550 Glycine max GLYMA12G35550 I 0.684
Pavir.Aa03102 Panicum virgatum Pavir.Aa03102 I 0.684
Pavir.Ab00660 Panicum virgatum Pavir.Ab00660 I 0.684
ERF091 Arabidopsis thaliana AT4G18450 D 0.684
BRADI3G06562 Brachypodium distachyon BRADI3G06562 I 0.684
GLYMA13G34920 Glycine max GLYMA13G34920 I 0.684
HRE1 Arabidopsis thaliana AT1G72360 D 0.684
GRMZM2G079653 Zea mays GRMZM2G079653 I 0.684
GRMZM2G146028 Zea mays GRMZM2G146028 I 0.684
ORUFI03G05920 Oryza rufipogon ORUFI03G05920 N 0.684
ONIVA03G06100 Oryza nivara ONIVA03G06100 N 0.684
ORGLA03G0058800 Oryza glaberrima ORGLA03G0058800 N 0.684
Sb04g006080 Sorghum bicolor Sb04g006080 I 0.684
OGLUM03G06090 Oryza glumaepatula OGLUM03G06090 N 0.684
OB07G27820 Oryza brachyantha OB07G27820 I 0.684
GLYMA02G46340 Glycine max GLYMA02G46340 I 0.683
GSMUA_Achr9G11480_001 Musa acuminata GSMUA_Achr9G11480_001 I 0.683
Eucgr.K00734 Eucalyptus grandis Eucgr.K00734 I 0.683
Bo7g048170 Brassica oleracea Bo7g048170 I 0.683
Si014474m.g Setaria italica Si014474m.g I 0.683
LjT01F24.60.nd Lotus japonicus LjT01F24.60.nd I 0.683
Bra030095 Brassica rapa Bra030095 I 0.683
chr1.CM0442.200.nd Lotus japonicus chr1.CM0442.200.nd I 0.683
ONIVA03G17860 Oryza nivara ONIVA03G17860 N 0.682
OS03G0341000 Oryza sativa OS03G0341000 N 0.682
BGIOSGA012597 Oryza indica BGIOSGA012597 N 0.682
Pavir.J12680 Panicum virgatum Pavir.J12680 N 0.682
OGLUM03G17210 Oryza glumaepatula OGLUM03G17210 N 0.682
Bo3g074840 Brassica oleracea Bo3g074840 I 0.682
Bra001784 Brassica rapa Bra001784 I 0.682
ORUFI03G17430 Oryza rufipogon ORUFI03G17430 N 0.682
OMERI03G15020 Oryza meridionalis OMERI03G15020 N 0.682
TRIUR3_20682 Triticum urartu TRIUR3_20682 I 0.682
MLOC_38561 Hordeum vulgare MLOC_38561 I 0.682
F775_30714 Aegilops tauschii F775_30714 I 0.682
ORGLA03G0161100 Oryza glaberrima ORGLA03G0161100 N 0.682
Pm011391 Prunus mume Pm011391 I 0.682
Traes_5AL_14D9A9844 Triticum aestivum Traes_5AL_14D9A9844 I 0.682
GSMUA_Achr9G05260_001 Musa acuminata GSMUA_Achr9G05260_001 I 0.682
Traes_5BL_7F84602F3 Triticum aestivum Traes_5BL_7F84602F3 I 0.682
OPUNC03G16250 Oryza punctata OPUNC03G16250 N 0.682
Si036615m.g Setaria italica Si036615m.g I 0.682
PRUPE_ppa010982mg Prunus persica PRUPE_ppa010982mg I 0.682
LPERR02G05920 Leersia perrieri LPERR02G05920 I 0.682
Sb01g045050 Sorghum bicolor Sb01g045050 N 0.682
OPUNC02G05940 Oryza punctata OPUNC02G05940 I 0.682
LPERR03G14670 Leersia perrieri LPERR03G14670 N 0.682
Traes_5DL_26F3B188A Triticum aestivum Traes_5DL_26F3B188A I 0.682
Thhalv10021393m.g Eutrema salsugineum Thhalv10021393m.g I 0.682
Carubv10014552m.g Capsella rubella Carubv10014552m.g I 0.681
Thhalv10021456m.g Eutrema salsugineum Thhalv10021456m.g I 0.681
TRIUR3_28710 Triticum urartu TRIUR3_28710 I 0.681
Bra036016 Brassica rapa Bra036016 I 0.681
GLYMA15G16260 Glycine max GLYMA15G16260 I 0.681
Bo2g122260 Brassica oleracea Bo2g122260 I 0.681
mgf009667m Mimulus guttatus mgf009667m I 0.681
Bo3g184310 Brassica oleracea Bo3g184310 I 0.681
mgf010035m Mimulus guttatus mgf010035m I 0.681
SapurV1A.4312s0010 Salix purpurea SapurV1A.4312s0010 I 0.680
GSMUA_Achr1G25890_001 Musa acuminata GSMUA_Achr1G25890_001 I 0.680
GRMZM2G114820 Zea mays GRMZM2G114820 I 0.680
SapurV1A.0233s0360 Salix purpurea SapurV1A.0233s0360 I 0.680
Cucsa.101370 Cucumis sativus Cucsa.101370 I 0.680
POPTR_0005s24470 Populus trichocarpa POPTR_0005s24470 I 0.680
GLYMA06G35710 Glycine max GLYMA06G35710 I 0.680
ERF4 Arabidopsis thaliana AT3G15210 D 0.679
Pavir.Bb02257 Panicum virgatum Pavir.Bb02257 I 0.679
SapurV1A.0207s0200 Salix purpurea SapurV1A.0207s0200 I 0.679
Pavir.J17283 Panicum virgatum Pavir.J17283 I 0.679
PDK_20s1440861g004 Phoenix dactylifera PDK_20s1440861g004 I 0.679
BGIOSGA030816 Oryza indica BGIOSGA030816 I 0.679
ONIVA09G11170 Oryza nivara ONIVA09G11170 I 0.679
Pavir.J01991 Panicum virgatum Pavir.J01991 I 0.679
OPUNC09G09870 Oryza punctata OPUNC09G09870 I 0.679
Pavir.Fb01507 Panicum virgatum Pavir.Fb01507 I 0.679
ORGLA09G0085500 Oryza glaberrima ORGLA09G0085500 I 0.679
OMERI09G08870 Oryza meridionalis OMERI09G08870 I 0.679
Carubv10011371m.g Capsella rubella Carubv10011371m.g I 0.679
Si030088m.g Setaria italica Si030088m.g I 0.679
Cagra.0897s0005 Capsella grandiflora Cagra.0897s0005 I 0.679
OGLUM09G11780 Oryza glumaepatula OGLUM09G11780 I 0.679
OS09G0434500 Oryza sativa OS09G0434500 I 0.679
Sb02g025530 Sorghum bicolor Sb02g025530 I 0.679
GRMZM2G125460 Zea mays GRMZM2G125460 N 0.679
GLYMA14G02360 Glycine max GLYMA14G02360 I 0.679
LPERR09G08060 Leersia perrieri LPERR09G08060 I 0.679
OBART09G11390 Oryza barthii OBART09G11390 I 0.679
ATERF-8 Arabidopsis lyrata fgenesh2_kg.1__4394__AT1G53170.1 I 0.679
ATERF-4 Arabidopsis lyrata scaffold_301765.1 I 0.679
MTR_2g078680 Medicago truncatula MTR_2g078680 I 0.679
ORUFI09G12180 Oryza rufipogon ORUFI09G12180 I 0.679
OB09G17960 Oryza brachyantha OB09G17960 I 0.679
BRADI4G31040 Brachypodium distachyon BRADI4G31040 I 0.679
OLONG_007389 Oryza longistaminata OLONG_007389 I 0.679
GRMZM2G175525 Zea mays GRMZM2G175525 I 0.678
Pavir.J34139 Panicum virgatum Pavir.J34139 I 0.678
OGLUM03G06060 Oryza glumaepatula OGLUM03G06060 I 0.678
LPERR03G05400 Leersia perrieri LPERR03G05400 I 0.678
OBART03G06060 Oryza barthii OBART03G06060 I 0.678
Pavir.J26885 Panicum virgatum Pavir.J26885 I 0.678
ONIVA03G06080 Oryza nivara ONIVA03G06080 I 0.678
GSMUA_Achr11G15810_001 Musa acuminata GSMUA_Achr11G15810_001 I 0.678
Cucsa.126880 Cucumis sativus Cucsa.126880 I 0.678
ORGLA03G0058500 Oryza glaberrima ORGLA03G0058500 I 0.678
OMERI03G05890 Oryza meridionalis OMERI03G05890 I 0.678
ORUFI03G05890 Oryza rufipogon ORUFI03G05890 I 0.678
MDP0000324718 Malus domestica MDP0000324718 I 0.678
Pavir.Ib00526 Panicum virgatum Pavir.Ib00526 I 0.678
OS03G0183000 Oryza sativa OS03G0183000 I 0.678
BGIOSGA011328 Oryza indica BGIOSGA011328 I 0.678
GRMZM2G050851 Zea mays GRMZM2G050851 I 0.678
Bra027270 Brassica rapa Bra027270 I 0.677
Cla023722 Citrullus lanatus Cla023722 I 0.677
Bo5g127380 Brassica oleracea Bo5g127380 I 0.677
Carubv10010374m.g Capsella rubella Carubv10010374m.g I 0.677
GRMZM2G151542 Zea mays GRMZM2G151542 I 0.677
Cagra.1472s0014 Capsella grandiflora Cagra.1472s0014 I 0.677
ERF8 Arabidopsis thaliana AT1G53170 D 0.677