BGIOSGA037681 (Oryza indica)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 BGIOSGA037681 T000702_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RAP2-11
M06665_2.00
Arabidopsis thaliana
NNNYHDYYGCCGBCN

NGVCGGCRRHDRNNN
Dap-seq
OMalley et al.(2016)
RAP211_col_a
0.796 0.863
RAP2-11
M06666_2.00
Arabidopsis thaliana
HNNNGCCGGCSDNND

HNNHSGCCGGCNNND
Dap-seq
OMalley et al.(2016)
RAP211_colamp_a
0.796 0.863
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGIOSGA037681-PA AP2 44 95

Links

Other AP2 family TFs
Other Oryza indica TFs

269 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29635.m000461 Ricinus communis 29635.m000461 I 0.823
29813.m001543 Ricinus communis 29813.m001543 I 0.822
30068.m002623 Ricinus communis 30068.m002623 I 0.703
30084.m000185 Ricinus communis 30084.m000185 I 0.796
30174.m008961 Ricinus communis 30174.m008961 I 0.740
30174.m009031 Ricinus communis 30174.m009031 I 0.735
AMTR_s00003p00165930 Amborella trichopoda AMTR_s00003p00165930 I 0.688
AMTR_s00006p00266920 Amborella trichopoda AMTR_s00006p00266920 I 0.721
AMTR_s00058p00066390 Amborella trichopoda AMTR_s00058p00066390 I 0.785
AMTR_s00068p00102110 Amborella trichopoda AMTR_s00068p00102110 I 0.793
AMTR_s00069p00132820 Amborella trichopoda AMTR_s00069p00132820 I 0.745
Aquca_002_00706 Aquilegia coerulea Aquca_002_00706 I 0.815
Aquca_004_00669 Aquilegia coerulea Aquca_004_00669 I 0.792
Aquca_013_00424 Aquilegia coerulea Aquca_013_00424 I 0.699
Aquca_026_00181 Aquilegia coerulea Aquca_026_00181 I 0.718
RAP2-11 Arabidopsis thaliana AT5G19790 D 0.796
BGIOSGA024035 Oryza indica BGIOSGA024035 I 0.687
BGIOSGA025360 Oryza indica BGIOSGA025360 I 0.796
BGIOSGA031114 Oryza indica BGIOSGA031114 I 0.748
Bo2g018360 Brassica oleracea Bo2g018360 I 0.796
Bo3g013830 Brassica oleracea Bo3g013830 I 0.796
Bo9g152440 Brassica oleracea Bo9g152440 I 0.796
Bostr.26527s0221 Boechera stricta Bostr.26527s0221 I 0.796
Bra002262 Brassica rapa Bra002262 I 0.796
Bra006518 Brassica rapa Bra006518 I 0.796
Bra020063 Brassica rapa Bra020063 I 0.796
BRADI1G23756 Brachypodium distachyon BRADI1G23756 I 0.693
BRADI1G54450 Brachypodium distachyon BRADI1G54450 I 0.745
Cagra.1268s0022 Capsella grandiflora Cagra.1268s0022 I 0.796
Carubv10002733m.g Capsella rubella Carubv10002733m.g I 0.796
cassava1773.valid.m1 Manihot esculenta cassava1773.valid.m1 I 0.820
cassava23953.valid.m1 Manihot esculenta cassava23953.valid.m1 I 0.789
cassava28630.m1 Manihot esculenta cassava28630.m1 I 0.727
cassava40212.m1 Manihot esculenta cassava40212.m1 I 0.744
cassava4119.m1 Manihot esculenta cassava4119.m1 I 0.735
cassava4189.m1 Manihot esculenta cassava4189.m1 I 0.822
cassava4942.m1 Manihot esculenta cassava4942.m1 I 0.819
cassava9290.m1 Manihot esculenta cassava9290.m1 I 0.809
cassava9303.m1 Manihot esculenta cassava9303.m1 I 0.747
cassava9887.m1 Manihot esculenta cassava9887.m1 I 0.714
Ca_00417 Cicer arietinum Ca_00417 I 0.723
Ca_08232 Cicer arietinum Ca_08232 I 0.796
Ca_10494 Cicer arietinum Ca_10494 I 0.823
Ca_16397 Cicer arietinum Ca_16397 I 0.723
Ca_25424 Cicer arietinum Ca_25424 I 0.734
chr1.CM0371.120.nc Lotus japonicus chr1.CM0371.120.nc I 0.796
Ciclev10013796m.g Citrus clementina Ciclev10013796m.g I 0.823
Ciclev10021611m.g Citrus clementina Ciclev10021611m.g I 0.783
Ciclev10022187m.g Citrus clementina Ciclev10022187m.g N 0.694
Ciclev10023360m.g Citrus clementina Ciclev10023360m.g I 0.714
Ciclev10023764m.g Citrus clementina Ciclev10023764m.g I 0.744
Ciclev10024614m.g Citrus clementina Ciclev10024614m.g N 0.691
Ciclev10033847m.g Citrus clementina Ciclev10033847m.g I 0.822
Cla005054 Citrullus lanatus Cla005054 N 0.684
Cla010474 Citrullus lanatus Cla010474 I 0.820
Cla012318 Citrullus lanatus Cla012318 I 0.783
Cla021590 Citrullus lanatus Cla021590 I 0.750
Cucsa.152770 Cucumis sativus Cucsa.152770 I 0.732
Cucsa.158080 Cucumis sativus Cucsa.158080 I 0.820
Cucsa.193280 Cucumis sativus Cucsa.193280 N 0.684
Cucsa.258020 Cucumis sativus Cucsa.258020 I 0.750
Cucsa.334870 Cucumis sativus Cucsa.334870 I 0.783
Eucgr.A02109 Eucalyptus grandis Eucgr.A02109 I 0.788
Eucgr.B00666 Eucalyptus grandis Eucgr.B00666 I 0.695
Eucgr.B03605 Eucalyptus grandis Eucgr.B03605 I 0.808
Eucgr.I02007 Eucalyptus grandis Eucgr.I02007 I 0.806
evm.TU.supercontig_14.126 Carica papaya evm.TU.supercontig_14.126 I 0.823
evm.TU.supercontig_18.194 Carica papaya evm.TU.supercontig_18.194 I 0.727
evm.TU.supercontig_51.136 Carica papaya evm.TU.supercontig_51.136 I 0.796
evm.TU.supercontig_62.63 Carica papaya evm.TU.supercontig_62.63 I 0.706
e_gw1.195.59.1 Physcomitrella patens e_gw1.195.59.1 N 0.682
e_gw1.233.44.1 Physcomitrella patens e_gw1.233.44.1 I 0.689
e_gw1.64.98.1 Physcomitrella patens e_gw1.64.98.1 I 0.689
F775_02727 Aegilops tauschii F775_02727 I 0.823
F775_04303 Aegilops tauschii F775_04303 I 0.785
gene01844-v1.0-hybrid Fragaria vesca gene01844-v1.0-hybrid N 0.682
gene04400-v1.0-hybrid Fragaria vesca gene04400-v1.0-hybrid I 0.823
gene16598-v1.0-hybrid Fragaria vesca gene16598-v1.0-hybrid I 0.793
gene16905-v1.0-hybrid Fragaria vesca gene16905-v1.0-hybrid I 0.744
gene24824-v1.0-hybrid Fragaria vesca gene24824-v1.0-hybrid I 0.781
GLYMA02G08020 Glycine max GLYMA02G08020 I 0.699
GLYMA03G01931 Glycine max GLYMA03G01931 I 0.723
GLYMA05G07690 Glycine max GLYMA05G07690 I 0.681
GLYMA07G08542 Glycine max GLYMA07G08542 I 0.723
GLYMA13G05690 Glycine max GLYMA13G05690 I 0.819
GLYMA15G09190 Glycine max GLYMA15G09190 N 0.677
GLYMA16G04410 Glycine max GLYMA16G04410 I 0.796
GLYMA16G27040 Glycine max GLYMA16G27040 I 0.699
GLYMA17G13320 Glycine max GLYMA17G13320 I 0.681
GLYMA18G49761 Glycine max GLYMA18G49761 I 0.814
GLYMA19G03120 Glycine max GLYMA19G03120 I 0.823
GLYMA19G03165 Glycine max GLYMA19G03165 I 0.823
GLYMA19G29000 Glycine max GLYMA19G29000 I 0.796
Gorai.004G127900 Gossypium raimondii Gorai.004G127900 N 0.681
Gorai.006G013600 Gossypium raimondii Gorai.006G013600 I 0.823
Gorai.007G260900 Gossypium raimondii Gorai.007G260900 I 0.733
Gorai.008G116800 Gossypium raimondii Gorai.008G116800 I 0.744
Gorai.008G178900 Gossypium raimondii Gorai.008G178900 I 0.786
Gorai.008G261800 Gossypium raimondii Gorai.008G261800 I 0.714
Gorai.013G115000 Gossypium raimondii Gorai.013G115000 I 0.749
Gorai.013G244500 Gossypium raimondii Gorai.013G244500 I 0.796
GRMZM2G010100 Zea mays GRMZM2G010100 I 0.820
GRMZM2G011236 Zea mays GRMZM2G011236 I 0.686
GRMZM2G018138 Zea mays GRMZM2G018138 I 0.739
GRMZM2G019443 Zea mays GRMZM2G019443 I 0.730
GRMZM2G039112 Zea mays GRMZM2G039112 I 0.823
GRMZM2G384386 Zea mays GRMZM2G384386 I 0.685
GSMUA_Achr3G12350_001 Musa acuminata GSMUA_Achr3G12350_001 I 0.728
GSMUA_Achr4G28070_001 Musa acuminata GSMUA_Achr4G28070_001 I 0.823
GSMUA_Achr4G28640_001 Musa acuminata GSMUA_Achr4G28640_001 I 0.796
LjT06B04.30.nd Lotus japonicus LjT06B04.30.nd N 0.677
LPERR07G05890 Leersia perrieri LPERR07G05890 I 0.796
LPERR07G17030 Leersia perrieri LPERR07G17030 I 0.704
LPERR09G12960 Leersia perrieri LPERR09G12960 I 0.737
LPERR12G14340 Leersia perrieri LPERR12G14340 I 0.787
Lus10001298.g Linum usitatissimum Lus10001298.g I 0.820
Lus10010652.g Linum usitatissimum Lus10010652.g I 0.783
Lus10012703.g Linum usitatissimum Lus10012703.g I 0.820
Lus10013614.g Linum usitatissimum Lus10013614.g I 0.738
Lus10013764.g Linum usitatissimum Lus10013764.g I 0.734
Lus10030430.g Linum usitatissimum Lus10030430.g I 0.800
Lus10036556.g Linum usitatissimum Lus10036556.g I 0.744
Lus10036793.g Linum usitatissimum Lus10036793.g I 0.818
Lus10037137.g Linum usitatissimum Lus10037137.g I 0.818
Lus10039171.g Linum usitatissimum Lus10039171.g I 0.736
Lus10041372.g Linum usitatissimum Lus10041372.g I 0.743
MDP0000127123 Malus domestica MDP0000127123 N 0.683
MDP0000128326 Malus domestica MDP0000128326 I 0.746
MDP0000133476 Malus domestica MDP0000133476 I 0.744
MDP0000138669 Malus domestica MDP0000138669 I 0.744
MDP0000157628 Malus domestica MDP0000157628 I 0.727
MDP0000177547 Malus domestica MDP0000177547 I 0.796
MDP0000197375 Malus domestica MDP0000197375 I 0.727
MDP0000276536 Malus domestica MDP0000276536 I 0.823
MDP0000525933 Malus domestica MDP0000525933 I 0.745
MDP0000551969 Malus domestica MDP0000551969 I 0.823
mgf018851m Mimulus guttatus mgf018851m I 0.744
mgf022665m Mimulus guttatus mgf022665m I 0.793
mgf022810m Mimulus guttatus mgf022810m I 0.772
mgf023693m Mimulus guttatus mgf023693m I 0.772
MLOC_18783 Hordeum vulgare MLOC_18783 I 0.745
MLOC_69002 Hordeum vulgare MLOC_69002 I 0.687
MLOC_7255 Hordeum vulgare MLOC_7255 I 0.823
MTR_2g016730 Medicago truncatula MTR_2g016730 N 0.693
MTR_4g082345 Medicago truncatula MTR_4g082345 I 0.728
MTR_6g012970 Medicago truncatula MTR_6g012970 I 0.823
MTR_6g029180 Medicago truncatula MTR_6g029180 I 0.715
MTR_7g011630 Medicago truncatula MTR_7g011630 I 0.815
MTR_7g085810 Medicago truncatula MTR_7g085810 I 0.796
MTR_8g032610 Medicago truncatula MTR_8g032610 I 0.723
OB07G15030 Oryza brachyantha OB07G15030 I 0.796
OB09G23520 Oryza brachyantha OB09G23520 I 0.746
OBART07G06690 Oryza barthii OBART07G06690 I 0.796
OBART07G19610 Oryza barthii OBART07G19610 I 0.687
OBART12G17080 Oryza barthii OBART12G17080 I 0.823
OGLUM07G06400 Oryza glumaepatula OGLUM07G06400 I 0.796
OGLUM07G19400 Oryza glumaepatula OGLUM07G19400 I 0.687
OGLUM09G17450 Oryza glumaepatula OGLUM09G17450 I 0.737
OGLUM12G18720 Oryza glumaepatula OGLUM12G18720 I 0.823
OLONG_022569 Oryza longistaminata OLONG_022569 I 0.796
OMERI07G16350 Oryza meridionalis OMERI07G16350 I 0.687
OMERI09G12500 Oryza meridionalis OMERI09G12500 I 0.750
OMERI11G15200 Oryza meridionalis OMERI11G15200 I 0.823
ONIVA01G29960 Oryza nivara ONIVA01G29960 I 0.796
ONIVA07G17970 Oryza nivara ONIVA07G17970 I 0.687
ONIVA09G17920 Oryza nivara ONIVA09G17920 I 0.748
ONIVA12G15550 Oryza nivara ONIVA12G15550 I 0.823
OPUNC07G06390 Oryza punctata OPUNC07G06390 I 0.791
OPUNC07G18550 Oryza punctata OPUNC07G18550 I 0.687
OPUNC09G15300 Oryza punctata OPUNC09G15300 I 0.750
OPUNC12G15550 Oryza punctata OPUNC12G15550 I 0.823
orange1.1g016393m.g Citrus sinensis orange1.1g016393m.g I 0.714
orange1.1g023169m.g Citrus sinensis orange1.1g023169m.g I 0.783
orange1.1g037119m.g Citrus sinensis orange1.1g037119m.g I 0.744
orange1.1g042608m.g Citrus sinensis orange1.1g042608m.g N 0.694
orange1.1g043751m.g Citrus sinensis orange1.1g043751m.g I 0.783
orange1.1g046190m.g Citrus sinensis orange1.1g046190m.g I 0.822
orange1.1g046337m.g Citrus sinensis orange1.1g046337m.g I 0.823
ORGLA07G0057000 Oryza glaberrima ORGLA07G0057000 I 0.796
ORGLA07G0253000 Oryza glaberrima ORGLA07G0253000 I 0.687
ORGLA12G0200400 Oryza glaberrima ORGLA12G0200400 I 0.823
ORUFI07G06610 Oryza rufipogon ORUFI07G06610 I 0.796
ORUFI07G20430 Oryza rufipogon ORUFI07G20430 I 0.687
ORUFI09G18220 Oryza rufipogon ORUFI09G18220 I 0.750
ORUFI12G19000 Oryza rufipogon ORUFI12G19000 I 0.823
OS07G0204000 Oryza sativa OS07G0204000 I 0.796
OS07G0575000 Oryza sativa OS07G0575000 I 0.687
OS12G0582900 Oryza sativa OS12G0582900 I 0.823
Pavir.Ba00533 Panicum virgatum Pavir.Ba00533 I 0.683
Pavir.Ba01277 Panicum virgatum Pavir.Ba01277 I 0.745
Pavir.Ba03636 Panicum virgatum Pavir.Ba03636 I 0.798
Pavir.Bb00676 Panicum virgatum Pavir.Bb00676 I 0.793
Pavir.Cb00448 Panicum virgatum Pavir.Cb00448 I 0.820
Pavir.Ia01300 Panicum virgatum Pavir.Ia01300 I 0.820
Pavir.Ib03934 Panicum virgatum Pavir.Ib03934 I 0.820
Pavir.J19478 Panicum virgatum Pavir.J19478 I 0.683
Pavir.J28133 Panicum virgatum Pavir.J28133 I 0.820
Pavir.J28151 Panicum virgatum Pavir.J28151 I 0.820
PGSC0003DMG400001343 Solanum tuberosum PGSC0003DMG400001343 I 0.823
PGSC0003DMG400005621 Solanum tuberosum PGSC0003DMG400005621 N 0.681
PGSC0003DMG400017051 Solanum tuberosum PGSC0003DMG400017051 I 0.728
PGSC0003DMG400023701 Solanum tuberosum PGSC0003DMG400023701 I 0.720
PGSC0003DMG400024606 Solanum tuberosum PGSC0003DMG400024606 I 0.697
PGSC0003DMG400025151 Solanum tuberosum PGSC0003DMG400025151 I 0.814
PK13330.1 Cannabis sativa PK13330.1 I 0.823
PK25269.1 Cannabis sativa PK25269.1 I 0.761
PK28640.1 Cannabis sativa PK28640.1 I 0.710
Pm000004 Prunus mume Pm000004 I 0.745
Pm008788 Prunus mume Pm008788 I 0.744
Pm015931 Prunus mume Pm015931 I 0.823
Pm025326 Prunus mume Pm025326 I 0.796
Pm030235 Prunus mume Pm030235 I 0.727
POPTR_0001s04190 Populus trichocarpa POPTR_0001s04190 I 0.796
POPTR_0001s45740 Populus trichocarpa POPTR_0001s45740 N 0.681
POPTR_0003s21090 Populus trichocarpa POPTR_0003s21090 I 0.796
POPTR_0008s09080 Populus trichocarpa POPTR_0008s09080 I 0.814
POPTR_0010s17110 Populus trichocarpa POPTR_0010s17110 I 0.768
POPTR_0013s05330 Populus trichocarpa POPTR_0013s05330 I 0.700
POPTR_0014s07280 Populus trichocarpa POPTR_0014s07280 I 0.744
POPTR_0017s12370 Populus trichocarpa POPTR_0017s12370 I 0.823
POPTR_0019s05170 Populus trichocarpa POPTR_0019s05170 I 0.694
PRUPE_ppa016109mg Prunus persica PRUPE_ppa016109mg I 0.796
PRUPE_ppa018710mg Prunus persica PRUPE_ppa018710mg I 0.727
PRUPE_ppa019500mg Prunus persica PRUPE_ppa019500mg N 0.681
PRUPE_ppa022202mg Prunus persica PRUPE_ppa022202mg I 0.744
PRUPE_ppa025010mg Prunus persica PRUPE_ppa025010mg I 0.823
PRUPE_ppa025828mg Prunus persica PRUPE_ppa025828mg I 0.745
SapurV1A.0081s0430 Salix purpurea SapurV1A.0081s0430 I 0.770
SapurV1A.0322s0110 Salix purpurea SapurV1A.0322s0110 I 0.823
SapurV1A.0598s0020 Salix purpurea SapurV1A.0598s0020 I 0.694
SapurV1A.0918s0170 Salix purpurea SapurV1A.0918s0170 I 0.796
SapurV1A.1886s0020 Salix purpurea SapurV1A.1886s0020 I 0.805
SapurV1A.2432s0010 Salix purpurea SapurV1A.2432s0010 I 0.744
Sb01g014810 Sorghum bicolor Sb01g014810 I 0.820
Sb02g006023 Sorghum bicolor Sb02g006023 I 0.799
Sb02g030350 Sorghum bicolor Sb02g030350 I 0.739
Sb08g019530 Sorghum bicolor Sb08g019530 I 0.823
RAP2.11 Arabidopsis lyrata scaffold_602074.1 I 0.796
SELMODRAFT_409196 Selaginella moellendorffii SELMODRAFT_409196 N 0.683
SELMODRAFT_411255 Selaginella moellendorffii SELMODRAFT_411255 N 0.683
SELMODRAFT_73140 Selaginella moellendorffii SELMODRAFT_73140 I 0.760
SELMODRAFT_73145 Selaginella moellendorffii SELMODRAFT_73145 I 0.760
Si024417m.g Setaria italica Si024417m.g I 0.820
Si027288m.g Setaria italica Si027288m.g I 0.705
Si030686m.g Setaria italica Si030686m.g I 0.683
Si032213m.g Setaria italica Si032213m.g I 0.745
Si033237m.g Setaria italica Si033237m.g I 0.799
Si038848m.g Setaria italica Si038848m.g I 0.823
Solyc01g005630.1 Solanum lycopersicum Solyc01g005630.1 I 0.765
Solyc01g091760.2 Solanum lycopersicum Solyc01g091760.2 I 0.728
Solyc02g067020.1 Solanum lycopersicum Solyc02g067020.1 I 0.809
Solyc03g114440.1 Solanum lycopersicum Solyc03g114440.1 N 0.695
Solyc03g119800.1 Solanum lycopersicum Solyc03g119800.1 N 0.681
Solyc10g080650.1 Solanum lycopersicum Solyc10g080650.1 I 0.720
TCM_005425 Theobroma cacao TCM_005425 I 0.744
TCM_011632 Theobroma cacao TCM_011632 I 0.786
TCM_014471 Theobroma cacao TCM_014471 I 0.724
TCM_015579 Theobroma cacao TCM_015579 I 0.714
TCM_018659 Theobroma cacao TCM_018659 I 0.823
TCM_025913 Theobroma cacao TCM_025913 I 0.796
TCM_040015 Theobroma cacao TCM_040015 I 0.796
Thhalv10015715m.g Eutrema salsugineum Thhalv10015715m.g I 0.796
Traes_2BS_B1A73C7A8 Triticum aestivum Traes_2BS_B1A73C7A8 I 0.687
Traes_5DS_1BDB9837E Triticum aestivum Traes_5DS_1BDB9837E I 0.823
VIT_02s0025g03170 Vitis vinifera VIT_02s0025g03170 N 0.679
VIT_06s0004g00490 Vitis vinifera VIT_06s0004g00490 I 0.762
RAP2.11 Vitis vinifera VIT_08s0007g07250 I 0.796
VIT_14s0108g01220 Vitis vinifera VIT_14s0108g01220 I 0.823
VIT_17s0000g04480 Vitis vinifera VIT_17s0000g04480 I 0.708