Bo2g138790 (Brassica oleracea)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Bo2g138790 T000759_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF119
M01093_2.00 		Arabidopsis thaliana
NNNGCCGNN
NNCGGCNNN		 PBM
Lambert et al.(2019)
pTH11551 		0.747 0.875
ERF118
M01047_2.00 		Arabidopsis thaliana
NCGCCGYNN
NNRCGGCGN		 PBM
Sullivan et al.(2014)
pTH7330 		0.696 0.771
ERF118
M06591_2.00 		Arabidopsis thaliana
YHDYCKCCGCCGYHD
HDRCGGCGGMGRHDR		 Dap-seq
OMalley et al.(2016)
CRF10_col100_a 		0.696 0.771
ERF118
M06592_2.00 		Arabidopsis thaliana
NGDATCHNDGATTCNNH
DNNGAATCHNDGATHCN		 Dap-seq
OMalley et al.(2016)
CRF10_colamp_a 		0.696 0.771
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo2g138790.1 AP2 132 183

Links

Other AP2 family TFs
Other Brassica oleracea TFs

16 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cagra.6197s0021 Capsella grandiflora Cagra.6197s0021 I 0.763
scaffold_500470.1 Arabidopsis lyrata scaffold_500470.1 I 0.763
Carubv10017565m.g Capsella rubella Carubv10017565m.g I 0.759
Thhalv10004526m.g Eutrema salsugineum Thhalv10004526m.g I 0.757
Bo7g082250 Brassica oleracea Bo7g082250 I 0.757
Bra025170 Brassica rapa Bra025170 I 0.757
Bra036360 Brassica rapa Bra036360 I 0.750
ERF119 Arabidopsis thaliana AT3G25890 D 0.747
Bostr.0556s0264 Boechera stricta Bostr.0556s0264 I 0.744
Gorai.008G183300 Gossypium raimondii Gorai.008G183300 I 0.702
TCM_011811 Theobroma cacao TCM_011811 I 0.702
evm.TU.supercontig_1.178 Carica papaya evm.TU.supercontig_1.178 I 0.697
Bostr.26959s0035 Boechera stricta Bostr.26959s0035 I 0.697
ERF118 Arabidopsis thaliana AT1G68550 D 0.696
fgenesh2_kg.2__1107__AT1G68550.2 Arabidopsis lyrata fgenesh2_kg.2__1107__AT1G68550.2 I 0.690
Thhalv10019722m.g Eutrema salsugineum Thhalv10019722m.g I 0.680