Bo3g013160 (Brassica oleracea)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Bo3g013160 T000768_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
DREB2G
M06662_2.00
Arabidopsis thaliana
DCCRCCGCYDYHDYH

DRHDRHRGCGGYGGH
Dap-seq
OMalley et al.(2016)
At5g18450_col_a
0.744 0.939
DREB2D
M01611_2.00
Arabidopsis thaliana
NNRCCGHNN

NNDCGGYNN
PBM
Weirauch et al.(2014)
pTH8108
0.690 0.816
DREB2D
M06597_2.00
Arabidopsis thaliana
YHNYYDCCRCCGYYD

HRRCGGYGGHRRNDR
Dap-seq
OMalley et al.(2016)
At1g75490_col_a
0.690 0.816
DREB2D
M06598_2.00
Arabidopsis thaliana
HNNHDYCACCGHYWN

NWRDCGGTGRHDNND
Dap-seq
OMalley et al.(2016)
At1g75490_colamp_a
0.690 0.816
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo3g013160.1 AP2 32 83

Links

Other AP2 family TFs
Other Brassica oleracea TFs

72 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AACERI_AaceriAAR174W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAAR174W N 0.000
AGOS_AAR174W Ashbya gossypii AGOS_AAR174W N 0.000
Ecym_3059 Eremothecium cymbalariae Ecym_3059 N 0.000
fgenesh1_pg.C_chr_6.1000068 Pichia stipitis fgenesh1_pg.C_chr_6.1000068 I 0.000
KAFR_0F02680 Kazachstania africana KAFR_0F02680 I 0.000
Kwal_1746 Kluyveromyces waltii Kwal_1746 I 0.000
PICST_32587 Scheffersomyces stipitis PICST_32587 I 0.000
SAKL0A06842g Lachancea kluyveri SAKL0A06842g I 0.000