CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Bo3g023490
(
Brassica oleracea
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
Bo3g023490
T000773_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ERF025
M06680_2.00
Arabidopsis thaliana
NNNYYGCCGACANHN
NDNTGTCGGCRRNNN
Dap-seq
OMalley et al.(2016)
Rap210_col_a
0.727
0.939
ERF025
M06681_2.00
Arabidopsis thaliana
NNNYNRCCGACANN
NNTGTCGGYNRNNN
Dap-seq
OMalley et al.(2016)
Rap210_colamp_a
0.727
0.939
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo3g023490.1
AP2
69
119
SFFRGIRLRNGKWVSEIREPRKTTRIWLGTYPVPEMAAAAYDVASLALKGS
Links
Other
AP2
family TFs
Other
Brassica oleracea
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy