Bo4g070350 (Brassica oleracea)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Bo4g070350 T000813_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAP2.7
M00845_2.00 		Arabidopsis thaliana
KRCGRGGD
HCCYCGYM		 PBM
Franco-Zorrilla et al.(2014)
TOE1 		0.846 0.969
Q9XHD4_PETHY
M09737_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AP2A_01 		0.836 0.969
Q9XHD3_PETHY
M09736_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AP2B_01 		0.820 0.928
P93632_MAIZE
M09712_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GL15_01 		0.790 0.845
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo4g070350.1 AP2 138 187
Bo4g070350.1 AP2 230 280

Links

Other AP2 family TFs
Other Brassica oleracea TFs

241 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bra011939 Brassica rapa Bra011939 I 0.854
Thhalv10016626m.g Eutrema salsugineum Thhalv10016626m.g I 0.851
RAP2.7 Arabidopsis thaliana AT2G28550 D 0.846
Cagra.1809s0003 Capsella grandiflora Cagra.1809s0003 I 0.846
Carubv10025387m.g Capsella rubella Carubv10025387m.g I 0.846
MTR_4g061200 Medicago truncatula MTR_4g061200 I 0.845
LjSGA_005424.1 Lotus japonicus LjSGA_005424.1 I 0.844
OPUNC05G01480 Oryza punctata OPUNC05G01480 I 0.841
Pavir.J11433 Panicum virgatum Pavir.J11433 I 0.841
GLYMA13G40470 Glycine max GLYMA13G40470 I 0.841
GLYMA12G07800 Glycine max GLYMA12G07800 I 0.841
GLYMA11G15650 Glycine max GLYMA11G15650 I 0.841
Ca_02499 Cicer arietinum Ca_02499 I 0.841
Eucgr.J02113 Eucalyptus grandis Eucgr.J02113 I 0.841
28752.m000339 Ricinus communis 28752.m000339 I 0.841
Aquca_027_00133 Aquilegia coerulea Aquca_027_00133 I 0.841
Pavir.J23348 Panicum virgatum Pavir.J23348 I 0.841
RAP2.7 Vitis vinifera VIT_06s0004g03590 I 0.841
orange1.1g010454m.g Citrus sinensis orange1.1g010454m.g I 0.841
cassava13566.valid.m1 Manihot esculenta cassava13566.valid.m1 I 0.841
cassava24954.valid.m1 Manihot esculenta cassava24954.valid.m1 I 0.841
PGSC0003DMG400025390 Solanum tuberosum PGSC0003DMG400025390 I 0.841
AMTR_s00035p00205430 Amborella trichopoda AMTR_s00035p00205430 I 0.841
Si025305m.g Setaria italica Si025305m.g I 0.841
OS05G0121600 Oryza sativa OS05G0121600 I 0.841
chr3.LjT05P05.30.nd Lotus japonicus chr3.LjT05P05.30.nd I 0.841
BGIOSGA018911 Oryza indica BGIOSGA018911 I 0.841
ORGLA05G0015400 Oryza glaberrima ORGLA05G0015400 I 0.841
PDK_20s1506731g001 Phoenix dactylifera PDK_20s1506731g001 I 0.841
Gorai.002G251500 Gossypium raimondii Gorai.002G251500 I 0.840
GSMUA_Achr10G03230_001 Musa acuminata GSMUA_Achr10G03230_001 I 0.840
PGSC0003DMG400027904 Solanum tuberosum PGSC0003DMG400027904 I 0.840
Pm002492 Prunus mume Pm002492 I 0.840
MDP0000200319 Malus domestica MDP0000200319 I 0.840
VIT_08s0040g03180 Vitis vinifera VIT_08s0040g03180 I 0.840
POPTR_0016s08530 Populus trichocarpa POPTR_0016s08530 I 0.840
PRUPE_ppa005230mg Prunus persica PRUPE_ppa005230mg I 0.840
SapurV1A.0247s0170 Salix purpurea SapurV1A.0247s0170 I 0.840
Cucsa.367290 Cucumis sativus Cucsa.367290 I 0.840
TCM_022077 Theobroma cacao TCM_022077 I 0.840
GSMUA_Achr9G03060_001 Musa acuminata GSMUA_Achr9G03060_001 I 0.840
GSMUA_Achr6G33140_001 Musa acuminata GSMUA_Achr6G33140_001 I 0.839
Ca_14618 Cicer arietinum Ca_14618 I 0.839
PK07183.1 Cannabis sativa PK07183.1 I 0.839
LjT39B13.80.nc Lotus japonicus LjT39B13.80.nc I 0.838
MTR_2g093060 Medicago truncatula MTR_2g093060 I 0.838
GLYMA03G33470 Glycine max GLYMA03G33470 I 0.838
GRMZM2G700665 Zea mays GRMZM2G700665 I 0.837
VIT_13s0019g03550 Vitis vinifera VIT_13s0019g03550 I 0.837
Pm000974 Prunus mume Pm000974 I 0.837
MDP0000181606 Malus domestica MDP0000181606 I 0.837
GSMUA_AchrUn_randomG10320_001 Musa acuminata GSMUA_AchrUn_randomG10320_001 I 0.837
Cucsa.307230 Cucumis sativus Cucsa.307230 I 0.836
Traes_1DS_2BB06F54C Triticum aestivum Traes_1DS_2BB06F54C I 0.836
TCM_042000 Theobroma cacao TCM_042000 I 0.836
Solyc03g044300.2 Solanum lycopersicum Solyc03g044300.2 I 0.836
POPTR_0006s13460 Populus trichocarpa POPTR_0006s13460 I 0.836
Traes_1AS_90F3120F8 Triticum aestivum Traes_1AS_90F3120F8 I 0.836
Traes_1BS_E68807072 Triticum aestivum Traes_1BS_E68807072 I 0.836
Cla018124 Citrullus lanatus Cla018124 I 0.836
Ca_09295 Cicer arietinum Ca_09295 I 0.836
MTR_4g094868 Medicago truncatula MTR_4g094868 I 0.836
Q9XHD4_PETHY Petunia x hybrida Q9XHD4_PETHY D 0.836
Cagra.4909s0048 Capsella grandiflora Cagra.4909s0048 I 0.836
Bo7g118400 Brassica oleracea Bo7g118400 I 0.836
F775_32962 Aegilops tauschii F775_32962 I 0.836
Bo1g004960 Brassica oleracea Bo1g004960 I 0.836
Bra011741 Brassica rapa Bra011741 I 0.836
GSMUA_Achr1G09830_001 Musa acuminata GSMUA_Achr1G09830_001 I 0.836
Gorai.004G002100 Gossypium raimondii Gorai.004G002100 I 0.836
Bra017809 Brassica rapa Bra017809 I 0.836
Ciclev10028259m.g Citrus clementina Ciclev10028259m.g I 0.836
GSMUA_Achr6G34420_001 Musa acuminata GSMUA_Achr6G34420_001 I 0.836
AP2 Arabidopsis lyrata fgenesh2_kg.7__332__AT4G36920.1 I 0.836
AP2 Arabidopsis thaliana AT4G36920 I 0.836
SapurV1A.0209s0320 Salix purpurea SapurV1A.0209s0320 I 0.836
mgf021945m Mimulus guttatus mgf021945m I 0.836
Carubv10004818m.g Capsella rubella Carubv10004818m.g I 0.836
Bostr.7867s1579 Boechera stricta Bostr.7867s1579 I 0.836
BRADI2G37800 Brachypodium distachyon BRADI2G37800 I 0.836
Solyc10g084340.1 Solanum lycopersicum Solyc10g084340.1 I 0.835
SapurV1A.0689s0070 Salix purpurea SapurV1A.0689s0070 I 0.835
PK02403.1 Cannabis sativa PK02403.1 I 0.835
POPTR_0007s10780 Populus trichocarpa POPTR_0007s10780 I 0.835
PGSC0003DMG400006482 Solanum tuberosum PGSC0003DMG400006482 I 0.835
PGSC0003DMG400004006 Solanum tuberosum PGSC0003DMG400004006 I 0.835
Solyc02g093150.2 Solanum lycopersicum Solyc02g093150.2 I 0.835
GLYMA17G18640 Glycine max GLYMA17G18640 I 0.835
GSMUA_Achr3G13180_001 Musa acuminata GSMUA_Achr3G13180_001 I 0.835
GLYMA01G39520 Glycine max GLYMA01G39520 I 0.835
Cla000716 Citrullus lanatus Cla000716 I 0.835
evm.TU.supercontig_55.116 Carica papaya evm.TU.supercontig_55.116 I 0.835
29805.m001494 Ricinus communis 29805.m001494 I 0.835
Cucsa.102550 Cucumis sativus Cucsa.102550 I 0.835
GSMUA_Achr1G26080_001 Musa acuminata GSMUA_Achr1G26080_001 I 0.835
GLYMA05G18041 Glycine max GLYMA05G18041 I 0.835
MTR_5g016810 Medicago truncatula MTR_5g016810 I 0.835
MLOC_43575 Hordeum vulgare MLOC_43575 I 0.835
Gorai.003G025900 Gossypium raimondii Gorai.003G025900 I 0.835
TOE3 Vitis vinifera VIT_07s0031g00220 I 0.835
chr1.CM0033.300.nc Lotus japonicus chr1.CM0033.300.nc I 0.834
Sb02g007000 Sorghum bicolor Sb02g007000 I 0.834
Pavir.Ba03394 Panicum virgatum Pavir.Ba03394 I 0.834
mgf009315m Mimulus guttatus mgf009315m I 0.834
Si029636m.g Setaria italica Si029636m.g I 0.834
BGIOSGA025426 Oryza indica BGIOSGA025426 I 0.834
ORUFI07G08180 Oryza rufipogon ORUFI07G08180 I 0.834
OGLUM07G07330 Oryza glumaepatula OGLUM07G07330 I 0.834
ORGLA07G0068600 Oryza glaberrima ORGLA07G0068600 I 0.834
OMERI07G06850 Oryza meridionalis OMERI07G06850 I 0.834
ONIVA03G25220 Oryza nivara ONIVA03G25220 I 0.834
OPUNC07G07690 Oryza punctata OPUNC07G07690 I 0.834
OBART07G08110 Oryza barthii OBART07G08110 I 0.834
OLONG_021321 Oryza longistaminata OLONG_021321 I 0.834
GSMUA_AchrUn_randomG16200_001 Musa acuminata GSMUA_AchrUn_randomG16200_001 I 0.834
GRMZM2G176175 Zea mays GRMZM2G176175 I 0.834
OS07G0235800 Oryza sativa OS07G0235800 I 0.834
Aquca_010_00628 Aquilegia coerulea Aquca_010_00628 I 0.833
BRADI1G53650 Brachypodium distachyon BRADI1G53650 I 0.833
Sb01g003400 Sorghum bicolor Sb01g003400 I 0.832
Pavir.J41060 Panicum virgatum Pavir.J41060 I 0.832
Gorai.007G215900 Gossypium raimondii Gorai.007G215900 I 0.832
Gorai.008G077800 Gossypium raimondii Gorai.008G077800 I 0.832
GRMZM5G862109 Zea mays GRMZM5G862109 I 0.832
Si036068m.g Setaria italica Si036068m.g I 0.832
Pavir.J23520 Panicum virgatum Pavir.J23520 I 0.832
TCM_000665 Theobroma cacao TCM_000665 I 0.832
Aquca_007_00714 Aquilegia coerulea Aquca_007_00714 I 0.830
SapurV1A.1340s0010 Salix purpurea SapurV1A.1340s0010 I 0.830
OGLUM03G38790 Oryza glumaepatula OGLUM03G38790 I 0.830
GSMUA_Achr8G18550_001 Musa acuminata GSMUA_Achr8G18550_001 I 0.830
ONIVA03G40610 Oryza nivara ONIVA03G40610 I 0.830
OMERI03G35820 Oryza meridionalis OMERI03G35820 I 0.830
OPUNC03G36030 Oryza punctata OPUNC03G36030 I 0.830
BGIOSGA013826 Oryza indica BGIOSGA013826 I 0.830
PGSC0003DMG400025479 Solanum tuberosum PGSC0003DMG400025479 I 0.830
ORUFI03G40640 Oryza rufipogon ORUFI03G40640 I 0.830
Solyc02g064960.2 Solanum lycopersicum Solyc02g064960.2 I 0.829
Si012635m.g Setaria italica Si012635m.g I 0.827
GRMZM2G174784 Zea mays GRMZM2G174784 I 0.827
BGIOSGA017250 Oryza indica BGIOSGA017250 I 0.827
Lus10023165.g Linum usitatissimum Lus10023165.g I 0.827
OGLUM04G27380 Oryza glumaepatula OGLUM04G27380 I 0.827
POPTR_0005s18400 Populus trichocarpa POPTR_0005s18400 I 0.827
OPUNC04G24930 Oryza punctata OPUNC04G24930 I 0.827
ONIVA04G25920 Oryza nivara ONIVA04G25920 I 0.827
ORGLA04G0237800 Oryza glaberrima ORGLA04G0237800 I 0.827
ORUFI04G29120 Oryza rufipogon ORUFI04G29120 I 0.827
OMERI04G22900 Oryza meridionalis OMERI04G22900 I 0.827
Sb06g030670 Sorghum bicolor Sb06g030670 I 0.827
BRADI5G24100 Brachypodium distachyon BRADI5G24100 I 0.826
GSMUA_Achr8G01980_001 Musa acuminata GSMUA_Achr8G01980_001 I 0.826
Lus10019331.g Linum usitatissimum Lus10019331.g I 0.825
Cucsa.051660 Cucumis sativus Cucsa.051660 I 0.825
Gorai.009G104200 Gossypium raimondii Gorai.009G104200 I 0.825
GSMUA_Achr3G28340_001 Musa acuminata GSMUA_Achr3G28340_001 I 0.825
Lus10009374.g Linum usitatissimum Lus10009374.g I 0.825
mgf005133m Mimulus guttatus mgf005133m I 0.824
mgf010466m Mimulus guttatus mgf010466m I 0.824
29169.m000017 Ricinus communis 29169.m000017 I 0.824
GSMUA_Achr5G29290_001 Musa acuminata GSMUA_Achr5G29290_001 I 0.824
cassava12358.valid.m1 Manihot esculenta cassava12358.valid.m1 I 0.824
GSMUA_Achr9G04270_001 Musa acuminata GSMUA_Achr9G04270_001 I 0.822
MTR_7g100590 Medicago truncatula MTR_7g100590 I 0.822
OB03G45870 Oryza brachyantha OB03G45870 I 0.822
Solyc06g075510.2 Solanum lycopersicum Solyc06g075510.2 I 0.822
Ca_12010 Cicer arietinum Ca_12010 I 0.822
GSMUA_Achr4G06100_001 Musa acuminata GSMUA_Achr4G06100_001 I 0.821
cassava2301.valid.m1 Manihot esculenta cassava2301.valid.m1 I 0.821
evm.TU.supercontig_114.55 Carica papaya evm.TU.supercontig_114.55 I 0.820
Q9XHD3_PETHY Petunia x hybrida Q9XHD3_PETHY D 0.820
GSMUA_Achr11G23870_001 Musa acuminata GSMUA_Achr11G23870_001 I 0.819
MDP0000137561 Malus domestica MDP0000137561 I 0.819
PGSC0003DMG400011046 Solanum tuberosum PGSC0003DMG400011046 I 0.818
Eucgr.B02453 Eucalyptus grandis Eucgr.B02453 I 0.818
Eucgr.I00892 Eucalyptus grandis Eucgr.I00892 I 0.818
Pm030172 Prunus mume Pm030172 I 0.818
gene23876-v1.0-hybrid Fragaria vesca gene23876-v1.0-hybrid I 0.818
PRUPE_ppa003783mg Prunus persica PRUPE_ppa003783mg I 0.818
POPTR_0008s04490 Populus trichocarpa POPTR_0008s04490 I 0.817
Lus10018124.g Linum usitatissimum Lus10018124.g I 0.817
SapurV1A.0038s0220 Salix purpurea SapurV1A.0038s0220 I 0.816
Lus10026477.g Linum usitatissimum Lus10026477.g I 0.816
GLYMA19G36200 Glycine max GLYMA19G36200 I 0.816
Lus10019905.g Linum usitatissimum Lus10019905.g I 0.816
Gorai.011G106200 Gossypium raimondii Gorai.011G106200 I 0.815
GLYMA15G04930 Glycine max GLYMA15G04930 I 0.814
ORUFI06G23930 Oryza rufipogon ORUFI06G23930 I 0.813
Pavir.J37968 Panicum virgatum Pavir.J37968 I 0.813
OPUNC06G19990 Oryza punctata OPUNC06G19990 I 0.813
ONIVA06G26190 Oryza nivara ONIVA06G26190 I 0.813
OGLUM06G23380 Oryza glumaepatula OGLUM06G23380 I 0.813
BGIOSGA020813 Oryza indica BGIOSGA020813 I 0.813
OB06G29960 Oryza brachyantha OB06G29960 I 0.813
OMERI06G22190 Oryza meridionalis OMERI06G22190 I 0.813
LPERR06G18460 Leersia perrieri LPERR06G18460 I 0.812
orange1.1g010763m.g Citrus sinensis orange1.1g010763m.g I 0.811
GSMUA_Achr5G07270_001 Musa acuminata GSMUA_Achr5G07270_001 I 0.811
Ciclev10031306m.g Citrus clementina Ciclev10031306m.g I 0.811
GRMZM2G416701 Zea mays GRMZM2G416701 I 0.808
MDP0000163645 Malus domestica MDP0000163645 I 0.802
Lus10015055.g Linum usitatissimum Lus10015055.g I 0.802
Bo7g064000 Brassica oleracea Bo7g064000 I 0.802
Bra012139 Brassica rapa Bra012139 I 0.802
AMTR_s00058p00216470 Amborella trichopoda AMTR_s00058p00216470 I 0.801
evm.TU.supercontig_139.43 Carica papaya evm.TU.supercontig_139.43 I 0.800
Pavir.J27340 Panicum virgatum Pavir.J27340 I 0.799
orange1.1g009943m.g Citrus sinensis orange1.1g009943m.g I 0.798
GSMUA_Achr8G21030_001 Musa acuminata GSMUA_Achr8G21030_001 I 0.798
Ciclev10025364m.g Citrus clementina Ciclev10025364m.g I 0.798
Lus10004990.g Linum usitatissimum Lus10004990.g I 0.797
BRADI1G30337 Brachypodium distachyon BRADI1G30337 I 0.795
Cla020549 Citrullus lanatus Cla020549 I 0.795
Thhalv10004742m.g Eutrema salsugineum Thhalv10004742m.g I 0.794
cassava13884.valid.m1 Manihot esculenta cassava13884.valid.m1 I 0.794
OS03G0818800 Oryza sativa OS03G0818800 I 0.792
MLOC_43041 Hordeum vulgare MLOC_43041 I 0.790
GRMZM2G160730 Zea mays GRMZM2G160730 I 0.790
P93632_MAIZE Zea mays P93632_MAIZE D 0.790
Sb10g025053 Sorghum bicolor Sb10g025053 I 0.790
Lus10041595.g Linum usitatissimum Lus10041595.g I 0.788
TOE3 Arabidopsis thaliana AT5G67180 I 0.784
Bostr.0568s0140 Boechera stricta Bostr.0568s0140 I 0.784
Cagra.0342s0004 Capsella grandiflora Cagra.0342s0004 I 0.784
TOE3 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002628 I 0.784
Lus10036141.g Linum usitatissimum Lus10036141.g I 0.784
Carubv10026667m.g Capsella rubella Carubv10026667m.g I 0.784
Pavir.Da00466 Panicum virgatum Pavir.Da00466 I 0.783
gene25394-v1.0-hybrid Fragaria vesca gene25394-v1.0-hybrid I 0.783
gene18102-v1.0-hybrid Fragaria vesca gene18102-v1.0-hybrid I 0.781
Cucsa.065640 Cucumis sativus Cucsa.065640 I 0.779
OLONG_026757 Oryza longistaminata OLONG_026757 I 0.778
LPERR05G01420 Leersia perrieri LPERR05G01420 I 0.778
Cla018549 Citrullus lanatus Cla018549 I 0.774
Ciclev10011588m.g Citrus clementina Ciclev10011588m.g I 0.766
Traes_7DL_7B0ABD21E Triticum aestivum Traes_7DL_7B0ABD21E I 0.701
Thhalv10025268m.g Eutrema salsugineum Thhalv10025268m.g I 0.691
Solyc11g072600.1 Solanum lycopersicum Solyc11g072600.1 I 0.689
PK14490.1 Cannabis sativa PK14490.1 I 0.689
POPTR_0010s22320 Populus trichocarpa POPTR_0010s22320 I 0.680
Si006371m.g Setaria italica Si006371m.g I 0.680