Bo5g086680 (Brassica oleracea)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Bo5g086680 T000846_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF021
M06593_2.00
Arabidopsis thaliana
HNYCDYCDYCDYCRCCGHCD

HGDCGGYGRHGRHGRHGRND
Dap-seq
OMalley et al.(2016)
AT1G71450_col_a
0.717 0.820
ERF021
M06594_2.00
Arabidopsis thaliana
NHNNCRCCGHCDH

DHGDCGGYGNNDN
Dap-seq
OMalley et al.(2016)
AT1G71450_colamp_a
0.717 0.820
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo5g086680.1 AP2 18 69

Links

Other AP2 family TFs
Other Brassica oleracea TFs

112 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Bra010210 Brassica rapa Bra010210 I 0.806
Gorai.009G266700 Gossypium raimondii Gorai.009G266700 I 0.785
TCM_036270 Theobroma cacao TCM_036270 I 0.782
GLYMA01G44130 Glycine max GLYMA01G44130 I 0.775
POPTR_0013s10330 Populus trichocarpa POPTR_0013s10330 I 0.772
SapurV1A.3106s0010 Salix purpurea SapurV1A.3106s0010 I 0.772
POPTR_0019s10430 Populus trichocarpa POPTR_0019s10430 I 0.772
SapurV1A.0551s0040 Salix purpurea SapurV1A.0551s0040 I 0.772
evm.TU.supercontig_21.70 Carica papaya evm.TU.supercontig_21.70 I 0.770
TCM_036269 Theobroma cacao TCM_036269 I 0.767
Lus10002953.g Linum usitatissimum Lus10002953.g I 0.763
Bo8g027240 Brassica oleracea Bo8g027240 I 0.763
cassava45911.m1 Manihot esculenta cassava45911.m1 I 0.760
Thhalv10010002m.g Eutrema salsugineum Thhalv10010002m.g I 0.758
ERF022 Arabidopsis thaliana AT1G33760 I 0.756
27805.m000021 Ricinus communis 27805.m000021 I 0.756
PGSC0003DMG400018054 Solanum tuberosum PGSC0003DMG400018054 I 0.755
Gorai.009G266600 Gossypium raimondii Gorai.009G266600 I 0.754
POPTR_0003s05300 Populus trichocarpa POPTR_0003s05300 I 0.752
Carubv10012215m.g Capsella rubella Carubv10012215m.g I 0.751
gene27021-v1.0-hybrid Fragaria vesca gene27021-v1.0-hybrid I 0.751
Bra028009 Brassica rapa Bra028009 I 0.750
Lus10041052.g Linum usitatissimum Lus10041052.g N 0.746
evm.TU.supercontig_21.69 Carica papaya evm.TU.supercontig_21.69 I 0.746
Bostr.3359s0006 Boechera stricta Bostr.3359s0006 I 0.745
VIT_18s0001g05850 Vitis vinifera VIT_18s0001g05850 I 0.745
Cla012665 Citrullus lanatus Cla012665 I 0.744
Bo6g046850 Brassica oleracea Bo6g046850 I 0.744
PGSC0003DMG400017813 Solanum tuberosum PGSC0003DMG400017813 I 0.742
Cucsa.237150 Cucumis sativus Cucsa.237150 I 0.739
cassava43172.valid.m1 Manihot esculenta cassava43172.valid.m1 I 0.739
chr2.CM0018.470.nd Lotus japonicus chr2.CM0018.470.nd I 0.739
MTR_5g008590 Medicago truncatula MTR_5g008590 I 0.739
PRUPE_ppa012354mg Prunus persica PRUPE_ppa012354mg I 0.739
cassava8552.m1 Manihot esculenta cassava8552.m1 I 0.739
GLYMA11G01640 Glycine max GLYMA11G01640 I 0.739
GLYMA01G44140 Glycine max GLYMA01G44140 I 0.739
Pm004269 Prunus mume Pm004269 I 0.739
POPTR_0019s10420 Populus trichocarpa POPTR_0019s10420 I 0.738
SapurV1A.1331s0040 Salix purpurea SapurV1A.1331s0040 I 0.738
SapurV1A.1130s0100 Salix purpurea SapurV1A.1130s0100 I 0.738
SapurV1A.1130s0090 Salix purpurea SapurV1A.1130s0090 I 0.738
SapurV1A.1331s0050 Salix purpurea SapurV1A.1331s0050 I 0.738
Carubv10011715m.g Capsella rubella Carubv10011715m.g I 0.737
MDP0000283350 Malus domestica MDP0000283350 I 0.736
Pm004272 Prunus mume Pm004272 I 0.736
Eucgr.F02974 Eucalyptus grandis Eucgr.F02974 I 0.736
PRUPE_ppa018178mg Prunus persica PRUPE_ppa018178mg I 0.735
chr2.CM0018.610.nd Lotus japonicus chr2.CM0018.610.nd I 0.735
POPTR_0013s10340 Populus trichocarpa POPTR_0013s10340 I 0.733
Ciclev10023857m.g Citrus clementina Ciclev10023857m.g I 0.731
orange1.1g035756m.g Citrus sinensis orange1.1g035756m.g I 0.731
POPTR_0001s18180 Populus trichocarpa POPTR_0001s18180 I 0.730
Eucgr.F02975 Eucalyptus grandis Eucgr.F02975 I 0.729
Lus10003513.g Linum usitatissimum Lus10003513.g N 0.727
28118.m000034 Ricinus communis 28118.m000034 I 0.727
gene27017-v1.0-hybrid Fragaria vesca gene27017-v1.0-hybrid I 0.727
SapurV1A.0551s0030 Salix purpurea SapurV1A.0551s0030 I 0.727
MDP0000151428 Malus domestica MDP0000151428 I 0.723
AMTR_s00099p00039760 Amborella trichopoda AMTR_s00099p00039760 I 0.723
MDP0000122740 Malus domestica MDP0000122740 I 0.723
MDP0000122739 Malus domestica MDP0000122739 I 0.723
Gorai.005G116500 Gossypium raimondii Gorai.005G116500 I 0.723
Solyc11g042580.1 Solanum lycopersicum Solyc11g042580.1 I 0.723
Solyc11g042560.1 Solanum lycopersicum Solyc11g042560.1 I 0.722
scaffold_103754.1 Arabidopsis lyrata scaffold_103754.1 I 0.721
Eucgr.F02976 Eucalyptus grandis Eucgr.F02976 I 0.720
Cucsa.237170 Cucumis sativus Cucsa.237170 I 0.720
Cla012661 Citrullus lanatus Cla012661 I 0.720
Si026882m.g Setaria italica Si026882m.g I 0.718
Carubv10022349m.g Capsella rubella Carubv10022349m.g I 0.717
fgenesh2_kg.2__1406__AT1G71450.1 Arabidopsis lyrata fgenesh2_kg.2__1406__AT1G71450.1 I 0.717
ERF021 Arabidopsis thaliana AT1G71450 D 0.717
Bo2g072910 Brassica oleracea Bo2g072910 I 0.717
Cagra.2418s0001 Capsella grandiflora Cagra.2418s0001 I 0.717
Ciclev10024063m.g Citrus clementina Ciclev10024063m.g I 0.716
orange1.1g046901m.g Citrus sinensis orange1.1g046901m.g I 0.716
Thhalv10019659m.g Eutrema salsugineum Thhalv10019659m.g I 0.714
Bra016136 Brassica rapa Bra016136 I 0.714
Bo6g113020 Brassica oleracea Bo6g113020 I 0.707
Bra007975 Brassica rapa Bra007975 I 0.702
GSMUA_Achr2G20760_001 Musa acuminata GSMUA_Achr2G20760_001 I 0.700
LPERR11G07100 Leersia perrieri LPERR11G07100 I 0.699
BRADI4G21265 Brachypodium distachyon BRADI4G21265 I 0.698
OB11G16300 Oryza brachyantha OB11G16300 I 0.698
AC198403.3_FG001 Zea mays AC198403.3_FG001 I 0.698
ORUFI11G08240 Oryza rufipogon ORUFI11G08240 I 0.697
ORGLA11G0070000 Oryza glaberrima ORGLA11G0070000 I 0.697
OS11G0242300 Oryza sativa OS11G0242300 I 0.697
BGIOSGA034227 Oryza indica BGIOSGA034227 I 0.697
Sb05g007135 Sorghum bicolor Sb05g007135 I 0.697
OPUNC11G07750 Oryza punctata OPUNC11G07750 I 0.697
Pavir.J22217 Panicum virgatum Pavir.J22217 I 0.697
OGLUM11G07800 Oryza glumaepatula OGLUM11G07800 I 0.697
OMERI11G06840 Oryza meridionalis OMERI11G06840 I 0.697
ONIVA11G08160 Oryza nivara ONIVA11G08160 I 0.697
Pavir.J26137 Panicum virgatum Pavir.J26137 I 0.697
MTR_5g008550 Medicago truncatula MTR_5g008550 I 0.697
Traes_4DS_97AC77E13 Triticum aestivum Traes_4DS_97AC77E13 I 0.693
Traes_4BS_DD5E68382 Triticum aestivum Traes_4BS_DD5E68382 I 0.693
MLOC_55144 Hordeum vulgare MLOC_55144 I 0.693
F775_17299 Aegilops tauschii F775_17299 I 0.693
TRIUR3_32331 Triticum urartu TRIUR3_32331 I 0.693
Traes_4AL_D2D7703821 Triticum aestivum Traes_4AL_D2D7703821 I 0.693
Lus10006173.g Linum usitatissimum Lus10006173.g I 0.692
GSMUA_Achr11G12650_001 Musa acuminata GSMUA_Achr11G12650_001 N 0.691
Lus10041050.g Linum usitatissimum Lus10041050.g I 0.690
Ca_15064 Cicer arietinum Ca_15064 I 0.686
GSMUA_Achr8G16250_001 Musa acuminata GSMUA_Achr8G16250_001 I 0.684
VIT_18s0001g05890 Vitis vinifera VIT_18s0001g05890 I 0.680
Bo6g094210 Brassica oleracea Bo6g094210 I 0.678
Bra003924 Brassica rapa Bra003924 I 0.678