Bo5g136930 (Brassica oleracea)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Bo5g136930 T000853_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB2A
M06655_2.00 		Arabidopsis thaliana
NNNNHDHMACCGMCWYHNNNN
NNNNDRWGKCGGTKDHDNNNN		 Dap-seq
OMalley et al.(2016)
DREB2_col_a 		0.733 0.860
DREB2A
M06656_2.00 		Arabidopsis thaliana
NHNHMACCGMCWTWD
HWAWGKCGGTKDNDN		 Dap-seq
OMalley et al.(2016)
DREB2_colamp_a 		0.733 0.860
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo5g136930.1 AP2 79 130

Links

Other AP2 family TFs
Other Brassica oleracea TFs

19 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bra029889 Brassica rapa Bra029889 I 0.813
Bo1g141310 Brassica oleracea Bo1g141310 I 0.784
Bra034159 Brassica rapa Bra034159 I 0.774
Bra001386 Brassica rapa Bra001386 I 0.760
Bo3g063910 Brassica oleracea Bo3g063910 I 0.758
Thhalv10021161m.g Eutrema salsugineum Thhalv10021161m.g I 0.742
DREB2A Arabidopsis lyrata fgenesh2_kg.6__469__AT5G05410.1 I 0.739
Cagra.1504s0045 Capsella grandiflora Cagra.1504s0045 I 0.739
Carubv10001099m.g Capsella rubella Carubv10001099m.g I 0.739
Bostr.19424s1037 Boechera stricta Bostr.19424s1037 I 0.735
DREB2A Arabidopsis thaliana AT5G05410 D 0.733
Cagra.1655s0066 Capsella grandiflora Cagra.1655s0066 I 0.729
Carubv10013771m.g Capsella rubella Carubv10013771m.g I 0.729
Bostr.13129s0423 Boechera stricta Bostr.13129s0423 I 0.729
Bra028759 Brassica rapa Bra028759 I 0.721
Bo2g006960 Brassica oleracea Bo2g006960 I 0.721
DREB2B Arabidopsis lyrata fgenesh2_kg.3__1148__AT3G11020.1 I 0.717
Bra005852 Brassica rapa Bra005852 I 0.716
DREB2B Arabidopsis thaliana AT3G11020 I 0.680