Bo6g073020 (Brassica oleracea)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Bo6g073020 T000862_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
DREB2F
M06630_2.00
Arabidopsis thaliana
YCDCCRCCGCY

RGCGGYGGHGR
Dap-seq
OMalley et al.(2016)
AT3G57600_col_a
0.800 0.960
PK08602.1
M01098_2.00
Cannabis sativa
NYCACCGCYN

NRGCGGTGRN
PBM
Lambert et al.(2019)
pTH11421
0.759 0.900
DREB2G
M06662_2.00
Arabidopsis thaliana
DCCRCCGCYDYHDYH

DRHDRHRGCGGYGGH
Dap-seq
OMalley et al.(2016)
At5g18450_col_a
0.690 0.820
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo6g073020.1 AP2 20 71

Links

Other AP2 family TFs
Other Brassica oleracea TFs

84 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AMTR_s00007p00053050 Amborella trichopoda AMTR_s00007p00053050 I 0.687
AMTR_s00022p00250320 Amborella trichopoda AMTR_s00022p00250320 I 0.755
AMTR_s00039p00088760 Amborella trichopoda AMTR_s00039p00088760 I 0.687
Aquca_009_00282 Aquilegia coerulea Aquca_009_00282 I 0.759
fgenesh2_kg.5__2201__AT3G57600.1 Arabidopsis lyrata fgenesh2_kg.5__2201__AT3G57600.1 I 0.800
scaffold_601912.1 Arabidopsis lyrata scaffold_601912.1 I 0.690
DREB2G Arabidopsis thaliana AT5G18450 D 0.690
DREB2F Arabidopsis thaliana AT3G57600 D 0.800
Bostr.20903s0012 Boechera stricta Bostr.20903s0012 I 0.800
Bostr.26527s0367 Boechera stricta Bostr.26527s0367 I 0.690
BRADI1G72990 Brachypodium distachyon BRADI1G72990 I 0.765
Bo4g111040 Brassica oleracea Bo4g111040 I 0.804
Bo9g155940 Brassica oleracea Bo9g155940 I 0.690
Bo2g016490 Brassica oleracea Bo2g016490 I 0.681
Bo8g092010 Brassica oleracea Bo8g092010 I 0.802
Bra002159 Brassica rapa Bra002159 I 0.690
Bra007341 Brassica rapa Bra007341 I 0.802
Bra023674 Brassica rapa Bra023674 I 0.681
Bra014617 Brassica rapa Bra014617 I 0.804
PK08602.1 Cannabis sativa PK08602.1 D 0.759
Cagra.0578s0089 Capsella grandiflora Cagra.0578s0089 I 0.800
Cagra.0712s0008 Capsella grandiflora Cagra.0712s0008 I 0.683
Carubv10002425m.g Capsella rubella Carubv10002425m.g I 0.683
Carubv10017800m.g Capsella rubella Carubv10017800m.g I 0.800
evm.TU.supercontig_1288.2 Carica papaya evm.TU.supercontig_1288.2 I 0.700
evm.TU.supercontig_92.16 Carica papaya evm.TU.supercontig_92.16 I 0.764
Ca_07264 Cicer arietinum Ca_07264 I 0.769
Cla017778 Citrullus lanatus Cla017778 I 0.756
Ciclev10005549m.g Citrus clementina Ciclev10005549m.g I 0.772
orange1.1g042353m.g Citrus sinensis orange1.1g042353m.g I 0.772
Cucsa.336890 Cucumis sativus Cucsa.336890 I 0.764
Eucgr.A02390 Eucalyptus grandis Eucgr.A02390 I 0.773
Thhalv10015907m.g Eutrema salsugineum Thhalv10015907m.g I 0.690
Thhalv10006489m.g Eutrema salsugineum Thhalv10006489m.g I 0.812
gene26463-v1.0-hybrid Fragaria vesca gene26463-v1.0-hybrid I 0.769
GLYMA14G32210 Glycine max GLYMA14G32210 I 0.765
GLYMA02G31350 Glycine max GLYMA02G31350 I 0.765
GLYMA03G29530 Glycine max GLYMA03G29530 I 0.769
GLYMA10G21850 Glycine max GLYMA10G21850 I 0.765
GLYMA19G04461 Glycine max GLYMA19G04461 I 0.725
GLYMA19G32380 Glycine max GLYMA19G32380 I 0.769
Gorai.011G291900 Gossypium raimondii Gorai.011G291900 I 0.691
Gorai.007G359400 Gossypium raimondii Gorai.007G359400 I 0.766
LPERR03G04860 Leersia perrieri LPERR03G04860 I 0.759
Lus10011319.g Linum usitatissimum Lus10011319.g I 0.761
Lus10012210.g Linum usitatissimum Lus10012210.g I 0.761
chr1.CM0318.570.nd Lotus japonicus chr1.CM0318.570.nd I 0.756
MDP0000703626 Malus domestica MDP0000703626 I 0.763
MDP0000871361 Malus domestica MDP0000871361 I 0.763
cassava25887.m1 Manihot esculenta cassava25887.m1 I 0.680
cassava39243.m1 Manihot esculenta cassava39243.m1 I 0.769
cassava15495.m1 Manihot esculenta cassava15495.m1 I 0.769
MTR_7g092190 Medicago truncatula MTR_7g092190 I 0.769
OBART03G05550 Oryza barthii OBART03G05550 I 0.765
OGLUM03G05490 Oryza glumaepatula OGLUM03G05490 I 0.765
BGIOSGA011963 Oryza indica BGIOSGA011963 I 0.765
OMERI03G05220 Oryza meridionalis OMERI03G05220 I 0.765
ONIVA03G05350 Oryza nivara ONIVA03G05350 I 0.765
OPUNC03G05230 Oryza punctata OPUNC03G05230 I 0.765
ORUFI03G05330 Oryza rufipogon ORUFI03G05330 I 0.765
DREB2E Oryza sativa OS03G0174400 I 0.765
Pavir.Ib00517 Panicum virgatum Pavir.Ib00517 I 0.765
Pavir.Ia04341 Panicum virgatum Pavir.Ia04341 I 0.765
e_gw1.292.36.1 Physcomitrella patens e_gw1.292.36.1 I 0.708
e_gw1.162.74.1 Physcomitrella patens e_gw1.162.74.1 I 0.727
POPTR_0016s05360 Populus trichocarpa POPTR_0016s05360 I 0.769
POPTR_0006s05320 Populus trichocarpa POPTR_0006s05320 I 0.753
Pm025865 Prunus mume Pm025865 I 0.763
PRUPE_ppa009616mg Prunus persica PRUPE_ppa009616mg I 0.763
27810.m000639 Ricinus communis 27810.m000639 I 0.769
SapurV1A.0133s0330 Salix purpurea SapurV1A.0133s0330 I 0.747
SapurV1A.0018s0040 Salix purpurea SapurV1A.0018s0040 I 0.769
SELMODRAFT_38502 Selaginella moellendorffii SELMODRAFT_38502 I 0.744
SELMODRAFT_38483 Selaginella moellendorffii SELMODRAFT_38483 I 0.684
SELMODRAFT_27203 Selaginella moellendorffii SELMODRAFT_27203 I 0.684
SELMODRAFT_105485 Selaginella moellendorffii SELMODRAFT_105485 I 0.744
Solyc10g080310.1 Solanum lycopersicum Solyc10g080310.1 I 0.756
PGSC0003DMG400023717 Solanum tuberosum PGSC0003DMG400023717 I 0.769
TCM_024756 Theobroma cacao TCM_024756 I 0.772
Traes_4AS_0D75149B5 Triticum aestivum Traes_4AS_0D75149B5 I 0.755
VIT_08s0007g08150 Vitis vinifera VIT_08s0007g08150 I 0.769
GRMZM2G419901 Zea mays GRMZM2G419901 I 0.765
GRMZM2G399098 Zea mays GRMZM2G399098 I 0.765
GRMZM2G376255 Zea mays GRMZM2G376255 I 0.755