Bo6g086740 (Brassica oleracea)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Bo6g086740 T000868_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF018
M00842_2.00
Arabidopsis thaliana
HRCCGDCMN

NKGHCGGYD
PBM
Franco-Zorrilla et al.(2014)
ORA47
0.819 0.960
ERF018
M01610_2.00
Arabidopsis thaliana
NRCCGNCHN

NDGNCGGYN
PBM
Weirauch et al.(2014)
pTH7215
0.819 0.960
ERF017
M06568_2.00
Arabidopsis thaliana
NHNYCRCCGWCMWH

DWKGWCGGYGRNDN
Dap-seq
OMalley et al.(2016)
At1g19210_col_a
0.795 0.900
ERF017
M06569_2.00
Arabidopsis thaliana
NNNHNNCRCCGWCMW

WKGWCGGYGNNDNNN
Dap-seq
OMalley et al.(2016)
At1g19210_colamp_a
0.795 0.900
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo6g086740.1 AP2 20 71

Links

Other AP2 family TFs
Other Brassica oleracea TFs

153 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AMTR_s00007p00268280 Amborella trichopoda AMTR_s00007p00268280 I 0.780
Aquca_076_00040 Aquilegia coerulea Aquca_076_00040 I 0.677
Aquca_076_00039 Aquilegia coerulea Aquca_076_00039 I 0.782
scaffold_602234.1 Arabidopsis lyrata scaffold_602234.1 I 0.739
fgenesh2_kg.1__2098__AT1G19210.1 Arabidopsis lyrata fgenesh2_kg.1__2098__AT1G19210.1 I 0.795
ORA47 Arabidopsis lyrata fgenesh2_kg.2__1761__AT1G74930.1 I 0.819
ERF016 Arabidopsis thaliana AT5G21960 I 0.733
ERF018 Arabidopsis thaliana AT1G74930 D 0.819
ERF017 Arabidopsis thaliana AT1G19210 D 0.795
Bostr.7128s0526 Boechera stricta Bostr.7128s0526 I 0.771
Bostr.3288s0141 Boechera stricta Bostr.3288s0141 I 0.819
Bostr.26527s0082 Boechera stricta Bostr.26527s0082 I 0.739
Bo8g068370 Brassica oleracea Bo8g068370 I 0.780
Bo6g119120 Brassica oleracea Bo6g119120 I 0.807
Bo2g023630 Brassica oleracea Bo2g023630 I 0.756
Bo3g015600 Brassica oleracea Bo3g015600 I 0.741
Bo8g102870 Brassica oleracea Bo8g102870 I 0.805
Bo9g149820 Brassica oleracea Bo9g149820 I 0.739
Bra031069 Brassica rapa Bra031069 I 0.805
Bra002377 Brassica rapa Bra002377 I 0.739
Bra025719 Brassica rapa Bra025719 I 0.769
Bra015882 Brassica rapa Bra015882 I 0.802
Bra016518 Brassica rapa Bra016518 I 0.780
Bra006599 Brassica rapa Bra006599 I 0.741
Bra003780 Brassica rapa Bra003780 I 0.819
Bra020162 Brassica rapa Bra020162 I 0.753
PK18548.1 Cannabis sativa PK18548.1 I 0.740
Cagra.0402s0035 Capsella grandiflora Cagra.0402s0035 I 0.827
Cagra.1961s0079 Capsella grandiflora Cagra.1961s0079 I 0.795
Carubv10020965m.g Capsella rubella Carubv10020965m.g I 0.827
Carubv10001903m.g Capsella rubella Carubv10001903m.g I 0.739
Carubv10011394m.g Capsella rubella Carubv10011394m.g I 0.795
evm.TU.supercontig_266.5 Carica papaya evm.TU.supercontig_266.5 I 0.791
Ca_19297 Cicer arietinum Ca_19297 I 0.764
Ca_19295 Cicer arietinum Ca_19295 I 0.758
Ca_09124 Cicer arietinum Ca_09124 I 0.779
Ca_01683 Cicer arietinum Ca_01683 I 0.755
Ca_19296 Cicer arietinum Ca_19296 I 0.753
Cla007584 Citrullus lanatus Cla007584 I 0.780
Cla011318 Citrullus lanatus Cla011318 I 0.757
Cla022291 Citrullus lanatus Cla022291 I 0.739
Ciclev10009540m.g Citrus clementina Ciclev10009540m.g I 0.779
Ciclev10010348m.g Citrus clementina Ciclev10010348m.g I 0.788
orange1.1g029068m.g Citrus sinensis orange1.1g029068m.g I 0.779
Cucsa.271180 Cucumis sativus Cucsa.271180 I 0.760
Cucsa.141980 Cucumis sativus Cucsa.141980 I 0.757
Cucsa.055920 Cucumis sativus Cucsa.055920 I 0.739
Eucgr.C00780 Eucalyptus grandis Eucgr.C00780 I 0.796
Eucgr.C03297 Eucalyptus grandis Eucgr.C03297 I 0.809
Eucgr.C03175 Eucalyptus grandis Eucgr.C03175 I 0.719
Thhalv10015465m.g Eutrema salsugineum Thhalv10015465m.g I 0.733
Thhalv10019652m.g Eutrema salsugineum Thhalv10019652m.g I 0.800
Thhalv10009812m.g Eutrema salsugineum Thhalv10009812m.g I 0.811
gene12919-v1.0-hybrid Fragaria vesca gene12919-v1.0-hybrid I 0.792
GLYMA17G33535 Glycine max GLYMA17G33535 I 0.759
GLYMA15G19910 Glycine max GLYMA15G19910 I 0.774
GLYMA14G12505 Glycine max GLYMA14G12505 I 0.750
GLYMA13G17250 Glycine max GLYMA13G17250 I 0.773
GLYMA09G08330 Glycine max GLYMA09G08330 I 0.777
GLYMA06G06101 Glycine max GLYMA06G06101 I 0.755
GLYMA04G06095 Glycine max GLYMA04G06095 I 0.755
GLYMA17G05240 Glycine max GLYMA17G05240 I 0.776
Gorai.004G285200 Gossypium raimondii Gorai.004G285200 I 0.728
Gorai.001G016800 Gossypium raimondii Gorai.001G016800 I 0.781
Gorai.001G019100 Gossypium raimondii Gorai.001G019100 I 0.788
Gorai.004G285900 Gossypium raimondii Gorai.004G285900 I 0.766
Gorai.010G091100 Gossypium raimondii Gorai.010G091100 I 0.779
Gorai.013G222700 Gossypium raimondii Gorai.013G222700 I 0.769
LPERR08G14000 Leersia perrieri LPERR08G14000 I 0.682
LPERR02G28660 Leersia perrieri LPERR02G28660 I 0.746
Lus10009798.g Linum usitatissimum Lus10009798.g I 0.776
Lus10033420.g Linum usitatissimum Lus10033420.g I 0.780
Lus10034885.g Linum usitatissimum Lus10034885.g I 0.780
Lus10038082.g Linum usitatissimum Lus10038082.g I 0.776
chr5.CM0040.40.nd Lotus japonicus chr5.CM0040.40.nd I 0.770
chr1.CM0133.1010.nc Lotus japonicus chr1.CM0133.1010.nc I 0.721
chr6.CM0420.30.nd Lotus japonicus chr6.CM0420.30.nd I 0.755
MDP0000649022 Malus domestica MDP0000649022 I 0.782
MDP0000704216 Malus domestica MDP0000704216 I 0.788
cassava10604.m1 Manihot esculenta cassava10604.m1 I 0.789
cassava20547.m1 Manihot esculenta cassava20547.m1 I 0.780
cassava25057.valid.m1 Manihot esculenta cassava25057.valid.m1 I 0.788
MTR_3g105510 Medicago truncatula MTR_3g105510 I 0.723
MTR_7g028925 Medicago truncatula MTR_7g028925 I 0.685
MTR_3g105480 Medicago truncatula MTR_3g105480 I 0.723
MTR_2g043050 Medicago truncatula MTR_2g043050 I 0.770
MTR_1g014820 Medicago truncatula MTR_1g014820 I 0.781
MTR_2g043040 Medicago truncatula MTR_2g043040 I 0.756
MTR_2g043030 Medicago truncatula MTR_2g043030 I 0.756
MTR_2g043020 Medicago truncatula MTR_2g043020 I 0.725
MTR_1g014780 Medicago truncatula MTR_1g014780 I 0.715
MTR_1g014860 Medicago truncatula MTR_1g014860 I 0.781
MTR_1g014800 Medicago truncatula MTR_1g014800 I 0.773
mgf021940m Mimulus guttatus mgf021940m I 0.793
mgf024162m Mimulus guttatus mgf024162m I 0.799
mgf025452m Mimulus guttatus mgf025452m I 0.781
GSMUA_AchrUn_randomG02200_001 Musa acuminata GSMUA_AchrUn_randomG02200_001 I 0.719
GSMUA_Achr9G14360_001 Musa acuminata GSMUA_Achr9G14360_001 I 0.693
GSMUA_Achr5G05160_001 Musa acuminata GSMUA_Achr5G05160_001 I 0.721
OBART06G06190 Oryza barthii OBART06G06190 I 0.698
OBART08G16950 Oryza barthii OBART08G16950 I 0.682
OB08G24280 Oryza brachyantha OB08G24280 I 0.682
ORGLA02G0301600 Oryza glaberrima ORGLA02G0301600 I 0.710
ORGLA06G0057200 Oryza glaberrima ORGLA06G0057200 I 0.698
OGLUM06G06520 Oryza glumaepatula OGLUM06G06520 I 0.698
OGLUM08G17690 Oryza glumaepatula OGLUM08G17690 I 0.682
OGLUM02G35980 Oryza glumaepatula OGLUM02G35980 I 0.710
BGIOSGA028781 Oryza indica BGIOSGA028781 I 0.682
BGIOSGA005486 Oryza indica BGIOSGA005486 I 0.710
BGIOSGA022471 Oryza indica BGIOSGA022471 I 0.699
OMERI03G32210 Oryza meridionalis OMERI03G32210 I 0.698
OMERI01G37050 Oryza meridionalis OMERI01G37050 I 0.710
ONIVA02G36910 Oryza nivara ONIVA02G36910 I 0.710
ONIVA06G07190 Oryza nivara ONIVA06G07190 I 0.698
ONIVA08G18470 Oryza nivara ONIVA08G18470 I 0.682
OPUNC08G14840 Oryza punctata OPUNC08G14840 I 0.682
OPUNC02G32160 Oryza punctata OPUNC02G32160 I 0.710
ORUFI02G36340 Oryza rufipogon ORUFI02G36340 I 0.710
ORUFI08G18850 Oryza rufipogon ORUFI08G18850 I 0.682
ORUFI06G06480 Oryza rufipogon ORUFI06G06480 I 0.699
OS08G0454000 Oryza sativa OS08G0454000 I 0.682
OS02G0781300 Oryza sativa OS02G0781300 I 0.710
Pavir.Fa00741 Panicum virgatum Pavir.Fa00741 I 0.682
Pavir.Fb01602 Panicum virgatum Pavir.Fb01602 I 0.682
Pavir.J00593 Panicum virgatum Pavir.J00593 I 0.761
Pavir.Aa00296 Panicum virgatum Pavir.Aa00296 I 0.759
POPTR_0006s14090 Populus trichocarpa POPTR_0006s14090 I 0.784
POPTR_0006s14100 Populus trichocarpa POPTR_0006s14100 I 0.788
POPTR_0006s23480 Populus trichocarpa POPTR_0006s23480 I 0.793
POPTR_0018s08320 Populus trichocarpa POPTR_0018s08320 I 0.777
Pm027117 Prunus mume Pm027117 I 0.786
PRUPE_ppa011336mg Prunus persica PRUPE_ppa011336mg I 0.786
29739.m003716 Ricinus communis 29739.m003716 I 0.786
29739.m003647 Ricinus communis 29739.m003647 I 0.769
SapurV1A.2229s0010 Salix purpurea SapurV1A.2229s0010 I 0.793
SapurV1A.0521s0050 Salix purpurea SapurV1A.0521s0050 I 0.779
SapurV1A.0373s0040 Salix purpurea SapurV1A.0373s0040 I 0.793
SapurV1A.0057s0300 Salix purpurea SapurV1A.0057s0300 I 0.789
Si015027m.g Setaria italica Si015027m.g I 0.682
Si008104m.g Setaria italica Si008104m.g I 0.732
Si019636m.g Setaria italica Si019636m.g I 0.759
Solyc12g009240.1 Solanum lycopersicum Solyc12g009240.1 I 0.785
Solyc06g054630.1 Solanum lycopersicum Solyc06g054630.1 I 0.738
PGSC0003DMG400030781 Solanum tuberosum PGSC0003DMG400030781 I 0.738
PGSC0003DMG400002899 Solanum tuberosum PGSC0003DMG400002899 I 0.785
TCM_037415 Theobroma cacao TCM_037415 I 0.778
TCM_037486 Theobroma cacao TCM_037486 I 0.800
Traes_6AL_E6DAE246D Triticum aestivum Traes_6AL_E6DAE246D I 0.710
Traes_6DL_FA861D610 Triticum aestivum Traes_6DL_FA861D610 I 0.737
ORA47 Vitis vinifera VIT_04s0008g02230 I 0.802
VIT_11s0016g00660 Vitis vinifera VIT_11s0016g00660 I 0.782
GRMZM2G163745 Zea mays GRMZM2G163745 I 0.682
GRMZM2G097081 Zea mays GRMZM2G097081 I 0.752