Bo6g119120 (Brassica oleracea)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Bo6g119120 T000877_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF018
M00842_2.00 		Arabidopsis thaliana
HRCCGDCMN
NKGHCGGYD		 PBM
Franco-Zorrilla et al.(2014)
ORA47 		0.815 0.940
ERF018
M01610_2.00 		Arabidopsis thaliana
NRCCGNCHN
NDGNCGGYN		 PBM
Weirauch et al.(2014)
pTH7215 		0.815 0.940
ERF017
M06568_2.00 		Arabidopsis thaliana
NHNYCRCCGWCMWH
DWKGWCGGYGRNDN		 Dap-seq
OMalley et al.(2016)
At1g19210_col_a 		0.798 0.920
ERF017
M06569_2.00 		Arabidopsis thaliana
NNNHNNCRCCGWCMW
WKGWCGGYGNNDNNN		 Dap-seq
OMalley et al.(2016)
At1g19210_colamp_a 		0.798 0.920
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo6g119120.1 AP2 21 72

Links

Other AP2 family TFs
Other Brassica oleracea TFs

155 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ERF018 Arabidopsis thaliana AT1G74930 D 0.815
ORA47 Arabidopsis lyrata fgenesh2_kg.2__1761__AT1G74930.1 I 0.815
Bostr.3288s0141 Boechera stricta Bostr.3288s0141 I 0.815
Bra015882 Brassica rapa Bra015882 I 0.811
Bo8g102870 Brassica oleracea Bo8g102870 I 0.810
Bra031069 Brassica rapa Bra031069 I 0.810
mgf024162m Mimulus guttatus mgf024162m I 0.808
Thhalv10009812m.g Eutrema salsugineum Thhalv10009812m.g I 0.807
Bra003780 Brassica rapa Bra003780 I 0.807
Carubv10020965m.g Capsella rubella Carubv10020965m.g I 0.807
Bo6g086740 Brassica oleracea Bo6g086740 I 0.807
Cagra.0402s0035 Capsella grandiflora Cagra.0402s0035 I 0.807
ORA47 Vitis vinifera VIT_04s0008g02230 I 0.806
Eucgr.C00780 Eucalyptus grandis Eucgr.C00780 I 0.800
mgf021940m Mimulus guttatus mgf021940m I 0.798
fgenesh2_kg.1__2098__AT1G19210.1 Arabidopsis lyrata fgenesh2_kg.1__2098__AT1G19210.1 I 0.798
SapurV1A.0373s0040 Salix purpurea SapurV1A.0373s0040 I 0.798
Carubv10011394m.g Capsella rubella Carubv10011394m.g I 0.798
Cagra.1961s0079 Capsella grandiflora Cagra.1961s0079 I 0.798
SapurV1A.2229s0010 Salix purpurea SapurV1A.2229s0010 I 0.798
SapurV1A.0057s0300 Salix purpurea SapurV1A.0057s0300 I 0.798
ERF017 Arabidopsis thaliana AT1G19210 D 0.798
POPTR_0006s23480 Populus trichocarpa POPTR_0006s23480 I 0.798
Eucgr.C03297 Eucalyptus grandis Eucgr.C03297 I 0.798
Thhalv10019652m.g Eutrema salsugineum Thhalv10019652m.g I 0.797
cassava10604.m1 Manihot esculenta cassava10604.m1 I 0.797
gene12919-v1.0-hybrid Fragaria vesca gene12919-v1.0-hybrid I 0.796
TCM_037486 Theobroma cacao TCM_037486 I 0.796
evm.TU.supercontig_266.5 Carica papaya evm.TU.supercontig_266.5 I 0.795
POPTR_0006s14100 Populus trichocarpa POPTR_0006s14100 I 0.793
MDP0000704216 Malus domestica MDP0000704216 I 0.793
cassava25057.valid.m1 Manihot esculenta cassava25057.valid.m1 I 0.793
Ciclev10010348m.g Citrus clementina Ciclev10010348m.g I 0.792
Gorai.001G019100 Gossypium raimondii Gorai.001G019100 I 0.790
PRUPE_ppa011336mg Prunus persica PRUPE_ppa011336mg I 0.790
29739.m003716 Ricinus communis 29739.m003716 I 0.790
Pm027117 Prunus mume Pm027117 I 0.790
cassava20547.m1 Manihot esculenta cassava20547.m1 I 0.788
MDP0000649022 Malus domestica MDP0000649022 I 0.787
Aquca_076_00039 Aquilegia coerulea Aquca_076_00039 I 0.787
POPTR_0006s14090 Populus trichocarpa POPTR_0006s14090 I 0.786
VIT_11s0016g00660 Vitis vinifera VIT_11s0016g00660 I 0.786
Gorai.001G016800 Gossypium raimondii Gorai.001G016800 I 0.786
Bo8g068370 Brassica oleracea Bo8g068370 I 0.785
Cla007584 Citrullus lanatus Cla007584 I 0.785
AMTR_s00007p00268280 Amborella trichopoda AMTR_s00007p00268280 I 0.785
mgf025452m Mimulus guttatus mgf025452m I 0.785
Bra016518 Brassica rapa Bra016518 I 0.785
orange1.1g029068m.g Citrus sinensis orange1.1g029068m.g I 0.784
Ca_09124 Cicer arietinum Ca_09124 I 0.784
Lus10033420.g Linum usitatissimum Lus10033420.g I 0.784
Ciclev10009540m.g Citrus clementina Ciclev10009540m.g I 0.784
Lus10034885.g Linum usitatissimum Lus10034885.g I 0.784
SapurV1A.0521s0050 Salix purpurea SapurV1A.0521s0050 I 0.784
TCM_037415 Theobroma cacao TCM_037415 I 0.783
Gorai.010G091100 Gossypium raimondii Gorai.010G091100 I 0.783
GLYMA13G17250 Glycine max GLYMA13G17250 I 0.782
POPTR_0018s08320 Populus trichocarpa POPTR_0018s08320 I 0.782
Lus10038082.g Linum usitatissimum Lus10038082.g I 0.781
Lus10009798.g Linum usitatissimum Lus10009798.g I 0.781
GLYMA17G05240 Glycine max GLYMA17G05240 I 0.780
MTR_1g014800 Medicago truncatula MTR_1g014800 I 0.777
Solyc12g009240.1 Solanum lycopersicum Solyc12g009240.1 I 0.774
PGSC0003DMG400002899 Solanum tuberosum PGSC0003DMG400002899 I 0.774
Gorai.013G222700 Gossypium raimondii Gorai.013G222700 I 0.774
chr5.CM0040.40.nd Lotus japonicus chr5.CM0040.40.nd I 0.774
Bra025719 Brassica rapa Bra025719 I 0.774
Bostr.7128s0526 Boechera stricta Bostr.7128s0526 I 0.773
MTR_1g014860 Medicago truncatula MTR_1g014860 I 0.770
MTR_1g014820 Medicago truncatula MTR_1g014820 I 0.770
Gorai.004G285900 Gossypium raimondii Gorai.004G285900 I 0.770
Pavir.J00593 Panicum virgatum Pavir.J00593 I 0.767
GLYMA09G08330 Glycine max GLYMA09G08330 I 0.766
29739.m003647 Ricinus communis 29739.m003647 I 0.765
Cucsa.271180 Cucumis sativus Cucsa.271180 I 0.764
GLYMA17G33535 Glycine max GLYMA17G33535 I 0.763
Si019636m.g Setaria italica Si019636m.g I 0.763
Pavir.Aa00296 Panicum virgatum Pavir.Aa00296 I 0.763
GLYMA15G19910 Glycine max GLYMA15G19910 I 0.762
Cla011318 Citrullus lanatus Cla011318 I 0.762
Cucsa.141980 Cucumis sativus Cucsa.141980 I 0.762
GLYMA04G06095 Glycine max GLYMA04G06095 I 0.760
GLYMA06G06101 Glycine max GLYMA06G06101 I 0.760
Ca_01683 Cicer arietinum Ca_01683 I 0.760
MTR_2g043050 Medicago truncatula MTR_2g043050 I 0.759
GRMZM2G097081 Zea mays GRMZM2G097081 I 0.757
Bo2g023630 Brassica oleracea Bo2g023630 I 0.756
GLYMA14G12505 Glycine max GLYMA14G12505 I 0.755
Bra020162 Brassica rapa Bra020162 I 0.754
LPERR02G28660 Leersia perrieri LPERR02G28660 I 0.751
Ca_19295 Cicer arietinum Ca_19295 I 0.747
chr6.CM0420.30.nd Lotus japonicus chr6.CM0420.30.nd I 0.746
PK18548.1 Cannabis sativa PK18548.1 I 0.746
MTR_2g043030 Medicago truncatula MTR_2g043030 I 0.745
Ca_19297 Cicer arietinum Ca_19297 I 0.745
MTR_2g043040 Medicago truncatula MTR_2g043040 I 0.745
Ca_19296 Cicer arietinum Ca_19296 I 0.742
Solyc06g054630.1 Solanum lycopersicum Solyc06g054630.1 I 0.742
PGSC0003DMG400030781 Solanum tuberosum PGSC0003DMG400030781 I 0.742
Traes_6DL_FA861D610 Triticum aestivum Traes_6DL_FA861D610 I 0.742
Bra006599 Brassica rapa Bra006599 I 0.741
Bo3g015600 Brassica oleracea Bo3g015600 I 0.741
Carubv10001903m.g Capsella rubella Carubv10001903m.g I 0.739
Bostr.26527s0082 Boechera stricta Bostr.26527s0082 I 0.739
scaffold_602234.1 Arabidopsis lyrata scaffold_602234.1 I 0.739
Bo9g149820 Brassica oleracea Bo9g149820 I 0.739
Bra002377 Brassica rapa Bra002377 I 0.739
Si008104m.g Setaria italica Si008104m.g I 0.737
Thhalv10015465m.g Eutrema salsugineum Thhalv10015465m.g I 0.733
ERF016 Arabidopsis thaliana AT5G21960 I 0.733
Gorai.004G285200 Gossypium raimondii Gorai.004G285200 I 0.732
Cla022291 Citrullus lanatus Cla022291 I 0.728
Cucsa.055920 Cucumis sativus Cucsa.055920 I 0.728
MTR_3g105510 Medicago truncatula MTR_3g105510 I 0.727
MTR_3g105480 Medicago truncatula MTR_3g105480 I 0.727
chr1.CM0133.1010.nc Lotus japonicus chr1.CM0133.1010.nc I 0.726
GSMUA_Achr5G05160_001 Musa acuminata GSMUA_Achr5G05160_001 I 0.725
GSMUA_AchrUn_randomG02200_001 Musa acuminata GSMUA_AchrUn_randomG02200_001 I 0.724
Eucgr.C03175 Eucalyptus grandis Eucgr.C03175 I 0.723
Traes_6AL_E6DAE246D Triticum aestivum Traes_6AL_E6DAE246D I 0.716
MTR_2g043020 Medicago truncatula MTR_2g043020 I 0.714
ONIVA02G36910 Oryza nivara ONIVA02G36910 I 0.714
OMERI01G37050 Oryza meridionalis OMERI01G37050 I 0.714
OS02G0781300 Oryza sativa OS02G0781300 I 0.714
OGLUM02G35980 Oryza glumaepatula OGLUM02G35980 I 0.714
OPUNC02G32160 Oryza punctata OPUNC02G32160 I 0.714
ORUFI02G36340 Oryza rufipogon ORUFI02G36340 I 0.714
ORGLA02G0301600 Oryza glaberrima ORGLA02G0301600 I 0.714
BGIOSGA005486 Oryza indica BGIOSGA005486 I 0.714
MTR_1g014780 Medicago truncatula MTR_1g014780 I 0.704
GSMUA_Achr9G14360_001 Musa acuminata GSMUA_Achr9G14360_001 I 0.698
Pavir.Fa00741 Panicum virgatum Pavir.Fa00741 I 0.686
Pavir.Fb01602 Panicum virgatum Pavir.Fb01602 I 0.686
Si015027m.g Setaria italica Si015027m.g I 0.686
ORUFI08G18850 Oryza rufipogon ORUFI08G18850 I 0.686
BGIOSGA028781 Oryza indica BGIOSGA028781 I 0.686
GRMZM2G163745 Zea mays GRMZM2G163745 I 0.686
LPERR08G14000 Leersia perrieri LPERR08G14000 I 0.686
OS08G0454000 Oryza sativa OS08G0454000 I 0.686
OPUNC08G14840 Oryza punctata OPUNC08G14840 I 0.686
OBART08G16950 Oryza barthii OBART08G16950 I 0.686
OGLUM08G17690 Oryza glumaepatula OGLUM08G17690 I 0.686
OB08G24280 Oryza brachyantha OB08G24280 I 0.686
ONIVA08G18470 Oryza nivara ONIVA08G18470 I 0.686
Aquca_076_00040 Aquilegia coerulea Aquca_076_00040 I 0.681
ORUFI06G06480 Oryza rufipogon ORUFI06G06480 I 0.680
TRAES3BF084200010CFD_g Triticum aestivum TRAES3BF084200010CFD_g I 0.680
BGIOSGA022471 Oryza indica BGIOSGA022471 I 0.680
OBART06G06190 Oryza barthii OBART06G06190 I 0.679
ONIVA06G07190 Oryza nivara ONIVA06G07190 I 0.679
ORGLA06G0057200 Oryza glaberrima ORGLA06G0057200 I 0.679
OMERI03G32210 Oryza meridionalis OMERI03G32210 I 0.679
OGLUM06G06520 Oryza glumaepatula OGLUM06G06520 I 0.679
F775_23111 Aegilops tauschii F775_23111 I 0.678
BRADI3G37544 Brachypodium distachyon BRADI3G37544 I 0.677