Bo7g059990 (Brassica oleracea)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Bo7g059990 T000891_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF012
M06570_2.00
Arabidopsis thaliana
NHNNHNHHDHHDCCACCGHC

GDCGGTGGHDDHDDNDNNDN
Dap-seq
OMalley et al.(2016)
DREB26_col_a
0.747 0.940
ERF014
M06581_2.00
Arabidopsis thaliana
YCDYCDCCACCGHCD

HGDCGGTGGHGRHGR
Dap-seq
OMalley et al.(2016)
AT1G44830_col_a
0.730 0.900
ERF013
M06601_2.00
Arabidopsis thaliana
DYCACCGHCAHHDNHNNNNNN

NNNNNNDNHDDTGDCGGTGRH
Dap-seq
OMalley et al.(2016)
At1g77640_col_a
0.710 0.900
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo7g059990.1 AP2 38 89

Links

Other AP2 family TFs
Other Brassica oleracea TFs

99 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Cagra.2306s0038 Capsella grandiflora Cagra.2306s0038 I 0.747
DREB26 Arabidopsis lyrata fgenesh2_kg.1__2381__AT1G21910.1 I 0.747
Bostr.12659s0041 Boechera stricta Bostr.12659s0041 I 0.747
Carubv10010179m.g Capsella rubella Carubv10010179m.g I 0.747
ERF012 Arabidopsis thaliana AT1G21910 D 0.747
Thhalv10008639m.g Eutrema salsugineum Thhalv10008639m.g I 0.747
Bra036022 Brassica rapa Bra036022 I 0.747
Bo5g034880 Brassica oleracea Bo5g034880 I 0.745
Bra015660 Brassica rapa Bra015660 I 0.738
Bo6g121400 Brassica oleracea Bo6g121400 I 0.738
Thhalv10019045m.g Eutrema salsugineum Thhalv10019045m.g I 0.738
Bo8g071150 Brassica oleracea Bo8g071150 I 0.737
Bra016400 Brassica rapa Bra016400 I 0.737
PGSC0003DMG400000910 Solanum tuberosum PGSC0003DMG400000910 I 0.736
Solyc11g012980.1 Solanum lycopersicum Solyc11g012980.1 I 0.736
Cucsa.365220 Cucumis sativus Cucsa.365220 I 0.730
cassava28944.valid.m1 Manihot esculenta cassava28944.valid.m1 I 0.730
Cucsa.372760 Cucumis sativus Cucsa.372760 I 0.730
mgf021045m Mimulus guttatus mgf021045m I 0.730
Cagra.1192s0001 Capsella grandiflora Cagra.1192s0001 I 0.730
Bostr.12302s0095 Boechera stricta Bostr.12302s0095 I 0.730
Pm004870 Prunus mume Pm004870 I 0.730
Cla023512 Citrullus lanatus Cla023512 I 0.730
TCM_035077 Theobroma cacao TCM_035077 I 0.730
Bra040309 Brassica rapa Bra040309 I 0.730
VIT_18s0001g03240 Vitis vinifera VIT_18s0001g03240 I 0.730
Ca_25824 Cicer arietinum Ca_25824 I 0.730
Cla014165 Citrullus lanatus Cla014165 I 0.730
Bo6g004620 Brassica oleracea Bo6g004620 I 0.730
Carubv10010259m.g Capsella rubella Carubv10010259m.g I 0.730
MDP0000923690 Malus domestica MDP0000923690 I 0.730
MDP0000120147 Malus domestica MDP0000120147 I 0.730
SapurV1A.0010s0960 Salix purpurea SapurV1A.0010s0960 I 0.730
Thhalv10011778m.g Eutrema salsugineum Thhalv10011778m.g I 0.730
ERF014 Arabidopsis thaliana AT1G44830 D 0.730
Lus10028032.g Linum usitatissimum Lus10028032.g I 0.730
Lus10003740.g Linum usitatissimum Lus10003740.g I 0.730
gene11145-v1.0-hybrid Fragaria vesca gene11145-v1.0-hybrid I 0.730
evm.TU.supercontig_36.41 Carica papaya evm.TU.supercontig_36.41 I 0.730
Gorai.002G220900 Gossypium raimondii Gorai.002G220900 I 0.730
Gorai.009G244500 Gossypium raimondii Gorai.009G244500 I 0.730
Gorai.010G048900 Gossypium raimondii Gorai.010G048900 I 0.730
PRUPE_ppa010649mg Prunus persica PRUPE_ppa010649mg I 0.730
29908.m006165 Ricinus communis 29908.m006165 I 0.730
MTR_3g072610 Medicago truncatula MTR_3g072610 I 0.730
POPTR_0002s08610 Populus trichocarpa POPTR_0002s08610 I 0.730
GLYMA13G02860 Glycine max GLYMA13G02860 I 0.730
GLYMA14G22970 Glycine max GLYMA14G22970 I 0.730
GLYMA06G11700 Glycine max GLYMA06G11700 I 0.730
fgenesh2_kg.1__3777__AT1G44830.1 Arabidopsis lyrata fgenesh2_kg.1__3777__AT1G44830.1 I 0.730
GLYMA04G43040 Glycine max GLYMA04G43040 I 0.730
MTR_5g058470 Medicago truncatula MTR_5g058470 I 0.730
Aquca_014_00181 Aquilegia coerulea Aquca_014_00181 I 0.729
Bra012298 Brassica rapa Bra012298 I 0.728
orange1.1g039680m.g Citrus sinensis orange1.1g039680m.g I 0.723
Ciclev10002294m.g Citrus clementina Ciclev10002294m.g I 0.723
cassava44357.m1 Manihot esculenta cassava44357.m1 I 0.720
GSMUA_Achr8G23240_001 Musa acuminata GSMUA_Achr8G23240_001 I 0.717
SapurV1A.0105s0160 Salix purpurea SapurV1A.0105s0160 I 0.717
SapurV1A.3198s0010 Salix purpurea SapurV1A.3198s0010 I 0.717
GRMZM2G011110 Zea mays GRMZM2G011110 I 0.716
BGIOSGA005542 Oryza indica BGIOSGA005542 I 0.716
Pavir.J02555 Panicum virgatum Pavir.J02555 I 0.716
Sb04g034290 Sorghum bicolor Sb04g034290 I 0.716
BRADI3G57867 Brachypodium distachyon BRADI3G57867 I 0.716
LPERR06G06370 Leersia perrieri LPERR06G06370 I 0.716
OMERI02G32260 Oryza meridionalis OMERI02G32260 I 0.716
F775_17148 Aegilops tauschii F775_17148 I 0.716
ONIVA02G33600 Oryza nivara ONIVA02G33600 I 0.716
OPUNC02G31280 Oryza punctata OPUNC02G31280 I 0.716
OGLUM02G34320 Oryza glumaepatula OGLUM02G34320 I 0.716
OS02G0767800 Oryza sativa OS02G0767800 I 0.716
POPTR_0005s15830 Populus trichocarpa POPTR_0005s15830 I 0.715
mgf023290m Mimulus guttatus mgf023290m I 0.714
ERF013 Arabidopsis thaliana AT1G77640 D 0.710
fgenesh2_kg.2__2058__AT1G77640.1 Arabidopsis lyrata fgenesh2_kg.2__2058__AT1G77640.1 I 0.710
Bostr.20129s0200 Boechera stricta Bostr.20129s0200 I 0.710
LPERR02G27720 Leersia perrieri LPERR02G27720 I 0.709
BRADI1G46120 Brachypodium distachyon BRADI1G46120 I 0.708
F775_20580 Aegilops tauschii F775_20580 I 0.707
Pavir.J26231 Panicum virgatum Pavir.J26231 I 0.707
Pavir.J23882 Panicum virgatum Pavir.J23882 I 0.707
GSMUA_Achr10G30100_001 Musa acuminata GSMUA_Achr10G30100_001 I 0.707
Si007977m.g Setaria italica Si007977m.g I 0.707
GSMUA_Achr10G25270_001 Musa acuminata GSMUA_Achr10G25270_001 I 0.707
MLOC_70931 Hordeum vulgare MLOC_70931 I 0.706
Sb10g006980 Sorghum bicolor Sb10g006980 I 0.703
MDP0000319736 Malus domestica MDP0000319736 I 0.702
Cagra.0096s0069 Capsella grandiflora Cagra.0096s0069 I 0.699
Carubv10020777m.g Capsella rubella Carubv10020777m.g I 0.699
PK16069.1 Cannabis sativa PK16069.1 I 0.694
LjT35E05.90.nd Lotus japonicus LjT35E05.90.nd I 0.692
chr1.LjB21G05.120.nc Lotus japonicus chr1.LjB21G05.120.nc I 0.692
Sb01g040280 Sorghum bicolor Sb01g040280 I 0.688
Pavir.Ia03856 Panicum virgatum Pavir.Ia03856 I 0.688
Si039170m.g Setaria italica Si039170m.g I 0.688
Pavir.Ib01111 Panicum virgatum Pavir.Ib01111 I 0.688
GRMZM2G015281 Zea mays GRMZM2G015281 I 0.688
GRMZM2G007406 Zea mays GRMZM2G007406 I 0.680