Bo8g092010 (Brassica oleracea)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Bo8g092010 T000936_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB2F
M06630_2.00 		Arabidopsis thaliana
YCDCCRCCGCY
RGCGGYGGHGR		 Dap-seq
OMalley et al.(2016)
AT3G57600_col_a 		0.797 0.960
PK08602.1
M01098_2.00 		Cannabis sativa
NYCACCGCYN
NRGCGGTGRN		 PBM
Lambert et al.(2019)
pTH11421 		0.758 0.900
abi4
M02648_2.00 		Zea mays
CGSYGCYBYB
VRVRGCRSCG		 SELEX
Mathelier et al.(2014)
MA0123.1 		0.679 0.800
abi4
M09706_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABI4_01 		0.679 0.800
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo8g092010.1 AP2 26 77

Links

Other AP2 family TFs
Other Brassica oleracea TFs

88 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bra007341 Brassica rapa Bra007341 I 0.819
Thhalv10006489m.g Eutrema salsugineum Thhalv10006489m.g I 0.810
Bo6g073020 Brassica oleracea Bo6g073020 I 0.802
Bo4g111040 Brassica oleracea Bo4g111040 I 0.801
Bra014617 Brassica rapa Bra014617 I 0.801
Cagra.0578s0089 Capsella grandiflora Cagra.0578s0089 I 0.797
Bostr.20903s0012 Boechera stricta Bostr.20903s0012 I 0.797
Carubv10017800m.g Capsella rubella Carubv10017800m.g I 0.797
fgenesh2_kg.5__2201__AT3G57600.1 Arabidopsis lyrata fgenesh2_kg.5__2201__AT3G57600.1 I 0.797
DREB2F Arabidopsis thaliana AT3G57600 D 0.797
Eucgr.A02390 Eucalyptus grandis Eucgr.A02390 I 0.773
evm.TU.supercontig_92.16 Carica papaya evm.TU.supercontig_92.16 I 0.773
Traes_4AS_0D75149B5 Triticum aestivum Traes_4AS_0D75149B5 I 0.773
orange1.1g042353m.g Citrus sinensis orange1.1g042353m.g I 0.771
Ciclev10005549m.g Citrus clementina Ciclev10005549m.g I 0.771
TCM_024756 Theobroma cacao TCM_024756 I 0.771
Lus10012210.g Linum usitatissimum Lus10012210.g I 0.770
POPTR_0006s05320 Populus trichocarpa POPTR_0006s05320 I 0.770
Lus10011319.g Linum usitatissimum Lus10011319.g I 0.770
VIT_08s0007g08150 Vitis vinifera VIT_08s0007g08150 I 0.768
PGSC0003DMG400023717 Solanum tuberosum PGSC0003DMG400023717 I 0.768
Ca_07264 Cicer arietinum Ca_07264 I 0.768
POPTR_0016s05360 Populus trichocarpa POPTR_0016s05360 I 0.768
SapurV1A.0018s0040 Salix purpurea SapurV1A.0018s0040 I 0.768
GLYMA19G32380 Glycine max GLYMA19G32380 I 0.768
MTR_7g092190 Medicago truncatula MTR_7g092190 I 0.768
GLYMA03G29530 Glycine max GLYMA03G29530 I 0.768
gene26463-v1.0-hybrid Fragaria vesca gene26463-v1.0-hybrid I 0.768
cassava39243.m1 Manihot esculenta cassava39243.m1 I 0.768
cassava15495.m1 Manihot esculenta cassava15495.m1 I 0.768
27810.m000639 Ricinus communis 27810.m000639 I 0.768
GLYMA14G32210 Glycine max GLYMA14G32210 I 0.765
Gorai.007G359400 Gossypium raimondii Gorai.007G359400 I 0.765
DREB2E Oryza sativa OS03G0174400 I 0.764
Pavir.Ia04341 Panicum virgatum Pavir.Ia04341 I 0.764
Pavir.Ib00517 Panicum virgatum Pavir.Ib00517 I 0.764
GRMZM2G399098 Zea mays GRMZM2G399098 I 0.764
GRMZM2G376255 Zea mays GRMZM2G376255 I 0.764
GRMZM2G419901 Zea mays GRMZM2G419901 I 0.764
ORUFI03G05330 Oryza rufipogon ORUFI03G05330 I 0.764
OBART03G05550 Oryza barthii OBART03G05550 I 0.764
OMERI03G05220 Oryza meridionalis OMERI03G05220 I 0.764
OGLUM03G05490 Oryza glumaepatula OGLUM03G05490 I 0.764
ONIVA03G05350 Oryza nivara ONIVA03G05350 I 0.764
BRADI1G72990 Brachypodium distachyon BRADI1G72990 I 0.764
BGIOSGA011963 Oryza indica BGIOSGA011963 I 0.764
GLYMA10G21850 Glycine max GLYMA10G21850 I 0.764
OPUNC03G05230 Oryza punctata OPUNC03G05230 I 0.764
GLYMA02G31350 Glycine max GLYMA02G31350 I 0.764
Cucsa.336890 Cucumis sativus Cucsa.336890 I 0.763
MDP0000703626 Malus domestica MDP0000703626 I 0.762
Pm025865 Prunus mume Pm025865 I 0.762
PRUPE_ppa009616mg Prunus persica PRUPE_ppa009616mg I 0.762
MDP0000871361 Malus domestica MDP0000871361 I 0.762
PK08602.1 Cannabis sativa PK08602.1 D 0.758
Aquca_009_00282 Aquilegia coerulea Aquca_009_00282 I 0.758
LPERR03G04860 Leersia perrieri LPERR03G04860 I 0.758
SapurV1A.0133s0330 Salix purpurea SapurV1A.0133s0330 I 0.757
Cla017778 Citrullus lanatus Cla017778 I 0.755
AMTR_s00022p00250320 Amborella trichopoda AMTR_s00022p00250320 I 0.755
chr1.CM0318.570.nd Lotus japonicus chr1.CM0318.570.nd I 0.755
SELMODRAFT_105485 Selaginella moellendorffii SELMODRAFT_105485 I 0.754
SELMODRAFT_38502 Selaginella moellendorffii SELMODRAFT_38502 I 0.754
Solyc10g080310.1 Solanum lycopersicum Solyc10g080310.1 I 0.746
e_gw1.162.74.1 Physcomitrella patens e_gw1.162.74.1 I 0.735
GLYMA19G04461 Glycine max GLYMA19G04461 I 0.724
e_gw1.292.36.1 Physcomitrella patens e_gw1.292.36.1 I 0.717
evm.TU.supercontig_1288.2 Carica papaya evm.TU.supercontig_1288.2 I 0.690
AMTR_s00039p00088760 Amborella trichopoda AMTR_s00039p00088760 I 0.686
SELMODRAFT_38483 Selaginella moellendorffii SELMODRAFT_38483 I 0.684
SELMODRAFT_27203 Selaginella moellendorffii SELMODRAFT_27203 I 0.684
Gorai.011G291900 Gossypium raimondii Gorai.011G291900 I 0.681
Pm003634 Prunus mume Pm003634 I 0.680
Pavir.J29572 Panicum virgatum Pavir.J29572 I 0.679
Pavir.J33237 Panicum virgatum Pavir.J33237 I 0.679
Pavir.J38620 Panicum virgatum Pavir.J38620 I 0.679
Sb09g016550 Sorghum bicolor Sb09g016550 I 0.679
OGLUM05G13600 Oryza glumaepatula OGLUM05G13600 I 0.679
LPERR05G10140 Leersia perrieri LPERR05G10140 I 0.679
abi4 Zea mays GRMZM2G093595 D 0.679
BGIOSGA018232 Oryza indica BGIOSGA018232 I 0.679
OMERI05G11540 Oryza meridionalis OMERI05G11540 I 0.679
ONIVA05G13490 Oryza nivara ONIVA05G13490 I 0.679
ABI4 Oryza sativa OS05G0351200 I 0.679
ORGLA05G0109500 Oryza glaberrima ORGLA05G0109500 I 0.679
OPUNC05G11000 Oryza punctata OPUNC05G11000 I 0.679
AMTR_s00007p00053050 Amborella trichopoda AMTR_s00007p00053050 I 0.678
PRUPE_ppa026176mg Prunus persica PRUPE_ppa026176mg I 0.677