Bo9g001020 (Brassica oleracea)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Bo9g001020 T000949_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF098
M01618_2.00 		Arabidopsis thaliana
NNGCCGNC
GNCGGCNN		 PBM
Weirauch et al.(2014)
pTH8259 		0.724 0.735
ERF13
M01615_2.00 		Arabidopsis thaliana
VGCCGSCD
HGSCGGCB		 PBM
Weirauch et al.(2014)
pTH7283 		0.717 0.776
ERF13
M06612_2.00 		Arabidopsis thaliana
NHDBMGCCGCCDYHD
HDRHGGCGGCKVHDN		 Dap-seq
OMalley et al.(2016)
ERF13_colamp_a 		0.717 0.776
ERF13
M06613_2.00 		Arabidopsis thaliana
HDBMGCCGCCDYHDN
NHDRHGGCGGCKVHD		 Dap-seq
OMalley et al.(2016)
ERF13_col_b 		0.717 0.776
ERF1B
M01619_2.00 		Arabidopsis thaliana
NMGCCGCCRN
NYGGCGGCKN		 PBM
Weirauch et al.(2014)
pTH8795 		0.711 0.735
ERF1B
M06626_2.00 		Arabidopsis thaliana
NHNNHDYMGCCGCCRYHDNHDNNNNNNN
NNNNNNNHDNHDRYGGCGGCKRHDNNDN		 Dap-seq
OMalley et al.(2016)
ERF1_col_a 		0.711 0.735
ERF1B
M06627_2.00 		Arabidopsis thaliana
MGCCGCCD
HGGCGGCK		 Dap-seq
OMalley et al.(2016)
ERF1_colamp_a 		0.711 0.735
ERF1B
M09703_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF1_Q2_01 		0.711 0.735
ERF1B
M09704_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF1_Q2 		0.711 0.735
ERF2_TOBAC
M09727_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF2_01 		0.678 0.714
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo9g001020.1 AP2 52 104

Links

Other AP2 family TFs
Other Brassica oleracea TFs

269 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
scaffold_604310.1 Arabidopsis lyrata scaffold_604310.1 I 0.794
Bostr.14547s0008 Boechera stricta Bostr.14547s0008 I 0.785
Cagra.4714s0001 Capsella grandiflora Cagra.4714s0001 I 0.784
Carubv10005868m.g Capsella rubella Carubv10005868m.g I 0.784
GLYMA03G26520 Glycine max GLYMA03G26520 I 0.766
Thhalv10029212m.g Eutrema salsugineum Thhalv10029212m.g I 0.759
GLYMA10G00990 Glycine max GLYMA10G00990 I 0.748
chr3.CM0080.200.nd Lotus japonicus chr3.CM0080.200.nd I 0.747
cassava19882.m1 Manihot esculenta cassava19882.m1 I 0.745
Ca_06032 Cicer arietinum Ca_06032 I 0.745
MTR_7g081805 Medicago truncatula MTR_7g081805 I 0.745
MTR_7g081815 Medicago truncatula MTR_7g081815 I 0.745
MTR_8g006825 Medicago truncatula MTR_8g006825 I 0.743
MTR_1g074310 Medicago truncatula MTR_1g074310 I 0.742
gene04917-v1.0-hybrid Fragaria vesca gene04917-v1.0-hybrid I 0.741
Cla021851 Citrullus lanatus Cla021851 I 0.741
POPTR_0014s04600 Populus trichocarpa POPTR_0014s04600 I 0.741
cassava19881.m1 Manihot esculenta cassava19881.m1 I 0.741
TCM_005707 Theobroma cacao TCM_005707 I 0.741
POPTR_0014s04610 Populus trichocarpa POPTR_0014s04610 I 0.741
evm.TU.supercontig_101.15 Carica papaya evm.TU.supercontig_101.15 I 0.740
Eucgr.E01561 Eucalyptus grandis Eucgr.E01561 I 0.740
Gorai.007G086000 Gossypium raimondii Gorai.007G086000 I 0.738
Ca_06034 Cicer arietinum Ca_06034 I 0.737
30174.m008755 Ricinus communis 30174.m008755 I 0.737
MTR_7g081795 Medicago truncatula MTR_7g081795 I 0.736
GLYMA10G33070 Glycine max GLYMA10G33070 I 0.734
GLYMA20G34560 Glycine max GLYMA20G34560 I 0.734
Eucgr.G00390 Eucalyptus grandis Eucgr.G00390 I 0.734
Eucgr.G00391 Eucalyptus grandis Eucgr.G00391 I 0.734
Eucgr.G00392 Eucalyptus grandis Eucgr.G00392 I 0.734
GLYMA03G26437 Glycine max GLYMA03G26437 I 0.732
Ca_12080 Cicer arietinum Ca_12080 I 0.732
gene04913-v1.0-hybrid Fragaria vesca gene04913-v1.0-hybrid I 0.732
Eucgr.G00388 Eucalyptus grandis Eucgr.G00388 I 0.731
PRUPE_ppb014367mg Prunus persica PRUPE_ppb014367mg I 0.730
cassava19883.m1 Manihot esculenta cassava19883.m1 I 0.730
PRUPE_ppa016903mg Prunus persica PRUPE_ppa016903mg I 0.730
Pm017696 Prunus mume Pm017696 I 0.730
POPTR_0014s04640 Populus trichocarpa POPTR_0014s04640 I 0.730
Eucgr.G00397 Eucalyptus grandis Eucgr.G00397 I 0.730
MTR_8g006815 Medicago truncatula MTR_8g006815 I 0.728
Eucgr.G00002 Eucalyptus grandis Eucgr.G00002 I 0.728
TCM_005706 Theobroma cacao TCM_005706 I 0.727
SapurV1A.0124s0170 Salix purpurea SapurV1A.0124s0170 I 0.726
Bostr.19424s0320 Boechera stricta Bostr.19424s0320 I 0.724
Cagra.8559s0002 Capsella grandiflora Cagra.8559s0002 I 0.724
ERF098 Arabidopsis thaliana AT3G23230 D 0.724
Carubv10015406m.g Capsella rubella Carubv10015406m.g I 0.724
POPTR_0014s04630 Populus trichocarpa POPTR_0014s04630 I 0.723
TRAES3BF046300130CFD_g Triticum aestivum TRAES3BF046300130CFD_g I 0.723
LjSGA_078116.1 Lotus japonicus LjSGA_078116.1 I 0.723
chr3.CM0080.80.nd Lotus japonicus chr3.CM0080.80.nd I 0.723
Bostr.19424s0319 Boechera stricta Bostr.19424s0319 I 0.723
Gorai.004G165800 Gossypium raimondii Gorai.004G165800 I 0.723
Cucsa.260040 Cucumis sativus Cucsa.260040 I 0.722
Cucsa.255330 Cucumis sativus Cucsa.255330 I 0.721
chr3.CM0080.270.nc Lotus japonicus chr3.CM0080.270.nc I 0.720
Pm017699 Prunus mume Pm017699 I 0.720
cassava41639.m1 Manihot esculenta cassava41639.m1 I 0.719
Eucgr.G00943 Eucalyptus grandis Eucgr.G00943 I 0.718
ATERF13 Arabidopsis lyrata scaffold_403422.1 I 0.717
orange1.1g044584m.g Citrus sinensis orange1.1g044584m.g I 0.717
Bo4g195220 Brassica oleracea Bo4g195220 I 0.717
Bo4g024140 Brassica oleracea Bo4g024140 I 0.717
Cagra.0239s0035 Capsella grandiflora Cagra.0239s0035 I 0.717
ERF13 Arabidopsis thaliana AT2G44840 D 0.717
TCM_005705 Theobroma cacao TCM_005705 I 0.717
Bra037630 Brassica rapa Bra037630 I 0.717
gene21165-v1.0-hybrid Fragaria vesca gene21165-v1.0-hybrid I 0.717
Thhalv10001758m.g Eutrema salsugineum Thhalv10001758m.g I 0.717
Carubv10023967m.g Capsella rubella Carubv10023967m.g I 0.717
Bra004873 Brassica rapa Bra004873 I 0.717
Gorai.008G108500 Gossypium raimondii Gorai.008G108500 I 0.715
PRUPE_ppa016384mg Prunus persica PRUPE_ppa016384mg I 0.715
Pm003579 Prunus mume Pm003579 I 0.715
POPTR_0005s24450 Populus trichocarpa POPTR_0005s24450 I 0.714
fgenesh2_kg.471__1__AT3G23230.1 Arabidopsis lyrata fgenesh2_kg.471__1__AT3G23230.1 I 0.714
fgenesh2_kg.3__2538__AT3G23230.1 Arabidopsis lyrata fgenesh2_kg.3__2538__AT3G23230.1 I 0.714
Lus10016210.g Linum usitatissimum Lus10016210.g I 0.712
SELMODRAFT_37123 Selaginella moellendorffii SELMODRAFT_37123 I 0.711
Bra023746 Brassica rapa Bra023746 I 0.711
Cagra.8559s0001 Capsella grandiflora Cagra.8559s0001 I 0.711
Carubv10014553m.g Capsella rubella Carubv10014553m.g I 0.711
SELMODRAFT_80895 Selaginella moellendorffii SELMODRAFT_80895 I 0.711
ERF1B Arabidopsis thaliana AT3G23240 D 0.711
Bra023745 Brassica rapa Bra023745 I 0.711
SapurV1A.0094s0620 Salix purpurea SapurV1A.0094s0620 I 0.711
SapurV1A.0233s0380 Salix purpurea SapurV1A.0233s0380 I 0.711
MTR_4g088005 Medicago truncatula MTR_4g088005 I 0.711
POPTR_0001s11770 Populus trichocarpa POPTR_0001s11770 I 0.711
SapurV1A.1065s0020 Salix purpurea SapurV1A.1065s0020 I 0.711
ERF1 Arabidopsis lyrata scaffold_302806.1 I 0.711
Bo1g102210 Brassica oleracea Bo1g102210 I 0.711
Solyc09g066350.1 Solanum lycopersicum Solyc09g066350.1 I 0.710
GLYMA18G48741 Glycine max GLYMA18G48741 I 0.710
Eucgr.B01541 Eucalyptus grandis Eucgr.B01541 I 0.710
gene16619-v1.0-hybrid Fragaria vesca gene16619-v1.0-hybrid I 0.710
Lus10029331.g Linum usitatissimum Lus10029331.g I 0.710
PGSC0003DMG400010309 Solanum tuberosum PGSC0003DMG400010309 I 0.710
mgf021215m Mimulus guttatus mgf021215m I 0.708
Lus10016209.g Linum usitatissimum Lus10016209.g I 0.708
30174.m008756 Ricinus communis 30174.m008756 I 0.708
Eucgr.G00396 Eucalyptus grandis Eucgr.G00396 I 0.708
Eucgr.G00394 Eucalyptus grandis Eucgr.G00394 I 0.708
Eucgr.G00393 Eucalyptus grandis Eucgr.G00393 I 0.708
Ca_00359 Cicer arietinum Ca_00359 I 0.708
Thhalv10022374m.g Eutrema salsugineum Thhalv10022374m.g I 0.707
Cucsa.260030 Cucumis sativus Cucsa.260030 I 0.707
GLYMA03G26394 Glycine max GLYMA03G26394 I 0.707
PRUPE_ppa020642mg Prunus persica PRUPE_ppa020642mg I 0.706
Pm020605 Prunus mume Pm020605 I 0.706
gene08075-v1.0-hybrid Fragaria vesca gene08075-v1.0-hybrid I 0.706
Bra032665 Brassica rapa Bra032665 I 0.705
Bo8g118250 Brassica oleracea Bo8g118250 I 0.705
Lus10029334.g Linum usitatissimum Lus10029334.g I 0.705
30174.m008759 Ricinus communis 30174.m008759 I 0.704
GLYMA18G48730 Glycine max GLYMA18G48730 I 0.704
MDP0000830129 Malus domestica MDP0000830129 I 0.703
GLYMA09G37780 Glycine max GLYMA09G37780 I 0.703
MDP0000930655 Malus domestica MDP0000930655 I 0.701
GLYMA03G26310 Glycine max GLYMA03G26310 I 0.701
PGSC0003DMG400010724 Solanum tuberosum PGSC0003DMG400010724 I 0.700
VIT_10s0003g00580 Vitis vinifera VIT_10s0003g00580 I 0.700
Lus10029333.g Linum usitatissimum Lus10029333.g I 0.700
evm.TU.supercontig_101.16 Carica papaya evm.TU.supercontig_101.16 I 0.700
Lus10016212.g Linum usitatissimum Lus10016212.g I 0.700
Solyc02g077370.1 Solanum lycopersicum Solyc02g077370.1 I 0.700
OMERI03G03710 Oryza meridionalis OMERI03G03710 I 0.699
POPTR_0014s04620 Populus trichocarpa POPTR_0014s04620 I 0.699
LPERR02G21480 Leersia perrieri LPERR02G21480 I 0.699
Lus10025430.g Linum usitatissimum Lus10025430.g I 0.699
Ca_17211 Cicer arietinum Ca_17211 I 0.698
GLYMA13G30720 Glycine max GLYMA13G30720 I 0.698
mgf026487m Mimulus guttatus mgf026487m I 0.698
e_gw1.487.2.1 Physcomitrella patens e_gw1.487.2.1 I 0.698
GLYMA15G08560 Glycine max GLYMA15G08560 I 0.698
MTR_2g015040 Medicago truncatula MTR_2g015040 I 0.698
Lus10016225.g Linum usitatissimum Lus10016225.g I 0.698
OBART02G26470 Oryza barthii OBART02G26470 I 0.697
BGIOSGA008740 Oryza indica BGIOSGA008740 I 0.697
Pavir.Aa01181 Panicum virgatum Pavir.Aa01181 I 0.697
Pavir.Ab02473 Panicum virgatum Pavir.Ab02473 I 0.697
ONIVA02G28840 Oryza nivara ONIVA02G28840 I 0.697
mgf001695m Mimulus guttatus mgf001695m I 0.697
Cucsa.388540 Cucumis sativus Cucsa.388540 I 0.697
OPUNC02G24090 Oryza punctata OPUNC02G24090 I 0.697
ORUFI02G27860 Oryza rufipogon ORUFI02G27860 I 0.697
OGLUM02G26870 Oryza glumaepatula OGLUM02G26870 I 0.697
Cla015065 Citrullus lanatus Cla015065 I 0.697
GRMZM2G057386 Zea mays GRMZM2G057386 I 0.697
29900.m001559 Ricinus communis 29900.m001559 I 0.697
Lus10006579.g Linum usitatissimum Lus10006579.g I 0.697
ORGLA02G0226700 Oryza glaberrima ORGLA02G0226700 I 0.697
Si017790m.g Setaria italica Si017790m.g I 0.697
Eucgr.E02651 Eucalyptus grandis Eucgr.E02651 I 0.696
Eucgr.E03168 Eucalyptus grandis Eucgr.E03168 I 0.696
mgf021973m Mimulus guttatus mgf021973m I 0.696
OBART04G05450 Oryza barthii OBART04G05450 I 0.695
ORUFI04G06330 Oryza rufipogon ORUFI04G06330 I 0.695
OS04G0257500 Oryza sativa OS04G0257500 I 0.695
POPTR_0004s05100 Populus trichocarpa POPTR_0004s05100 I 0.695
Lus10016224.g Linum usitatissimum Lus10016224.g I 0.695
BGIOSGA015474 Oryza indica BGIOSGA015474 I 0.695
OGLUM04G04620 Oryza glumaepatula OGLUM04G04620 I 0.695
ONIVA04G03680 Oryza nivara ONIVA04G03680 I 0.695
Gorai.007G046000 Gossypium raimondii Gorai.007G046000 I 0.695
Lus10029318.g Linum usitatissimum Lus10029318.g I 0.695
OLONG_027600 Oryza longistaminata OLONG_027600 I 0.695
cassava1608.valid.m1 Manihot esculenta cassava1608.valid.m1 I 0.695
ORGLA04G0041100 Oryza glaberrima ORGLA04G0041100 I 0.695
PK28774.1 Cannabis sativa PK28774.1 I 0.695
OB04G14270 Oryza brachyantha OB04G14270 I 0.695
SapurV1A.0012s0890 Salix purpurea SapurV1A.0012s0890 I 0.695
mgf018935m Mimulus guttatus mgf018935m I 0.695
Aquca_005_00143 Aquilegia coerulea Aquca_005_00143 I 0.695
MDP0000189033 Malus domestica MDP0000189033 I 0.694
Cla015064 Citrullus lanatus Cla015064 I 0.694
MDP0000133485 Malus domestica MDP0000133485 I 0.694
Ciclev10016995m.g Citrus clementina Ciclev10016995m.g I 0.694
LPERR04G03550 Leersia perrieri LPERR04G03550 I 0.694
MDP0000907929 Malus domestica MDP0000907929 I 0.694
orange1.1g031071m.g Citrus sinensis orange1.1g031071m.g I 0.694
Thhalv10022108m.g Eutrema salsugineum Thhalv10022108m.g I 0.693
Eucgr.H04254 Eucalyptus grandis Eucgr.H04254 I 0.693
MDP0000178398 Malus domestica MDP0000178398 I 0.693
LPERR03G35710 Leersia perrieri LPERR03G35710 I 0.692
AMTR_s00021p00185480 Amborella trichopoda AMTR_s00021p00185480 I 0.692
Bo7g040810 Brassica oleracea Bo7g040810 I 0.691
Lus10014655.g Linum usitatissimum Lus10014655.g I 0.691
Bra014925 Brassica rapa Bra014925 I 0.691
Gorai.001G252900 Gossypium raimondii Gorai.001G252900 I 0.690
CM1489.90.nc Lotus japonicus CM1489.90.nc I 0.690
Gorai.001G252700 Gossypium raimondii Gorai.001G252700 I 0.690
TCM_029773 Theobroma cacao TCM_029773 I 0.689
Cla021383 Citrullus lanatus Cla021383 I 0.689
VIT_15s0021g01630 Vitis vinifera VIT_15s0021g01630 I 0.688
VIT_07s0005g03220 Vitis vinifera VIT_07s0005g03220 I 0.688
Lus10030261.g Linum usitatissimum Lus10030261.g I 0.688
VIT_16s0013g01110 Vitis vinifera VIT_16s0013g01110 I 0.688
Lus10016223.g Linum usitatissimum Lus10016223.g I 0.688
cassava47034.m1 Manihot esculenta cassava47034.m1 I 0.688
mgf020878m Mimulus guttatus mgf020878m I 0.688
chr3.CM0080.190.nd Lotus japonicus chr3.CM0080.190.nd I 0.688
VIT_16s0013g01090 Vitis vinifera VIT_16s0013g01090 I 0.688
Lus10004011.g Linum usitatissimum Lus10004011.g I 0.688
VIT_16s0013g01000 Vitis vinifera VIT_16s0013g01000 I 0.688
Gorai.007G145700 Gossypium raimondii Gorai.007G145700 I 0.687
Cucsa.129320 Cucumis sativus Cucsa.129320 I 0.687
GLYMA07G14070 Glycine max GLYMA07G14070 I 0.686
Gorai.001G051300 Gossypium raimondii Gorai.001G051300 I 0.685
Ciclev10006784m.g Citrus clementina Ciclev10006784m.g I 0.683
orange1.1g048608m.g Citrus sinensis orange1.1g048608m.g I 0.683
TCM_004062 Theobroma cacao TCM_004062 I 0.683
MDP0000286915 Malus domestica MDP0000286915 I 0.683
VIT_16s0013g00890 Vitis vinifera VIT_16s0013g00890 I 0.682
PRUPE_ppa025748mg Prunus persica PRUPE_ppa025748mg I 0.681
MDP0000310904 Malus domestica MDP0000310904 I 0.681
MDP0000805422 Malus domestica MDP0000805422 I 0.681
POPTR_0002s04030 Populus trichocarpa POPTR_0002s04030 I 0.681
MDP0000689946 Malus domestica MDP0000689946 I 0.681
Bo1g102220 Brassica oleracea Bo1g102220 I 0.681
MDP0000236605 Malus domestica MDP0000236605 I 0.681
PRUPE_ppa012014mg Prunus persica PRUPE_ppa012014mg I 0.681
Bra023748 Brassica rapa Bra023748 I 0.681
Pm010368 Prunus mume Pm010368 I 0.681
Ca_23626 Cicer arietinum Ca_23626 I 0.681
GSMUA_Achr1G15350_001 Musa acuminata GSMUA_Achr1G15350_001 I 0.681
MTR_1g070070 Medicago truncatula MTR_1g070070 I 0.681
29584.m000235 Ricinus communis 29584.m000235 I 0.680
PGSC0003DMG400016006 Solanum tuberosum PGSC0003DMG400016006 I 0.680
Eucgr.E01571 Eucalyptus grandis Eucgr.E01571 I 0.680
GLYMA20G16910 Glycine max GLYMA20G16910 I 0.680
GLYMA10G23440 Glycine max GLYMA10G23440 I 0.680
evm.TU.supercontig_50.29 Carica papaya evm.TU.supercontig_50.29 I 0.680
Lus10029319.g Linum usitatissimum Lus10029319.g I 0.680
Solyc05g052050.1 Solanum lycopersicum Solyc05g052050.1 I 0.680
Lus10011830.g Linum usitatissimum Lus10011830.g I 0.680
Cucsa.201950 Cucumis sativus Cucsa.201950 I 0.679
PGSC0003DMG400045092 Solanum tuberosum PGSC0003DMG400045092 I 0.679
CM0905.90.nd Lotus japonicus CM0905.90.nd I 0.679
evm.TU.supercontig_44.73 Carica papaya evm.TU.supercontig_44.73 I 0.679
Gorai.001G051200 Gossypium raimondii Gorai.001G051200 I 0.679
30147.m014331 Ricinus communis 30147.m014331 I 0.679
ERF2_TOBAC Nicotiana tabacum ERF2_TOBAC D 0.678
POPTR_0003s15030 Populus trichocarpa POPTR_0003s15030 I 0.678
cassava19171.valid.m1 Manihot esculenta cassava19171.valid.m1 I 0.678
VIT_16s0013g00980 Vitis vinifera VIT_16s0013g00980 I 0.678
TCM_014845 Theobroma cacao TCM_014845 I 0.678
TCM_004061 Theobroma cacao TCM_004061 I 0.678
PRUPE_ppa010186mg Prunus persica PRUPE_ppa010186mg I 0.678
Gorai.001G176700 Gossypium raimondii Gorai.001G176700 I 0.678
VIT_16s0013g00970 Vitis vinifera VIT_16s0013g00970 I 0.678
VIT_16s0013g00950 Vitis vinifera VIT_16s0013g00950 I 0.678
Pm019546 Prunus mume Pm019546 I 0.678
BGIOSGA011868 Oryza indica BGIOSGA011868 I 0.677
GSMUA_Achr8G19850_001 Musa acuminata GSMUA_Achr8G19850_001 I 0.677
ONIVA03G03670 Oryza nivara ONIVA03G03670 I 0.677
OLONG_008277 Oryza longistaminata OLONG_008277 I 0.677
ORGLA03G0036700 Oryza glaberrima ORGLA03G0036700 I 0.677
ORUFI03G03630 Oryza rufipogon ORUFI03G03630 I 0.677
OS03G0150200 Oryza sativa OS03G0150200 I 0.677
OGLUM03G03790 Oryza glumaepatula OGLUM03G03790 I 0.677
OBART03G03890 Oryza barthii OBART03G03890 I 0.677
MDP0000153445 Malus domestica MDP0000153445 I 0.677
Eucgr.E00378 Eucalyptus grandis Eucgr.E00378 I 0.677
LPERR03G03540 Leersia perrieri LPERR03G03540 I 0.677
MTR_8g006840 Medicago truncatula MTR_8g006840 I 0.677
MDP0000317950 Malus domestica MDP0000317950 I 0.677