Bo9g028820 (Brassica oleracea)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Bo9g028820 T000956_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT1G63040
M06590_2.00 		Arabidopsis thaliana
TTGAAA
TTTCAA		 Dap-seq
OMalley et al.(2016)
AT1G63040_col_a 		0.725 0.959
ERF027
M06566_2.00 		Arabidopsis thaliana
NNNNNNHNNHNYYRCCGACAN
NTGTCGGYRRNDNNDNNNNNN		 Dap-seq
OMalley et al.(2016)
AT1G12630_col_a 		0.688 0.857
ERF027
M06567_2.00 		Arabidopsis thaliana
NNYYRCCGACANHNNN
NNNDNTGTCGGYRRNN		 Dap-seq
OMalley et al.(2016)
AT1G12630_colamp_a 		0.688 0.857
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo9g028820.1 AP2 15 65

Links

Other AP2 family TFs
Other Brassica oleracea TFs

Invalid Input OrderBy

40 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action