Bo9g036590 (Brassica oleracea)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Bo9g036590 T000958_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT1G63040
M06590_2.00 		Arabidopsis thaliana
TTGAAA
TTTCAA		 Dap-seq
OMalley et al.(2016)
AT1G63040_col_a 		0.729 0.939
ERF027
M06566_2.00 		Arabidopsis thaliana
NNNNNNHNNHNYYRCCGACAN
NTGTCGGYRRNDNNDNNNNNN		 Dap-seq
OMalley et al.(2016)
AT1G12630_col_a 		0.708 0.878
ERF027
M06567_2.00 		Arabidopsis thaliana
NNYYRCCGACANHNNN
NNNDNTGTCGGYRRNN		 Dap-seq
OMalley et al.(2016)
AT1G12630_colamp_a 		0.708 0.878
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo9g036590.1 AP2 82 132

Links

Other AP2 family TFs
Other Brassica oleracea TFs

29 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30147.m014311 Ricinus communis 30147.m014311 I 0.752
Al_scaffold_0002_210 Arabidopsis lyrata Al_scaffold_0002_210 I 0.749
Al_scaffold_0240_1 Arabidopsis lyrata Al_scaffold_0240_1 I 0.749
Bra027616 Brassica rapa Bra027616 I 0.736
Bra027615 Brassica rapa Bra027615 I 0.736
Aquca_013_00433 Aquilegia coerulea Aquca_013_00433 I 0.733
Thhalv10009659m.g Eutrema salsugineum Thhalv10009659m.g I 0.730
Carubv10012147m.g Capsella rubella Carubv10012147m.g I 0.730
AT1G63040 Arabidopsis thaliana AT1G63040 D 0.729
Bo9g028820 Brassica oleracea Bo9g028820 I 0.727
Carubv10022214m.g Capsella rubella Carubv10022214m.g I 0.726
Cagra.6357s0007 Capsella grandiflora Cagra.6357s0007 I 0.726
Cagra.0568s0175 Capsella grandiflora Cagra.0568s0175 I 0.725
fgenesh1_pm.C_scaffold_1001063 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1001063 I 0.724
scaffold_101390.1 Arabidopsis lyrata scaffold_101390.1 I 0.724
TCM_016176 Theobroma cacao TCM_016176 I 0.723
Bostr.13671s0198 Boechera stricta Bostr.13671s0198 I 0.722
Solyc08g080290.2 Solanum lycopersicum Solyc08g080290.2 I 0.722
PGSC0003DMG400022759 Solanum tuberosum PGSC0003DMG400022759 I 0.722
Cla011673 Citrullus lanatus Cla011673 I 0.721
Cucsa.302760 Cucumis sativus Cucsa.302760 I 0.716
ERF027 Arabidopsis thaliana AT1G12630 D 0.708
MDP0000189347 Malus domestica MDP0000189347 I 0.701
Cla004491 Citrullus lanatus Cla004491 I 0.699
Gorai.003G162600 Gossypium raimondii Gorai.003G162600 I 0.695
Bra016761 Brassica rapa Bra016761 I 0.684
Bo8g064940 Brassica oleracea Bo8g064940 I 0.684
Thhalv10023678m.g Eutrema salsugineum Thhalv10023678m.g I 0.682
PGSC0003DMG400012527 Solanum tuberosum PGSC0003DMG400012527 I 0.681