CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo9g104780
(
Brassica oleracea
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
Bo9g104780
T000964_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ERF025
M06680_2.00
Arabidopsis thaliana
NNNYYGCCGACANHN
NDNTGTCGGCRRNNN
Dap-seq
OMalley et al.(2016)
Rap210_col_a
0.737
0.979
ERF025
M06681_2.00
Arabidopsis thaliana
NNNYNRCCGACANN
NNTGTCGGYNRNNN
Dap-seq
OMalley et al.(2016)
Rap210_colamp_a
0.737
0.979
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo9g104780.1
AP2
74
122
LRGIRLRNGKWVSEIREPRKTTRIWLGTYPVPEMAAAAYDVAALALKGP
Links
Other
AP2
family TFs
Other
Brassica oleracea
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy